University of Rostock

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Rat connectome



Primary somatosensory cortex barrel field layer 4 right


Abbreviation
S1BF4
Color       
Superior regionsPrimary somatosensory cortex barrel field layers

SynonymsAbbr.Language
Primary somatosensory cortex barrel field layer 4S1BF4 

SubregionsSide
Primary somatosensory cortex barrel field layer 4 star pyramid cellright
Primary somatosensory cortex barrel field layer 4 spiny stellate cell right

Output to

NameSideAbbr.WeightDetails
StriatumcontraSTR0
Lateral parietal association cortexcontraLPtA3
Primary somatosensory cortexcontraS13
Primary somatosensory cortex forelimb region forepaw layer 5contraS1FPL53
Ventral posterior thalamic complexipsiVPT2
Ventral posterolateral thalamic nucleusipsiVPL2
Ventral posteromedial thalamic nucleusipsiVPM4
Ventromedial thalamic nucleusipsiVM2
Medial laterodorsal thalamic nucleus rostromedial laterodorsal thalamic nucleus transition regionipsiLDmLDmrt1
Reticular thalamic nucleusipsiRt1
Anterior pretectal nucleusipsiAPT1
StriatumipsiSTR0
Parietal cortex posterior areaipsiParP2
Lateral agranular prefrontal cortexipsiAGl0.5
Whiskers motor cortexipsiWMCx1
Primary somatosensory cortex barrel fieldipsiS1BF-0.5
Primary somatosensory cortex barrel field layer 3ipsiS1BF32
Primary somatosensory cortex barrel field layer 6ipsiS1BF62
Primary somatosensory cortex barrel field layer 6a thalamus projecting neuronsipsiS1BF6a+3
Primary somatosensory cortex dysgranular regionipsiS1DZ2
Primary somatosensory cortex layer 3ipsiS1L32
Secondary somatosensory cortexipsiS22
Secondary somatosensory cortex orofacial region whisker representation posterior vibrissae row DipsiS2OFWPPD1
Secondary somatosensory cortex orofacial region whisker representation posterior vibrissae row EipsiS2OFWPPE1
Dorsal geniculate nucleus lateral partipsiDLGl0
Spinal cord layers C2ipsiSCLC22

Input from

NameSideAbbr.WeightDetails
Lateral parietal association cortexcontraLPtA3
Primary somatosensory cortexcontraS13
Dorsal thalamusipsiDOR-0.5
Ventral posterior thalamic complexipsiVPT3
Ventral posterior thalamic complex medial partipsiVPTm-0.5
Ventral posterolateral thalamic nucleusipsiVPL2
Mid-dorsoventral of the ventral posterolateral thalamic nucleusipsiVPLmdv3
Ventral posteromedial thalamic nucleusipsiVPM3
Ventrobasal complex lateral part dorsal partipsiVBLD2
Ventrobasal complex lateral part medial regionipsiVBLM2
Ventrolateral part of ventrobasal complex medial partipsiVBMVL2
Posteromedial barrel subfield vibrissae row C supragranular layersipsiPMBSFCsL0
Primary somatosensory cortex barrel field layer 6a thalamus projecting neuronsipsiS1BF6a+-0.5
Primary somatosensory cortex barrel field layer 4 inhibitory cells of layer 6ipsiS1BF4icL6-0.5
Vibrissal follicle complex C3ipsiVFCC30

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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