University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Substantia nigra reticular part dorsal tier right


Abbreviation
SNRD
Color       
Superior regionsSubstantia nigra reticular part

SynonymsAbbr.Language
Substantia nigra reticular part dorsal tierSNRD 
Dorsal substantia nigra reticular part  
Substantia nigra reticular part dorsal sector Eng
Dorsal substantia nigra pars reticulata  
Dorsal border of substantia nigra pars reticulararis Eng

Output to

NameSideAbbr.WeightDetails
Caudate putamencontraCPu0.5
Superior colliculusipsiSC3
Superior colliculus layersipsiSCLa-0.5
Parvicellular reticular nucleusipsiPCRt-0.5
Ventral posterolateral thalamic nucleus anterior partipsiVPLA2
Ventral posteromedial thalamic nucleus anterior partipsiVPMA2
Ventromedial thalamic nucleusipsiVM1
Ventral medial nucleus of the thalamusipsiVMT2
Caudate putamenipsiCPu2
Caudodorsal striatumipsiCPucd-0.5
Dorsal striatumipsiCPud1
Ventral striatumipsiCPuv-0.5

Input from

NameSideAbbr.WeightDetails
Superior colliculusipsiSC0.5
Lateral portion of the intermediate white layer of the superior colliculusipsiInWhL0.5
Substantia nigra compact part dorsal tieripsiSNCD2
Substantia nigra compact part dorsal tier medial divisionipsiSNCDm-0.5
Substantia nigra compact part ventral tieripsiSNCV2
Ventromedial thalamic nucleus caudal two thirdsipsiVMctt1
Medial globus pallidusipsiMGP1.5
Accumbens nucleusipsiAc1
Dorsal striatumipsiCPud1
Marginal DivisionipsiMrD-0.5
Subthalamic nucleusipsiSTh4
Parasubthalamic nucleusipsiPSTh4
Subthalamic nucleus dorsal partipsiSThd3
Subthalamic nucleus medial capipsiSThMc-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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