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Rat connectome



Cerebellar lobule 9 left


Abbreviation
CERL9
Color       
Superior regionsCaudal part of cerebellum

SynonymsAbbr.Language
Cerebellar lobule 9CERL9Eng
 9Cb 
Lobule 9  
UvulaUVU 

SubregionsSide
Cerebellar lobule 9 zebrin bandsleft
Cerebellar lobule 9ableft
Cerebellar lobule 9cleft
Close to the midline of the uvulaleft
Granular cell layer of cerebellar lobule 9left
Intermediate uvulaleft
Lateral uvulaleft
Medial uvulaleft
Midline part of the uvulaleft
Rostral part of the uvulaleft
Ventral part of the uvulaleft
Ventrolateral part of the basal uvulaleft
Cerebellar lobule 9 layersleft
Medial cerebellar lobule 9left
Dorsolateral aspect of the cerebellar lobule 9left

Output to

NameSideAbbr.WeightDetails
Caudal aspect of the interstitial cell groups of the X-zoneipsiCaiXZO-0.5
Rostral interstitial cell groups of the X-zoneipsiRiXZO-0.5
Rostrocaudal middle third of the interstitial cell groups of the X-zoneipsiRCmtiXZO1
Cerebellar lobule 4ipsiCERL41
Cerebellar lobule 5ipsiCERL51
Anterior interposed nucleus medial partipsiAINM-0.5
Posterior interposed nucleusipsiCERpin-0.5
Interposed cerebellar nucleus posterior part medial partipsiIntPM-0.5
Medial part of the large cell region of the posterior interposed nucleusipsiCERpinLCM-0.5
Ventral part of the caudomedial subdivision of the medial cerebellar nucleusipsiMedCMV-0.5
Medial cerebellar nucleus lateral partipsiMedL-0.5
Ventral part of the medial cerebellar nucleus middle subdivisionipsiVMMCM-0.5
Medial cerebellar nucleus ventrolateral partipsiMedVL-0.5
Medial cerebellar nucleus caudal ventral tipipsiMedcvt3
Interstitial cell groupsipsiCERIc-0.5
FlocculusipsiFl-0.5
Cerebellum parallel fibersipsicerepf-2
Cerebellum mossy fibersipsiceremossy-2
Vestibular nucleiipsiVnc-0.5
Vestibular ductsipsivd1
Climbing fibersipsicLf-2
Interposed cerebellar nuclei medial partcontraICNM1
Ventral part of the caudomedial subdivision of the medial cerebellar nucleuscontraMedCMV-0.5
Ventral part of the medial cerebellar nucleus middle subdivisioncontraVMMCM-0.5
FlocculuscontraFl-0.5
Vestibular nucleicontraVnc-0.5

Input from

NameSideAbbr.WeightDetails
Central gray alpha partipsiCGA-0.5
Interstitial nucleus of medial longitudinal fasciculusipsiIMLF-0.5
Nucleus of DarkschewitschipsiDk-0.5
Oculomotor nucleusipsi3-0.5
Dorsal periaqueductal grayipsiDPAG-0.5
Dorsolateral periaqueductal grayipsiDLPAG-0.5
Ventrolateral periaqueductal grayipsiVLPAG-0.5
Superior colliculusipsiSC1
Substantia nigra A9ipsiSN-0.5
Substantia nigra compact partipsiSNC1
Laterodorsal tegmental nucleusipsiLDTg0
Edinger Westphal nucleusipsiEW0
ParaflocculusipsiPFl1
VermisipsiVERM1
Interposed cerebellar nucleiipsiICN-0.5
Lateral cerebellar nucleus intermediate levelipsiCERLim0
Medial cerebellar nucleusipsiMed1
Caudoventral border of the medial cerebellar nucleus middle subdivisionipsiCVMMCM3
Medial cerebellar nucleus rostromedial partipsiMedrm-0.5
Medial cerebellar nucleus ventral partipsiMedV-0.5
Interstitial cell groupsipsiCERIc-0.5
FlocculusipsiFl2
Rostral part of the flocculusipsiFlR1
Lateral ponsipsiLaP0.5
Locus coeruleusipsiLC1
Ventral peduncular zoneipsiVPeZ1.5
Pons medial partipsiPme2
Pons rostral partipsiPro1
Reticulotegmental nucleus of the ponsipsiRtTg2
Pontine nucleiipsiPn3
Ventral peduncular region of the central basilar pontine nucleiipsiPnCeVe2.5
Pontine nuclei ventrocaudal partipsiPnVC2.5
Pontine nucleus oralisipsiPnOr0.5
Parvocellular pontine nucleiipsiPCPn-0.5
Prepositus nucleusipsiPr3
Paramedian reticular nucleusipsiPMn2
Pontine reticular nucleusipsiPRN3
Pontine reticular nucleus oral partipsiPnO2
Lateral parabrachial nucleusipsiLPB1
Gigantocellular reticular nucleusipsiGi2
Lateral reticular nucleusipsiLRt1
Caudal part of the lateral reticular nucleusipsiCaLRt-0.5
Rostral part of the magnocellular lateral reticular nucleusipsiLRtMCR2
Dorsolateral part of the caudal part of the magnocellular lateral reticular nucleusipsiLRtMCCDL-0.5
Caudolateral magnocellular lateral reticular nucleusipsiLRtMCCL2
Caudoventral magnocellular lateral reticular nucleusipsiLRtMCCV2
Ventromedial part of the lateral reticular nucleus magnocellular partipsiLRtMCvem-0.5
Lateral reticular nucleus ventromedial parvicellular partipsiLRtPCvm-0.5
Lateral reticular nucleus subtrigeminal partipsiLRtS5-0.5
Supragenual nucleusipsiSGe0.5
Area postremaipsiAP3
Abducens nucleusipsi63
Facial nucleusipsi70
Genu of the facial nerveipsig71
Hypoglossal nucleusipsi12S0
Trigeminal systemipsi5S-0.5
Trigeminal nucleusipsi50
Mesencephalic trigeminal nucleusipsiMe50
Mesencephalic trigeminal nucleus caudal poleipsiMe5cp0.5
Principal sensory trigeminal nucleusipsiPr53
Principal sensory trigeminal nucleus dorsal partipsiPr5D-0.5
Principal sensory trigeminal nucleus lateral half of the rostral partipsiPr5roLH-0.5
Principal sensory trigeminal nucleus ventral partipsiPr5v1
Spinal trigeminal nucleus caudal partipsiSp5C0
Spinal trigeminal nucleus caudal part rostral part layer 1ipsiSp5CrL12
Spinal trigeminal nucleus caudal part rostral part layer 2ipsiSp5CrL22
Spinal trigeminal nucleus caudal part rostral part layer 3ipsiSp5CrL32
Spinal trigeminal nucleus caudal part rostral part layer 4ipsiSp5CrL40.5
Spinal trigeminal nucleus caudal part rostral part layer 5ipsiSp5CrL50
Spinal trigeminal nucleus interpolar partipsiSp5I3
Spinal trigeminal nucleus interpolar part ventral partipsiSp5IV3
Spinal trigeminal nucleus oral partipsiSp5O-0.5
Dorsomedial portion of the spinal trigeminal nucleus oral partipsiSp5ODM3
Caudal dorsomedial portion of the spinal trigeminal nucleus oral partipsiSp5ODMc3
Rostral dorsomedial portion of the spinal trigeminal nucleus oral partipsiSp5ODMr0
Middle dorsomedial portion of the spinal trigeminal nucleus oral part ventral zoneipsiSp5ODMmiv1
Middle dorsomedial portion of the spinal trigeminal nucleus oral part dorsal zoneipsiSp5ODMdz0
