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Rat connectome



Cerebellar lobule 6 left


Abbreviation
CERL6
Color       
Superior regionsVermis

SynonymsAbbr.Language
Cerebellar lobule 6CERL6Eng
 DEC 
Lobule 6 of the vermis Eng
Lobule 6  
6th cerebellar lobule6Cb 
Vermal lobule 6 Eng
Declive  

SubregionsSide
Cerebellar lobule 6 lateral aspectleft
Cerebellar lobule 6 medial aspectleft
Cerebellar lobule 6 zebrin bandsleft
Cerebellar lobule 6aleft
Cerebellar lobule 6bleft
Cerebellar lobule 6cleft
Cerebellar lobule 6dleft
Cerebellar lobule 6 zonesleft
Cerebellar lobule 6 molecular layerleft

Output to

NameSideAbbr.WeightDetails
Caudal aspect of the interstitial cell groups of the X-zoneipsiCaiXZO-0.5
Rostral interstitial cell groups of the X-zoneipsiRiXZO-0.5
Rostrocaudal middle third of the interstitial cell groups of the X-zoneipsiRCmtiXZO-0.5
Dorsolateral hump caudal partipsiCERcndlc-0.5
Interposed cerebellar nucleiipsiICN-0.5
Anterior interposed nucleus medial partipsiAINM-0.5
Anterior interposed nucleus medial one-thirdipsiAINMot-0.5
Interposed cerebellar nucleus posterior part medial partipsiIntPM-0.5
Posterior interposed nucleus medial partipsiCERmpin-0.5
Medial cerebellar nucleusipsiMed0
Medial cerebellar nucleus caudalmedial partipsiMedCM3
Medial cerebellar nucleus medial partipsiMedM3
Interstitial cell groupsipsiCERIc-0.5
Vestibular nucleiipsiVnc3
Medial cerebellar nucleuscontraMed-0.5
Lateral vestibular nucleuscontraLVe-0.5

