University of Rostock

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Rat connectome



Primary somatosensory cortex barrel field layer 3 right


Abbreviation
S1BF3
Color       
Superior regionsPrimary somatosensory cortex barrel field supragranular layers

SynonymsAbbr.Language
Primary somatosensory cortex barrel field layer 3S1BF3 

SubregionsSide
Primary somatosensory cortex barrel field bottom of layer 3right
Primary somatosensory cortex barrel field layer 3 pyramidal cellsright

Output to

NameSideAbbr.WeightDetails
StriatumcontraSTR0
Primary somatosensory cortex barrel field layer 5acontraS1BF5a-0.5
Medial laterodorsal thalamic nucleus rostromedial laterodorsal thalamic nucleus transition regionipsiLDmLDmrt1
Reticular thalamic nucleusipsiRt1
Anterior pretectal nucleusipsiAPT1
StriatumipsiSTR0
Lateral agranular prefrontal cortexipsiAGl-0.5
Whiskers motor cortexipsiWMCx1
Primary somatosensory cortex barrel field layer 5bipsiS1BF5b3
Primary somatosensory cortex barrel field layer 6ipsiS1BF62
Forelimb region of secondary somatosensory cortexipsiS2FL2
Dorsal geniculate nucleus lateral partipsiDLGl0

Input from

NameSideAbbr.WeightDetails
Dorsal thalamusipsiDOR-0.5
Ventral posterior thalamic complexipsiVPT-0.5
Ventral posterior thalamic complex medial partipsiVPTm-0.5
Mid-dorsoventral of the ventral posterolateral thalamic nucleusipsiVPLmdv1
Ventral posteromedial thalamic nucleusipsiVPM1
Ventrobasal complex lateral part dorsal partipsiVBLD1
Ventrobasal complex lateral part medial regionipsiVBLM1
Posteromedial barrel subfield vibrissae row C supragranular layersipsiPMBSFCsL0.5
Primary somatosensory cortex barrel field layer 4ipsiS1BF42
Primary somatosensory cortex barrel field layer 5aipsiS1BF5a-0.5
Primary somatosensory cortex barrel field layer 2 and layer 3 inhibitory cells of layer 6ipsiS1BFL2L3iL6-0.5
Vibrissal follicle complex C3ipsiVFCC31

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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