University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Intermediomedial cell column T6 left


Abbreviation
IMMT6
Color       
Superior regionsThoracal segment 6

SynonymsAbbr.Language
Intermediomedial cell column T6IMMT6Eng

Output to

NameSideAbbr.WeightDetails
Lateral reticular nucleusipsiLRt-0.5
Lateral hypothalamic areaipsiLH1
Medial division of the hypothalamusipsiMdH1
Submedius thalamic nucleusipsiSub1.5
Lateral hypothalamic areacontraLH1
Medial division of the hypothalamuscontraMdH1
ThalamuscontraT-0.5
Submedius thalamic nucleuscontraSub3
MyocardiumipsiOrgsCorMyo-0.5
MyocardiumcontraOrgsCorMyo-0.5
Adrenal medullaipsiOrgsAM0.5
Corpus cavernosumipsiOrgCC2

Input from

NameSideAbbr.WeightDetails
Nucleus of DarkschewitschipsiDk-0.5
A5 noradrenaline cellsipsiA52
A7 noradrenaline cellsipsiA72
Locus coeruleusipsiLC2
Gigantocellular reticular nucleus ventral partipsiGiV-0.5
Subcoeruleus nucleusipsiSubC2
C1 adrenaline cellsipsiC1-0.5
Spinal vestibular nucleusipsiSpVe-0.5
Superior vestibular nucleusipsiSuVe-0.5
Lateral vestibular nucleusipsiLVe-0.5
Raphe obscurus nucleusipsiROb-0.5
Raphe pallidus nucleusipsiRPa-0.5
Rostral ventrolateral medullaipsiRVLM-0.5
Lateral hypothalamic areaipsiLH1
Lateral hypothalamic area posterior partipsiLHAp1
Tuberal division of the lateral hypothalamic areaipsiLHTC-0.5
Perifornical nucleusipsiPeF1
Cingulate cortex area 3 vasoregulatory region layer 3ipsiCg3vrL31
Cingulate cortex area 3 vasoregulatory region layer 4ipsiCg3vrL41
Cingulate cortex area 3 vasoregulatory region layer 5ipsiCg3vrL51
Cingulate cortex area 3 vasoregulatory region layer 6ipsiCg3vrL61
Insular cortexipsiICX0
Sensory regionsipsiSR0
A5 noradrenaline cellscontraA51
A7 noradrenaline cellscontraA71
Locus coeruleuscontraLC1
Subcoeruleus nucleuscontraSubC1
Lateral hypothalamic areacontraLH0.5
Cingulate cortex area 3 vasoregulatory region layer 3contraCg3vrL31
Cingulate cortex area 3 vasoregulatory region layer 4contraCg3vrL41
Cingulate cortex area 3 vasoregulatory region layer 5contraCg3vrL51
Cingulate cortex area 3 vasoregulatory region layer 6contraCg3vrL61
Insular cortexcontraICX0
Sensory regionscontraSR0

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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