University of Rostock

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Rat connectome



Mitral cell layer of the olfactory bulb left


Abbreviation
Mi
Color       
Superior regionsOlfactory cortex layers

SynonymsAbbr.Language
Layer 4 of the olfactory cortex  
Layer IV of the olfactory cortex  
Mitral cell layer of the olfactory bulbMiEng

SubregionsSide
Mitral cells of the olfactory bulbleft
Ventral mitral cell layer of the olfactory bulbleft

Output to

NameSideAbbr.WeightDetails
Basal forebrainipsiBAF3
Deep endopiriform nucleusipsiEnND3
Suprachiasmatic nucleusipsiSCh2
Amygdaloid complexipsiAC0
Cortex amygdala transition zone layer 1aipsiCxA1a-0.5
Anterior amygdaloid areaipsiAA-0.5
Cortical amygdaloid nucleusipsiCAn-0.5
Anterior cortical amygdaloid nucleusipsiACo-0.5
Posterior amygdaloid nucleusipsiCOAp0
Posterolateral cortical nucleusipsiPLCo-0.5
Medial amygdaloid nucleusipsiMe2.5
Medial amygdaloid nucleus anterior partipsiMeAn0.5
Amygdalohippocampal areaipsiAHi2.5
Entorhinal cortexipsiEnt0
Lateral entorhinal cortexipsiLEnt-0.5
Lateral entorhinal cortex caudal layer 1aipsiLEntCL1a-0.5
Piriform cortexipsiPir3
Caudal piriform cortexipsiPirC-0.5
Piriform cortex layer 1aipsiPir1a-0.5
Olfactory bulb A16ipsiMOB-0.5
Anterior dorsomedially olfactory bulb A16ipsiMOBadm-0.5
Anterior dorsolaterally olfactory bulbipsiMOBDLA-0.5
Superficial external plexiform layer of the olfactory bulbipsiOBsepl1
Deep external plexiform layer of the olfactory bulbipsiOBepld-0.5
Tufted cells of the glomerular layer of the olfactory bulbipsiOBgloTC3
Mitral cell layer of the olfactory bulbipsiMi3
Posterior olfactory cortexipsiOCOP-0.5
Rostral olfactory cortexipsiROcx3
Anterior olfactory nucleusipsiAON3
Anterior olfactory nucleus dorsal partipsiAONd3
Anterior olfactory nucleus external partipsiAONe3
Dorsoventral extent of the anterior olfactory nucleus pars externaipsiAONeDV1
Rostrocaudal extent of the anterior olfactory nucleus pars externaipsiAONeRC1
Anterior olfactory nucleus lateral partipsiAONl3
Anterior olfactory nucleus layer 1aipsiAONL1a3
Anterior olfactory nucleus layer 1bipsiAONL1b3
Anterior olfactory nucleus medial partipsiAONm3
Anterior olfactory nucleus posteroventral partipsiAONpv3
Lateral olfactory tractipsilot-0.5
Olfactory peduncleipsiOLP3
Olfactory tubercleipsiTuO3
Olfactory tubercle layer 1aipsiTuOLa1a3
Olfactory tubercle posteromedial partipsiTuOpm-0.5
Lateral entorhinal cortexcontraLEnt0
Caudal piriform cortexcontraPirC0
Rostral olfactory cortexcontraROcx0
Olfactory tubercle posteromedial partcontraTuOpm0

Input from

NameSideAbbr.WeightDetails
Substantia nigra medial partipsiSNM2
Ventral tegmental area A10ipsiVTA2
Locus coeruleusipsiLC-0.5
Trigeminal ganglion cellsipsi5GnC-0.5
Ethmoid nerve region in the trigeminal ganglionipsi5GnEnr-0.5
Anterior piriform cortexipsiAPIRC3
External plexiform layer of the olfactory bulbipsiOBepl3
Tufted cells of the glomerular layer of the olfactory bulbipsiOBgloTC3
Granular cell layer of the olfactory bulbipsiOBgra-0.5
Mitral cell layer of the olfactory bulbipsiMi3
Posterior olfactory cortexipsiOCOP-0.5
Anterior olfactory nucleus lateral partipsiAONl3
Anterior olfactory nucleus posteroventral partipsiAONpv0
Anterior olfactory nucleus posteroventral partcontraAONpv0
Nasal cavityipsiOrgNaCa-0.5
Olfactory epitheliumipsiOLfEpi3

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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