Border zone of the spinal trigeminal nucleus oral partipsiSp5Obz3
Trochlear nucleusipsi4-0.5
Nucleus of origin of efferents of the vestibular nerveipsiEVe0
Spinal vestibular nucleusipsiSpVe3
Vestibular nucleiipsiVnc1
Nucleus YipsiY1
Superior vestibular nucleusipsiSuVe3
Medial vestibular nucleusipsiMVe3
Medial vestibular nucleus caudal halfipsiMVePch3
Caudal superficial medial vestibular nucleusipsiMVePcs-0.5
Medial vestibular nucleus magnocellular partipsiMVeMC3
Medial vestibular nucleus parvicellular partipsiMVePC4
Medial vestibular nucleus ventromedial partipsiMVevm1
Lateral vestibular nucleusipsiLVe1
Inferior vestibular nucleusipsiIVN-0.5
X cell group of the vestibular complexipsiXVES2
Nucleus of the solitary tractipsiSol3
Dorsal motor nucleus of vagusipsi103
Dorsal raphe nucleusipsiDR1
Superior central raphe nucleusipsiCS2
Pontine raphe nucleusipsiPnR1
Raphe magnus nucleusipsiRMg3
Raphe obscurus nucleusipsiROb3
Raphe pallidus nucleusipsiRPa3
Cuneate nucleusipsiCu1
Cuneate nucleus caudal partipsiCuC1
Cuneate nucleus rostral partipsiCuRo-0.5
GracileipsiGra1
External cuneate nucleusipsiECu-0.5
Lateral external cuneate nucleusipsiLECU2
Nucleus of RolleripsiRo3
Olivary nucleusipsiON3
Dorsomedial olivary regionipsiDMON-0.5
Inferior oliveipsiIO-0.5
Inferior olive cap of Kooy of the medial nucleusipsiIOK3
Inferior olive dorsal nucleusipsiIOD0.5
Inferior olive medial nucleusipsiIOM1
Inferior olive subnucleus A of medial nucleusipsiIOA2
Inferior olive subnucleus B of medial nucleusipsiIOB2
Medial part of the caudal inferior olive medial nucleusipsiIOMMc-0.5
Inferior olive medial nucleus medial partipsiIOMm-0.5
Medial part of the rostral inferior olive medial nucleusipsiIOMrMe1
Inferior olive beta subnucleusipsiIOBe3
Inferior olive subnucleus C of medial nucleusipsiIOC2
Medial part of the inferior olive subnucleus C of medial nucleusipsiIOCm-0.5
Inferior olive ventrolateral protrusionipsiIOVL1
Inferior olive principal nucleusipsiIOPr-0.5
Inferior olive dorsomedial cell columnipsiIOdmc3
Caudal end of the inferior olive dorsomedial cell columnipsiIOdmcC1
Ventrolateral inferior olive principal nucleusipsiIOPrVL1
Paragigantocellular reticular nucleusipsiPGi2
Dorsal paragigantocellular nucleusipsiDPGi3
Basal nucleus MeynertipsiB1
Dorsal regionipsiDHR2
Lateral hypothalamic areaipsiLH2
Zona incertaipsiZI1
Nucleus of the optic tractipsiOT2
HabenulaipsiHAB-0.5
Lateral terminal nucleus of the accessory optic tractipsiLTeN-0.5
Medial terminal nucleus of the accessory optic tractipsiMT-0.5
Amygdaloid complexipsiAC1
Dentate gyrus layersipsiDGL1
Pyramidal cell layer of the hippocampusipsiPy-0.5
Entorhinal cortexipsiEnt3
Piriform cortexipsiPir1
Cingulate cortexipsiCg1
Parietal association cortexipsiPtA1
Insular cortexipsiICX3
Interpeduncular nucleusipsiIP1
Cervical segment 1ipsiCS1-0.5
Central cervical nucleus C1ipsiCeCvC1-0.5
Spinal cord layers C1ipsiSCLC1-0.5
Spinal cord layer 5 C1ipsiSCL5C11
Spinal cord layer 7 C1ipsiSCL7C11
Spinal cord layer 8 C1ipsiSCL8C11
