University of Rostock

Department of Anatomy

Neuroscience Group

  Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Dorsal raphe nucleus ventral part left


Abbreviation
DRV
Color       
Superior regionsDorsal raphe nucleus

SynonymsAbbr.Language
Dorsal raphe nucleus ventral partDRVEng
Dorsal raphe nucleus ventral partDRvEng
Dorsal raphe nucleus ventral fountain portion Eng

SubregionsSide
Dorsal raphe nucleus ventral halfleft
Dorsal raphe nucleus ventral part non serotoninergic populationleft
Dorsal raphe nucleus ventral part serotoninergic populationleft
Ventral fountain portion of the dorsal raphe nucleusleft
Dorsal raphe nucleus ventral wingleft

Output to

NameSideAbbr.WeightDetails
Dorsal periaqueductal grayipsiDPAG1
Ventrolateral periaqueductal grayipsiVLPAG0.5
Substantia nigra A9 dorsal halfipsiSNDh1
Facial nucleusipsi73
Principal sensory trigeminal nucleusipsiPr53
Dorsal raphe nucleusipsiDR-0.5
Midline apneic siteipsiMAS2
Diagonal band of BrocaipsiDBB-0.5
Medial septal nucleusipsiMS-0.5
Preoptic regionipsiPREO0.5
Medial preoptic nucleusipsiMPO1
Ventromedial hypothalamic nucleusipsiVMH0.5
Anteroventral thalamic nucleusipsiAV0
Central medial thalamic nucleusipsiCM3
Centrolateral thalamic nucleusipsiCL2
Paracentral thalamic nucleus caudal partipsiPC-c2
Paracentral thalamic nucleus rostral partipsiPC-r1
Parafascicular thalamic nucleus lateral partipsiPFL4
Parafascicular thalamic nucleus medial partipsiPFM4
Rhomboid thalamic nucleusipsiRh3
Mediodorsal thalamic nucleusipsiMD3
Intermediodorsal thalamic nucleusipsiIMD2
Submedius thalamic nucleusipsiSub2
Paratenial thalamic nucleusipsiPT2
Paraventricular thalamic nucleus anterior partipsiPVA3
Paraventricular thalamic nucleus medial partipsiPVM2
Paraventricular thalamic nucleus posterior partipsiPVP2
Reuniens thalamic nucleusipsiRe3
Ventrolateral thalamic nucleusipsiVL3
Ventral posterior thalamic nucleus parvicellular partipsiVPPC1
Ventral posteromedial thalamic nucleusipsiVPM3
Ventromedial thalamic nucleus caudal partipsiVMc2
Oval paracentral thalamic nucleusipsiOPC2
Lateral habenular nucleusipsiLHb3
Amygdaloid complexipsiAC-0.5
Basolateral amygdaloid nucleusipsiBL3
Basolateral amygdaloid nucleus ventral partipsiBLve3
Posterior basolateral nucleusipsiBLP3
Anterior basomedial nucleusipsiBMA3
Posterior basomedial nucleusipsiBMP3
Central amygdaloid nucleusipsiCe2
Medial amygdaloid nucleusipsiMe0.5
Accumbens nucleus shellipsiAcbSh-0.5
Dorsomedial shellipsiAcbShdm-10
Caudate putamenipsiCPu1
Subthalamic nucleusipsiSTh3
Cerebral cortexipsiCEC-0.5
HippocampusipsiHIPP1
Field CA3 of hippocampusipsiCA3-0.5
Anterior piriform cortexipsiAPIRC1
Posterior piriform cortexipsiPPIRC1
Insular cortexipsiICX-0.5
Prefrontal cortex dorsolateral partipsiPFCd-0.5
Prefrontal cortex dorsomedial partipsiPFCdm-0.5
Somatomotoric regionsipsiSMR3
Motoric regionsipsiM3
Lateral agranular prefrontal cortexipsiAGl2
Primary somatosensory cortexipsiS12
Ventral prefrontal cortexipsiVPFC-0.5
Prefrontal cortex dorsal partipsiPFCdo-0.5
Visual regionsipsiVR3
Glomerular layer of the olfactory bulbipsiOBglo1
Granular cell layer of the olfactory bulbipsiOBgra1
Lateral septal nucleusipsiLS0.5
Lateral septal nucleus dorsal partipsiLSD1
Intermediolateral septal areaipsiSERimL2
Facial nucleuscontra71
Principal sensory trigeminal nucleuscontraPr51
Midline apneic sitecontraMAS2
Preoptic regioncontraPREO0.5
Medial preoptic nucleuscontraMPO-0.5
Ventromedial hypothalamic nucleuscontraVMH0.5
Ventrolateral thalamic nucleuscontraVL1.5
Ventral posteromedial thalamic nucleuscontraVPM1.5
Accumbens nucleus shellcontraAcbSh-0.5
Caudate putamencontraCPu-0.5
Lateral septal nucleuscontraLS0.5