Input from

NameSideAbbr.WeightDetails
Oculomotor nucleusipsi3-0.5
Dorsal tegmental nucleusipsiDTg-0.5
Interposed cerebellar nucleiipsiICN-0.5
Medial cerebellar nucleus middle subdivisionipsiMMCM-0.5
Interstitial cell groupsipsiCERIc-0.5
Locus coeruleusipsiLC-0.5
Locus coeruleus caudal partipsiLCca2
Locus coeruleus rostral partipsiLCRo1
Reticulotegmental nucleus of the ponsipsiRtTg3
Pontine nuclei central partipsiPnCe4
Pontine nuclei rostral partipsiBPNr4
Paramedian reticular nucleusipsiPMn2
Pontine reticular nucleusipsiPRN1
Pontine reticular nucleus oral partipsiPnO2
Gigantocellular reticular nucleusipsiGi2
Lateral reticular nucleusipsiLRt2
Rostral part of the magnocellular lateral reticular nucleusipsiLRtMCR2
Dorsolateral part of the caudal part of the magnocellular lateral reticular nucleusipsiLRtMCCDL-0.5
Caudolateral magnocellular lateral reticular nucleusipsiLRtMCCL2
Caudoventral magnocellular lateral reticular nucleusipsiLRtMCCV2
Dorsocaudal part of the lateral reticular nucleus magnocellular partipsiDCLRtMC-0.5
Abducens nucleusipsi6-0.5
Trigeminal systemipsi5S-0.5
Principal sensory trigeminal nucleusipsiPr50
Spinal trigeminal nucleus caudal partipsiSp5C0
Spinal trigeminal nucleus interpolar partipsiSp5I-0.5
Spinal trigeminal nucleus oral partipsiSp5O-0.5
Dorsal part of spinal trigeminal nucleus oral partipsiSp5OD-0.5
Ventral part of spinal trigeminal nucleus oral partipsiSp5OV-0.5
Trochlear nucleusipsi4-0.5
Superior central raphe nucleusipsiCS2
Raphe magnus nucleusipsiRMg2
Raphe obscurus nucleusipsiROb2
Raphe pallidus nucleusipsiRPa2
Cuneate nucleusipsiCu-0.5
Cuneate nucleus rostral partipsiCuRo-0.5
External cuneate nucleusipsiECu-0.5
Inferior olive dorsal nucleusipsiIOD-0.5
Inferior olive dorsal nucleus dorsal leafipsiIODdL-0.5
Inferior olive dorsal nucleus dorsomedial partipsiIODDM1
Inferior olive medial nucleusipsiIOM0.5
Inferior olive medial nucleus subnulceus A and BipsiIOMsAB-0.5
Medial part of the inferior olive subnucleus B of medial nucleusipsiIOBm-0.5
Inferior olive medial nucleus caudal partipsiIOMc3
Inferior olive medial nucleus medial partipsiIOMm-0.5
Inferior olive medial nucleus rostral partipsiIOMr0
Ventral caudal half of the rostral lamella of the inferior olive medial nucleusipsiIOMRVC2
Medial part of the inferior olive subnucleus C of medial nucleusipsiIOCm-0.5
Inferior olive principal nucleusipsiIOPr0
Paragigantocellular reticular nucleusipsiPGi2
Field CA3 of hippocampusipsiCA3-0.5
Cervical segment 1ipsiCS1-0.5
Central cervical nucleus C1ipsiCeCvC11
Spinal cord layer 5 C1ipsiSCL5C11
Spinal cord layer 7 C1ipsiSCL7C11
Spinal cord layer 8 C1ipsiSCL8C11
Spinal cord layer 9 C1ipsiSCL9C11
Cervical segment 2ipsiCS21
Central cervical nucleus C2ipsiCeCvC21
Spinal cord layer 5 C2ipsiSCL5C21
Spinal cord layer 7 C2ipsiSCL7C21
Spinal cord layer 8 C2ipsiSCL8C21
Spinal cord layer 9 C2ipsiSCL9C21
Cervical segment 3ipsiCS31
Central cervical nucleus C3ipsiCeCvC31
Spinal cord layer 5 C3ipsiSCL5C31
Spinal cord layer 7 C3ipsiSCL7C31
Spinal cord layer 8 C3ipsiSCL8C31
Spinal cord layer 9 C3ipsiSCL9C31
Central cervical nucleus C4ipsiCeCvC4-0.5
Spinal cord layer 5 C4ipsiSCL5C41
Spinal cord layer 7 C4ipsiSCL7C43
Spinal cord layer 8 C4ipsiSCL8C41
Spinal cord layer 9 C4ipsiSCL9C41
Spinal cord layer 5 C5ipsiSCL5C51
Spinal cord layer 6 C5ipsiSCL6C51
Spinal cord layer 3 C5ipsiSCL3C51
Spinal cord layer 4 C5ipsiSCL4C51
Spinal cord layer 1 C5ipsiSCL1C51
Spinal cord layer 2 C5ipsiSCL2C51
Spinal cord layer 7 C5ipsiSCL7C53
Spinal cord layer 8 C5ipsiSCL8C51
Spinal cord layer 5 C6ipsiSCL5C61
Spinal cord layer 6 C6ipsiSCL6C61
Spinal cord layer 3 C6ipsiSCL3C61
Spinal cord layer 4 C6ipsiSCL4C61
Spinal cord layer 1 C6ipsiSCL1C61
Spinal cord layer 2 C6ipsiSCL2C61
Spinal cord layer 7 C6ipsiSCL7C63
Spinal cord layer 8 C6ipsiSCL8C61
Spinal cord layer 5 C7ipsiSCL5C73
Spinal cord layer 6 C7ipsiSCL6C71
Spinal cord layer 3 C7ipsiSCL3C71
Spinal cord layer 4 C7ipsiSCL4C71
Spinal cord layer 1 C7ipsiSCL1C71
Spinal cord layer 2 C7ipsiSCL2C71
Spinal cord layer 7 C7ipsiSCL7C73
Spinal cord layer 8 C7ipsiSCL8C71
Spinal cord layer 5 C8ipsiSCL5C83
Spinal cord layer 6 C8ipsiSCL6C81
Spinal cord layer 3 C8ipsiSCL3C81
Spinal cord layer 4 C8ipsiSCL4C81
Spinal cord layer 1 C8ipsiSCL1C81
Spinal cord layer 2 C8ipsiSCL2C81
Spinal cord layer 7 C8ipsiSCL7C83
Spinal cord layer 8 C8ipsiSCL8C81
Spinal cord layer 5 T1ipsiSCL5T13
Spinal cord layer 6 T1ipsiSCL6T11
Spinal cord layer 3 T1ipsiSCL3T11
Spinal cord layer 4 T1ipsiSCL4T11
Spinal cord layer 1 T1ipsiSCL1T11
Spinal cord layer 2 T1ipsiSCL2T11
Spinal cord layer 7 T1ipsiSCL7T11
Spinal cord layer 8 T1ipsiSCL8T11
Spinal cord layer 5 T2ipsiSCL5T23
Spinal cord layer 5 T3ipsiSCL5T33
Spinal cord layer 5 T4ipsiSCL5T43
Spinal cord layer 5 T5ipsiSCL5T53
Spinal cord layer 5 T6ipsiSCL5T63
Spinal cord layer 5 T7ipsiSCL5T73
Spinal cord layer 5 T8ipsiSCL5T83
Spinal cord layer 5 T9ipsiSCL5T93
Spinal cord layer 5 T10ipsiSCL5T103
Spinal cord layer 5 T11ipsiSCL5T113
Spinal cord layer 7 T11ipsiSCL7T111
Central cervical nucleus T12ipsiCeCvT12-0.5
Spinal cord layer 5 T12ipsiSCL5T123
Spinal cord layer 6 T12ipsiSCL6T12-0.5
Spinal cord layer 4 T12ipsiSCL4T12-0.5
Spinal cord layer 7 T12ipsiSCL7T121
Central cervical nucleus T13ipsiCeCvT13-0.5
Spinal cord layer 5 T13ipsiSCL5T133
Spinal cord layer 6 T13ipsiSCL6T13-0.5
Spinal cord layer 4 T13ipsiSCL4T13-0.5
Spinal cord layer 7 T13ipsiSCL7T131
Spinal cord layer 5 L1ipsiSCL5L13
Spinal cord layer 6 L1ipsiSCL6L1-0.5
Spinal cord layer 4 L1ipsiSCL4L1-0.5
Spinal cord layer 7 L1ipsiSCL7L14
Spinal cord layer 5 L2ipsiSCL5L23
Spinal cord layer 6 L2ipsiSCL6L2-0.5
Spinal cord layer 4 L2ipsiSCL4L2-0.5
Spinal cord layer 7 L2ipsiSCL7L24
Spinal cord layer 5 L3ipsiSCL5L33
Spinal cord layer 6 L3ipsiSCL6L31
Spinal cord layer 4 L3ipsiSCL4L3-0.5
Spinal cord layer 7 L3ipsiSCL7L34
Spinal cord layer 6 L4ipsiSCL6L41
Spinal cord layer 7 L4ipsiSCL7L41
Ventral horn L6ipsiVHL61
Sacral precerebellar nucleus S1ipsiSPrCBS1-0.5
Ventral horn S1ipsiVHSa11
Spinal cord layer 7 S1ipsiSCL7S1-0.5
Sacral precerebellar nucleus S2ipsiSPrCBS2-0.5
Ventral horn S2ipsiVHSa21
Spinal cord layer 7 S2ipsiSCL7S2-0.5
Sacral precerebellar nucleus S3ipsiSPrCBS3-0.5
Ventral horn S3ipsiVHSa31
Spinal cord layer 7 S3ipsiSCL7S3-0.5
Sacral precerebellar nucleus S4ipsiSPrCBS4-0.5
Spinal cord layer 7 S4ipsiSCL7S4-0.5
Spinal cord layer 7 Co1ipsiSCL7Co1-0.5
Spinal cord layer 7 Co2ipsiSCL7Co2-0.5
Spinal cord layer 7 Co3ipsiSCL7Co3-0.5
Oculomotor nucleuscontra3-0.5
Medial ventral paraflocculuscontraPFlvM-0.5
Locus coeruleus caudal partcontraLCca1
Locus coeruleus rostral partcontraLCRo0.5
Reticulotegmental nucleus of the ponscontraRtTg3
Rostral part of the magnocellular lateral reticular nucleuscontraLRtMCR2
Caudolateral magnocellular lateral reticular nucleuscontraLRtMCCL2
Caudoventral magnocellular lateral reticular nucleuscontraLRtMCCV2
Abducens nucleuscontra6-0.5
Trochlear nucleuscontra4-0.5
Cuneate nucleus rostral partcontraCuRo-0.5
External cuneate nucleuscontraECu-0.5
Lateral part of the caudal end of the dorsal olivecontraDoONCeL-0.5
Inferior olivecontraIO3
Inferior olive cap of Kooy of the medial nucleuscontraIOK3
Inferior olive caudal partcontraIOCa3
Inferior olive dorsal nucleuscontraIOD3
Inferior olive dorsal nucleus medial partcontraIODm-0.5
Inferior olive medial nucleuscontraIOM3
Inferior olive subnucleus A of medial nucleuscontraIOA-0.5
Inferior olive medial nucleus caudal partcontraIOMc3
Medial part of the caudal inferior olive medial nucleuscontraIOMMc-0.5
Intermediate parts of the caudal inferior olive medial nucleuscontraIOiMc-0.5
Inferior olive medial nucleus dorsal partcontraIOdo3
Inferior olive beta subnucleuscontraIOBe3
Inferior olive subnucleus C of medial nucleuscontraIOC3
Ventromedial part of the caudal inferior olive subnucleus CcontraIOCVmCa3
Rostral part of the caudal inferior olive subnucleus CcontraIOCRCa1
Inferior olive posterior partcontraIOpo3
Inferior olive principal nucleuscontraIOPr3
Inferior olive principal nucleus caudal partcontraIOPrC1
Inferior olive dorsomedial cell columncontraIOdmc3
Central region of the caudal part of the medial olivecontraMONCC1
Medial part of the caudal part of the medial olivecontraMONCM1
Mid rostrocaudal portion of the medial olivecontraMONMRC-0.5
Medial part of the rostral medial olivary nucleuscontraONRMM-0.5
Field CA1 of hippocampuscontraCA1-0.5
Central cervical nucleus C1contraCeCvC13
Spinal cord layer 5 C1contraSCL5C10.5
Spinal cord layer 6 C1contraSCL6C1-0.5
Spinal cord layer 7 C1contraSCL7C11.5
Spinal cord layer 8 C1contraSCL8C11.5
Spinal cord layer 9 C1contraSCL9C11.5
Central cervical nucleus C2contraCeCvC23
Spinal cord layer 5 C2contraSCL5C21.5
Spinal cord layer 6 C2contraSCL6C2-0.5
Spinal cord layer 7 C2contraSCL7C21.5
Spinal cord layer 8 C2contraSCL8C21.5
Spinal cord layer 9 C2contraSCL9C21.5
Central cervical nucleus C3contraCeCvC33
Spinal cord layer 5 C3contraSCL5C31.5
Spinal cord layer 6 C3contraSCL6C3-0.5
Spinal cord layer 7 C3contraSCL7C31.5
Spinal cord layer 8 C3contraSCL8C31.5
Spinal cord layer 9 C3contraSCL9C31.5
Central cervical nucleus C4contraCeCvC4-0.5
Spinal cord layer 5 C4contraSCL5C41.5
Spinal cord layer 6 C4contraSCL6C4-0.5
Spinal cord layer 7 C4contraSCL7C41.5
Spinal cord layer 8 C4contraSCL8C41.5
Spinal cord layer 9 C4contraSCL9C41.5
Spinal cord layer 5 C5contraSCL5C51.5
Spinal cord layer 6 C5contraSCL6C51.5
Spinal cord layer 3 C5contraSCL3C51.5
Spinal cord layer 4 C5contraSCL4C51.5
Spinal cord layer 1 C5contraSCL1C51.5
Spinal cord layer 2 C5contraSCL2C51.5
Spinal cord layer 7 C5contraSCL7C51.5
Spinal cord layer 8 C5contraSCL8C51.5
Spinal cord layer 5 C6contraSCL5C61.5
Spinal cord layer 6 C6contraSCL6C61.5
Spinal cord layer 3 C6contraSCL3C61.5
Spinal cord layer 4 C6contraSCL4C61.5
Spinal cord layer 1 C6contraSCL1C61.5
Spinal cord layer 2 C6contraSCL2C61.5
Spinal cord layer 7 C6contraSCL7C61.5
Spinal cord layer 8 C6contraSCL8C61.5
Spinal cord layer 5 C7contraSCL5C71.5
Spinal cord layer 6 C7contraSCL6C71.5
Spinal cord layer 3 C7contraSCL3C71.5
Spinal cord layer 4 C7contraSCL4C71.5
Spinal cord layer 1 C7contraSCL1C71.5
Spinal cord layer 2 C7contraSCL2C71.5
Spinal cord layer 7 C7contraSCL7C71.5
Spinal cord layer 8 C7contraSCL8C71.5
Spinal cord layer 5 C8contraSCL5C81.5
Spinal cord layer 6 C8contraSCL6C81.5
Spinal cord layer 3 C8contraSCL3C81.5
Spinal cord layer 4 C8contraSCL4C81.5
Spinal cord layer 1 C8contraSCL1C81.5
Spinal cord layer 2 C8contraSCL2C81.5
Spinal cord layer 7 C8contraSCL7C81.5
Spinal cord layer 8 C8contraSCL8C81.5
Spinal cord layer 5 T1contraSCL5T11.5
Spinal cord layer 6 T1contraSCL6T11.5
Spinal cord layer 3 T1contraSCL3T11.5
Spinal cord layer 4 T1contraSCL4T11.5
Spinal cord layer 1 T1contraSCL1T11.5
Spinal cord layer 2 T1contraSCL2T11.5
Spinal cord layer 7 T1contraSCL7T11.5
Spinal cord layer 8 T1contraSCL8T11.5
Spinal cord layer 5 T2contraSCL5T20
Spinal cord layer 5 T3contraSCL5T30
Spinal cord layer 5 T4contraSCL5T40
Spinal cord layer 5 T5contraSCL5T50
Spinal cord layer 5 T6contraSCL5T60
Spinal cord layer 5 T7contraSCL5T70
Spinal cord layer 5 T8contraSCL5T80
Spinal cord layer 5 T9contraSCL5T90
Spinal cord layer 5 T10contraSCL5T100
Spinal cord layer 5 T11contraSCL5T110
Spinal cord layer 5 T12contraSCL5T120
Spinal cord layer 5 T13contraSCL5T130
Spinal cord layer 5 L1contraSCL5L10
Spinal cord layer 5 L2contraSCL5L20
Spinal cord layer 5 L3contraSCL5L30
Spinal cord layer 6 L3contraSCL6L30
Spinal cord layer 6 L4contraSCL6L40

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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