Spinal cord layer 9 C1ipsiSCL9C11
Cervical segment 2ipsiCS2-0.5
Central cervical nucleus C2ipsiCeCvC2-0.5
Spinal cord layers C2ipsiSCLC2-0.5
Spinal cord layer 5 C2ipsiSCL5C21
Spinal cord layer 7 C2ipsiSCL7C21
Spinal cord layer 8 C2ipsiSCL8C21
Spinal cord layer 9 C2ipsiSCL9C21
Cervical segment 3ipsiCS3-0.5
Central cervical nucleus C3ipsiCeCvC3-0.5
Spinal cord layers C3ipsiSCLC3-0.5
Spinal cord layer 5 C3ipsiSCL5C31
Spinal cord layer 7 C3ipsiSCL7C31
Spinal cord layer 8 C3ipsiSCL8C31
Spinal cord layer 9 C3ipsiSCL9C31
Central cervical nucleus C4ipsiCeCvC4-0.5
Spinal cord layer 5 C4ipsiSCL5C41
Spinal cord layer 7 C4ipsiSCL7C41
Spinal cord layer 8 C4ipsiSCL8C41
Spinal cord layer 9 C4ipsiSCL9C41
Spinal cord layer 5 C5ipsiSCL5C51
Spinal cord layer 6 C5ipsiSCL6C51
Spinal cord layer 3 C5ipsiSCL3C51
Spinal cord layer 4 C5ipsiSCL4C51
Spinal cord layer 1 C5ipsiSCL1C51
Spinal cord layer 2 C5ipsiSCL2C51
Spinal cord layer 7 C5ipsiSCL7C51
Spinal cord layer 8 C5ipsiSCL8C51
Spinal cord layer 5 C6ipsiSCL5C61
Spinal cord layer 6 C6ipsiSCL6C61
Spinal cord layer 3 C6ipsiSCL3C61
Spinal cord layer 4 C6ipsiSCL4C61
Spinal cord layer 1 C6ipsiSCL1C61
Spinal cord layer 2 C6ipsiSCL2C61
Spinal cord layer 7 C6ipsiSCL7C61
Spinal cord layer 8 C6ipsiSCL8C61
Spinal cord layer 5 C7ipsiSCL5C71
Spinal cord layer 6 C7ipsiSCL6C71
Spinal cord layer 3 C7ipsiSCL3C71
Spinal cord layer 4 C7ipsiSCL4C71
Spinal cord layer 1 C7ipsiSCL1C71
Spinal cord layer 2 C7ipsiSCL2C71
Spinal cord layer 7 C7ipsiSCL7C71
Spinal cord layer 8 C7ipsiSCL8C71
Spinal cord layer 5 C8ipsiSCL5C81
Spinal cord layer 6 C8ipsiSCL6C81
Spinal cord layer 3 C8ipsiSCL3C81
Spinal cord layer 4 C8ipsiSCL4C81
Spinal cord layer 1 C8ipsiSCL1C81
Spinal cord layer 2 C8ipsiSCL2C81
Spinal cord layer 7 C8ipsiSCL7C81
Spinal cord layer 8 C8ipsiSCL8C81
Spinal cord layer 5 T1ipsiSCL5T11
Spinal cord layer 6 T1ipsiSCL6T11
Spinal cord layer 3 T1ipsiSCL3T11
Spinal cord layer 4 T1ipsiSCL4T11
Spinal cord layer 1 T1ipsiSCL1T11
Spinal cord layer 2 T1ipsiSCL2T11
Spinal cord layer 7 T1ipsiSCL7T11
Spinal cord layer 8 T1ipsiSCL8T11
Thoracal segment 5ipsiT5-0.5
Spinal cord layers T5ipsiSCLT5-0.5
Thoracal segment 6ipsiT6-0.5
Spinal cord layers T6ipsiSCLT6-0.5
Thoracal segment 7ipsiT7-0.5
Spinal cord layers T7ipsiSCLT7-0.5
Thoracal segment 8ipsiT8-0.5
Spinal cord layers T8ipsiSCLT8-0.5
Lumbar segment 3ipsiL3-0.5
Spinal cord layers L3ipsiSCLL3-0.5
Lumbar segment 4ipsiL4-0.5
Spinal cord layers L4ipsiSCLL4-0.5
Lumbar segment 5ipsiL5-0.5
Spinal cord layers L5ipsiSCLL5-0.5
Lumbar segment 6ipsiL6-0.5
Spinal cord layers L6ipsiSCLL6-0.5
Nucleus of DarkschewitschcontraDk-0.5
Oculomotor nucleuscontra3-0.5
Dorsal terminal nucleus of the accessory optic tractcontraDT-0.5
Dorsolateral periaqueductal graycontraDLPAG-0.5
Laterodorsal tegmental nucleuscontraLDTg0
Edinger Westphal nucleuscontraEW-0.5
Interstitial nucleus of CajalcontraInC-0.5
ParaflocculuscontraPFl1
VermiscontraVERM1
Medial cerebellar nucleuscontraMed2