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG3
Central gray dorsal partipsiCGD0
Central gray lateral partipsiCGL2
Central gray lateral ventral partipsiCGVD3
Central gray ventral areaipsiCGva3
Central grey caudal areaipsicCG1
Central gray dorsolateral partipsiCGDL1
Ventrolateral periaqueductal grayipsiVLPAG1
Superior colliculusipsiSC1
Dorsal tegmental bundleipsidtg-2
Peduncularpontine nucleusipsiPPN1
Rostromedial tegmental nucleusipsiRMTg1
Substantia nigra compact partipsiSNC2
Substantia nigra lateral partipsiSNL0.5
Substantia nigra reticular partipsiSNR2
Ventral tegmental area A10ipsiVTA1
Laterodorsal tegmental nucleusipsiLDTg2
Barringtons nucleusipsiBar1
Locus coeruleusipsiLC1
Dorsomedial tegmental areaipsiDMTg1
Prepositus nucleusipsiPr0.5
Mesencephalic reticular formationipsiMRF4
Pontine reticular nucleus oral partipsiPnO3
Pontine reticular nucleus ventral partipsiPnV0.5
Pontine reticular nucleus caudal partipsiPNC1
Koelliker Fuse nucleusipsiKF1
Lateral parabrachial nucleusipsiLPB4
Parabrachial nucleus medialipsiPBnMe2
Gigantocellular reticular nucleusipsiGi1
Gigantocellular reticular nucleus alpha partipsiGiA1
Gigantocellular reticular nucleus ventral partipsiGiV0.5
Medullary reticular nucleusipsiMdD1
Parvicellular reticular nucleusipsiPCRt1
Parvicellular reticular nucleus alpha partipsiPCRtA1
Subcoeruleus nucleus dorsal partipsiSubCD2
Subcoeruleus nucleus ventral partipsiSubCV1
Undefined pontine nucleusipsiPundef_L3
Nucleus of the solitary tract caudal partipsiSolca0.5
Dorsal raphe nucleus caudal partipsiDRC2
Dorsal raphe nucleus rostral partipsiDRr2
Dorsal raphe nucleus around siteipsiDRas4
Linear nucleus of the rapheipsiLIR1
Median raphe nucleusipsiMnR0
Paramedian raphe nucleusipsiPMnR3
Raphe magnus nucleusipsiRMg1
Raphe pallidus nucleusipsiRPa0.5
Dorsal paragigantocellular nucleusipsiDPGi2
Lateral paragigantocellular nucleusipsiLPGi0.5
Preoptic regionipsiPREO3
Medial preoptic nucleusipsiMPO0.5
Median preoptic nucleusipsiMnPO0.5
HypothalamusipsiHYPO4
Most anterior part of the parvalbumin-positive nucleus of the lateral hypothalamusipsiPV1ma-0.5
Ventromedial hypothalamic nucleus central partipsiVMHC1
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL1
Supraoptic nucleus [Supraoptic region]ipsiSO-0.5
Supramammillar nucleusipsiSuM1
Subbrachial nucleusipsiSubB0.5
Supraoculomotor capipsiSu3C0
Lateral habenular nucleusipsiLHb2
Lateral habenular nucleus lateral part magnocellular subnucleusipsiLHbLMc2
Lateral habenular nucleus medial partipsiLHbM2
Central tegmental fasciculusipsictf-2
Bed nucleus of the stria terminalisipsiBST0.5
Medial amygdaloid nucleusipsiMe2
Anterior cingulate cortexipsiACC3
Infralimbic cortexipsiIL2
Frontal association cortexipsiFrA2
Motoric regionsipsiM1
Medial prefrontal cortexipsimPFC3
Sensory regionsipsiSR1
Lateral orbital cortexipsiLO2
Medial orbital cortexipsiMO1.5
Ventral orbital cortexipsiVO1.5
Lateral septal nucleusipsiLS0.5
Ventromedial hypothalamic nucleus central partcontraVMHC1
Ventromedial hypothalamic nucleus ventrolateral partcontraVMHVL1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications