University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Trigeminal system left


Abbreviation
5S
Color       
Superior regionsBrain nerves

SynonymsAbbr.Language
Trigeminal system5SEng
Trigeminal complex Eng
Trigeminal brainstem nuclear complexTBNCEng

SubregionsSide
Area dorsal to trigeminal nucleusleft
Mesencephalic trigeminal tractleft
Nuclei of the trigeminal complexleft
Peritrigeminal zoneleft
Sensory root of the trigeminal nerveleft
Subtrigeminal regionleft
Trigeminal dorsal hornleft
Trigeminal ganglionleft
Trigeminal rootleft
Trigeminal solitary transition zoneleft
Trigeminal transition zoneleft
Trigeminothalamic tractleft
Infratrigeminal nucleusleft
Juxtatrigeminal regionleft
Area ventral to the Mo5 and medial to the Pr5left

Output to

NameSideAbbr.WeightDetails
Superior colliculusipsiSC0.5
Cerebellar lobule 2ipsiCERL2-0.5
Cerebellar lobule 2aipsiCERL2a-0.5
Cerebellar lobule 2bipsiCERL2b-0.5
Cerebellar lobule 3ipsiCERL3-0.5
Cerebellar lobule 1ipsiCERL1-0.5
Cerebellar lobule 4ipsiCERL4-0.5
Cerebellar lobule 5ipsiCERL5-0.5
Cerebellar lobule 7ipsiCERL7-0.5
Cerebellar lobule 7aipsiCERL7a-0.5
Cerebellar lobule 7bipsiCERL7b-0.5
Cerebellar lobule 8ipsiCERL8-0.5
Cerebellar lobule 9ipsiCERL9-0.5
Cerebellar lobule 10ipsiCERL10-0.5
Cerebellar lobule 6ipsiCERL6-0.5
Cerebellar lobule 6aipsiCERL6a-0.5
Cerebellar lobule 6bipsiCERL6b-0.5
Cerebellar lobule 6cipsiCERL6c-0.5
Cerebellar lobule 6dipsiCERL6d-0.5
Lateral hypothalamic area anterior partipsiLHAa0
Lateral hypothalamic area posterior partipsiLHAp1
Tuberal region of lateral hypothalamusipsiTuLH1
Medial zoneipsiMHA0
Ventromedial thalamic nucleusipsiVM-0.5
Lateral periaqueductal graycontraLPAG-0.5
Caudal part of inferior colliculuscontraICOLC1
Superior colliculuscontraSC1.5

Input from

NameSideAbbr.WeightDetails
Red nucleus parvicellular partipsiROC0
Raphe magnus nucleusipsiRMg-0.5
Ventrobasal complexipsiVB-0.5
Forelimb motor cortexipsiFMCx1
Primary somatosensory cortex barrel fieldipsiS1BF2
Dorsal root ganglion C4ipsiDRGC4-0.5
Nodose ganglionipsiAutoNoG0
Nodose ganglioncontraAutoNoG0

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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