Medial cerebellar nucleus middle subdivisioncontraMMCM-0.5
FlocculuscontraFl1
Lateral ponscontraLaP0.5
Locus coeruleuscontraLC0.5
Ventral peduncular zonecontraVPeZ1.5
Pons medial partcontraPme2
Pons rostral partcontraPro1
Reticulotegmental nucleus of the ponscontraRtTg0.5
Prepositus nucleuscontraPr1
Deep mesencephalic nucleuscontraDpMe-0.5
Lateral parabrachial nucleuscontraLPB0.5
Lateral reticular nucleuscontraLRt-1
Caudal part of the lateral reticular nucleuscontraCaLRt-0.5
Rostral part of the magnocellular lateral reticular nucleuscontraLRtMCR2
Caudolateral magnocellular lateral reticular nucleuscontraLRtMCCL2
Caudoventral magnocellular lateral reticular nucleuscontraLRtMCCV2
Ventromedial part of the lateral reticular nucleus magnocellular partcontraLRtMCvem-0.5
Lateral reticular nucleus ventromedial parvicellular partcontraLRtPCvm-0.5
Supragenual nucleuscontraSGe0.5
Abducens nucleuscontra6-0.5
Facial nucleuscontra70
Hypoglossal nucleuscontra12S0
Trigeminal nucleuscontra50
Principal sensory trigeminal nucleuscontraPr53
Principal sensory trigeminal nucleus dorsal partcontraPr5D-0.5
Principal sensory trigeminal nucleus ventral partcontraPr5v-0.5
Spinal trigeminal nucleus interpolar partcontraSp5I3
Dorsomedial portion of the spinal trigeminal nucleus oral partcontraSp5ODM0.5
Trochlear nucleuscontra4-0.5
Nucleus of origin of efferents of the vestibular nervecontraEVe0
Spinal vestibular nucleuscontraSpVe1
Nucleus YcontraY2
Superior vestibular nucleuscontraSuVe-0.5
Medial vestibular nucleuscontraMVe1
Medial vestibular nucleus caudal halfcontraMVePch-1
Medial vestibular nucleus ventromedial partcontraMVevm2
Lateral vestibular nucleuscontraLVe2
Inferior vestibular nucleuscontraIVN-0.5
X cell group of the vestibular complexcontraXVES2
Z cell group of the vestibular complexcontraZVES3
Dorsal motor nucleus of vaguscontra100
Cuneate nucleus caudal partcontraCuC1
Cuneate nucleus rostral partcontraCuRo-0.5
GracilecontraGra0
External cuneate nucleuscontraECu-0.5
Lateral external cuneate nucleuscontraLECU1
Lateral part of the caudal half of the dorsal olivecontraDoONCL-0.5
Inferior olivecontraIO3
Inferior olive cap of Kooy of the medial nucleuscontraIOK3
Inferior olive caudal partcontraIOCa3
Inferior olive dorsal nucleuscontraIOD3
Inferior olive medial nucleuscontraIOM3
Inferior olive subnucleus A of medial nucleuscontraIOA2
Inferior olive subnucleus B of medial nucleuscontraIOB2
Lateral part of the inferior olive medial nucleus caudal partcontraIOMcLa-0.5
Medial accessory olive caudal part C groupcontraIOMcC-0.5
Inferior olive beta subnucleuscontraIOBe3
Inferior olive subnucleus C of medial nucleuscontraIOC2
Inferior olive posterior partcontraIOpo3
Inferior olive principal nucleuscontraIOPr3
Inferior olive principal nucleus ventral leafcontraIOPrvl-0.5
Lateral part of the caudal ventral lamella of the principal nucleus olivecontraIOPrvlcLL1
Inferior olive dorsomedial cell columncontraIOdmc3
