University of Rostock

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Rat connectome



Granular cell layer of the olfactory bulb left


Abbreviation
OBgra
Color       
Superior regionsOlfactory cortex layers

SynonymsAbbr.Language
Granular cell layer olfactory bulbGrO 
Layer 6 of the olfactory cortex  
Layer VI of the olfactory cortex  
Granule cell layer of the olfactory bulb  
Olfactory bulb granule cell layer  
Granular cell layer of the olfactory bulbOBgraEng
Olfactory bulb granule layer  

SubregionsSide
Superficial portion of the granular cell layer of the olfactory bulbleft
Lateral granule cell layer of the olfactory bulbleft
Medial granule cell layer of the olfactory bulbleft
Cellular layers of the bottom of the granule cell layer of the olfactory bulbleft
Internal granular cell layer of the olfactory bulbleft
External granular cell layer of the olfactory bulbleft
Deep granular cell layer of the olfactory bulbleft
Inframitral short axon cells in the granular cell layer of the olfactory bulbleft

Output to

NameSideAbbr.WeightDetails
Suprachiasmatic nucleusipsiSCh2
Olfactory bulb A16ipsiMOB-0.5
External plexiform layer of the olfactory bulbipsiOBepl3
Glomerular layer of the olfactory bulbipsiOBglo3
Granular cell layer of the olfactory bulbipsiOBgra3
Superficial portion of the granular cell layer of the olfactory bulbipsiOBsgra3
Internal plexiform layer of the olfactory bulbipsiOBipl3
Mitral cell layer of the olfactory bulbipsiMi-0.5
Mitral cells of the olfactory bulbipsiMiC-0.5
Rostral olfactory cortexipsiROcx1
Lateral olfactory tractipsilot-0.5

Input from

NameSideAbbr.WeightDetails
Substantia nigra compact partipsiSNC-0.5
Substantia nigra medial partipsiSNM2
Ventral tegmental area A10ipsiVTA2
Laterodorsal tegmental nucleusipsiLDTg-0.5
Locus coeruleusipsiLC-0.5
Locus coeruleus rostral two thirdsipsiLCRott-0.5
Trigeminal ganglion cellsipsi5GnC-0.5
Ethmoid nerve region in the trigeminal ganglionipsi5GnEnr-0.5
Raphe nucleiipsiRAN0
Dorsal raphe nucleusipsiDR1
Dorsal raphe nucleus lateral partipsiDRLa-0.5
Dorsal raphe nucleus lateral wingipsiDRlw-0.5
Dorsal raphe nucleus medial partipsiDRNM-0.5
Dorsal raphe nucleus rostral partipsiDRr-0.5
Dorsal raphe nucleus ventral partipsiDRV1
Dorsal raphe nucleus ventral wingipsiDRVW-0.5
Dorsal raphe nucleus ventromedial subdivisionipsiDRvme-0.5
Dorsal raphe nucleus posterior partipsiDRPO-0.5
Dorsal raphe nucleus ventroposterioripsiDRVP-0.5
Median raphe nucleusipsiMnR1
Central raphe nucleusipsiCRN-0.5
Basal forebrainipsiBAF-0.5
Diagonal band of BrocaipsiDBB2
Lateral part of the nucleus of the horizontal limb of the diagonal bandipsiLPHDB4
Nucleus of the horizontal limb of the diagonal band caudomedial partipsiHDBcm-0.5
Nucleus of the vertical limb of the diagonal band rostral partipsiVDBR-0.5
Substantia innominataipsiSI1
Magnocellular preoptic nucleus lateral partipsiMCPOL4
Preoptic region caudal partipsiPREOC2
Retrochiasmatic area rostral partipsiRChR0
Cortex amygdala transition zoneipsiCxA1
Anterior amygdaloid areaipsiAA2
Anterior cortical amygdaloid nucleusipsiACo1
Posterolateral cortical nucleusipsiPLCo1
Nucleus of the lateral olfactory tractipsiLOT1
Nucleus of the lateral olfactory tract layer 2ipsiLOTL23
Nucleus of the lateral olfactory tract layer 3ipsiLOTL31
Medial amygdaloid nucleus anterodorsal partipsiMeAD1
Subiculum ventral partipsiSv0
Dorsolateral entorhinal cortexipsiDLEnt2.5
Lateral entorhinal cortexipsiLEnt1
Anterior piriform cortexipsiAPIRC2.5
Anterior piriform cortex ventrolateral partipsiAPIRCvL3
Caudal piriform cortexipsiPirC1
Piriform cortex layer 2ipsiPirL2-0.5
Piriform cortex layer 3ipsiPirL3-0.5
Rostral piriform cortexipsiPirR2
Most rostral part of the piriform cortex layer 2ipsiPirRmRL22
Most rostral part of the piriform cortex layer 3ipsiPirRmRL32
Olfactory bulb A16ipsiMOB3
Granular cell layer of the olfactory bulbipsiOBgra3
Mitral cells of the olfactory bulbipsiMiC-0.5
Anterior olfactory nucleusipsiAON2
Anterior olfactory nucleus lateral partipsiAONl3
Olfactory tubercleipsiTuO2
Anterior olfactory nucleus external partcontraAONe3
Nasal cavityipsiOrgNaCa-0.5
Olfactory epitheliumipsiOLfEpi1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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