Caudal group of cells in the dorsomedial part of the inferior olivecontraIOdmcCa-0.5
Caudal tip of the medial olivecontraMONCt-0.5
Nucleus of the optic tractcontraOT-0.5
Medial terminal nucleus of the accessory optic tractcontraMT-0.5
Cervical segment 1contraCS1-0.5
Central cervical nucleus C1contraCeCvC1-0.5
Spinal cord layer 5 C1contraSCL5C10.5
Spinal cord layer 7 C1contraSCL7C11.5
Spinal cord layer 8 C1contraSCL8C11.5
Spinal cord layer 9 C1contraSCL9C11.5
Cervical segment 2contraCS2-0.5
Central cervical nucleus C2contraCeCvC2-0.5
Spinal cord layer 5 C2contraSCL5C21.5
Spinal cord layer 7 C2contraSCL7C21.5
Spinal cord layer 8 C2contraSCL8C21.5
Spinal cord layer 9 C2contraSCL9C21.5
Cervical segment 3contraCS3-0.5
Central cervical nucleus C3contraCeCvC3-0.5
Spinal cord layer 5 C3contraSCL5C31.5
Spinal cord layer 7 C3contraSCL7C31.5
Spinal cord layer 8 C3contraSCL8C31.5
Spinal cord layer 9 C3contraSCL9C31.5
Central cervical nucleus C4contraCeCvC4-0.5
Spinal cord layer 5 C4contraSCL5C41.5
Spinal cord layer 7 C4contraSCL7C41.5
Spinal cord layer 8 C4contraSCL8C41.5
Spinal cord layer 9 C4contraSCL9C41.5
Spinal cord layer 5 C5contraSCL5C51.5
Spinal cord layer 6 C5contraSCL6C51.5
Spinal cord layer 3 C5contraSCL3C51.5
Spinal cord layer 4 C5contraSCL4C51.5
Spinal cord layer 1 C5contraSCL1C51.5
Spinal cord layer 2 C5contraSCL2C51.5
Spinal cord layer 7 C5contraSCL7C51.5
Spinal cord layer 8 C5contraSCL8C51.5
Spinal cord layer 5 C6contraSCL5C61.5
Spinal cord layer 6 C6contraSCL6C61.5
Spinal cord layer 3 C6contraSCL3C61.5
Spinal cord layer 4 C6contraSCL4C61.5
Spinal cord layer 1 C6contraSCL1C61.5
Spinal cord layer 2 C6contraSCL2C61.5
Spinal cord layer 7 C6contraSCL7C61.5
Spinal cord layer 8 C6contraSCL8C61.5
Spinal cord layer 5 C7contraSCL5C71.5
Spinal cord layer 6 C7contraSCL6C71.5
Spinal cord layer 3 C7contraSCL3C71.5
Spinal cord layer 4 C7contraSCL4C71.5
Spinal cord layer 1 C7contraSCL1C71.5
Spinal cord layer 2 C7contraSCL2C71.5
Spinal cord layer 7 C7contraSCL7C71.5
Spinal cord layer 8 C7contraSCL8C71.5
Spinal cord layer 5 C8contraSCL5C81.5
Spinal cord layer 6 C8contraSCL6C81.5
Spinal cord layer 3 C8contraSCL3C81.5
Spinal cord layer 4 C8contraSCL4C81.5
Spinal cord layer 1 C8contraSCL1C81.5
Spinal cord layer 2 C8contraSCL2C81.5
Spinal cord layer 7 C8contraSCL7C81.5
Spinal cord layer 8 C8contraSCL8C81.5
Spinal cord layer 5 T1contraSCL5T11.5
Spinal cord layer 6 T1contraSCL6T11.5
Spinal cord layer 3 T1contraSCL3T11.5
Spinal cord layer 4 T1contraSCL4T11.5
Spinal cord layer 1 T1contraSCL1T11.5
Spinal cord layer 2 T1contraSCL2T11.5
Spinal cord layer 7 T1contraSCL7T11.5
Spinal cord layer 8 T1contraSCL8T11.5
Thoracal segment 5contraT5-0.5
Thoracal segment 6contraT6-0.5
Thoracal segment 7contraT7-0.5
Thoracal segment 8contraT8-0.5
Lumbar segment 3contraL3-0.5
Lumbar segment 4contraL4-0.5
Lumbar segment 5contraL5-0.5
Lumbar segment 6contraL6-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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