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Rat connectome



Cerebellar lobule 6c left


Abbreviation
CERL6c
Color       
Superior regionsCerebellar lobule 6

SynonymsAbbr.Language
Cerebellar lobule 6cCERL6cEng
Cerebellar lobule VIc  
6c cerebellar lobule6cCb 

SubregionsSide
Cerebellar lobule 6c zonesleft
Cerebellar lobule 6c lateral partleft
Cerebellar lobule 6c caudal partleft
Cerebellar lobule 6c medial halfleft

Output to

NameSideAbbr.WeightDetails
Anterior interposed nucleusipsiAIN0
Interposed cerebellar nuclei medial partipsiICNM1
Posterior interposed nucleusipsiCERpin-0.5
Interposed cerebellar nucleus posterior part medial partipsiIntPM1
Large cell region of the posterior interposed nucleusipsiCERpinLC1
Medial part of the large cell region of the posterior interposed nucleusipsiCERpinLCM-0.5
Small cell region of the posterior interposed nucleusipsiCERpinSC0.5
Interstitial cell group of Buisseret DelmasipsiDNCiBD-0.5
Lateral cerebellar nucleusipsiCERL0.5
Medial cerebellar nucleusipsiMed-0.5
Medial cerebellar nucleus caudal partipsiMedc3
Medial cerebellar nucleus caudalmedial partipsiMedCM0.5
Dorsocaudal part of the medial cerebellar nucleus caudalmedial partipsiMedCMDC3
Medial cerebellar nucleus dorsolateral protuberanceipsiMedDL0.5
Caudoventral area of the medial cerebellar nucleus dorsolateral protuberanceipsiCVMedDL1
Caudal tip of the medial cerebellar nucleus dorsolateral protuberanceipsiMedDLCt-0.5
Medial cerebellar nucleus lateral partipsiMedL1
Medial cerebellar nucleus middle subdivisionipsiMMCM2
Medial cerebellar nucleus medial partipsiMedM-0.5
Juxtarestiform bodyipsijx1
Spinal vestibular nucleus rostral partipsiSpVeR1
Superior vestibular nucleusipsiSuVe1
Lateral vestibular nucleusipsiLVe0.5
Lateral vestibular nucleus dorsal partipsiLVeD1
Anterior interposed nucleuscontraAIN0
Interposed cerebellar nucleus posterior part medial partcontraIntPM1
Large cell region of the posterior interposed nucleuscontraCERpinLC0.5
Small cell region of the posterior interposed nucleuscontraCERpinSC0.5
Lateral cerebellar nucleuscontraCERL0.5
Medial cerebellar nucleuscontraMed-0.5
Medial cerebellar nucleus caudal partcontraMedc3
Medial cerebellar nucleus caudalmedial partcontraMedCM0.5
Dorsocaudal part of the medial cerebellar nucleus caudalmedial partcontraMedCMDC3
Medial cerebellar nucleus dorsolateral protuberancecontraMedDL0.5
Caudoventral area of the medial cerebellar nucleus dorsolateral protuberancecontraCVMedDL1
Caudal tip of the medial cerebellar nucleus dorsolateral protuberancecontraMedDLCt-0.5
Medial cerebellar nucleus lateral partcontraMedL1
Medial cerebellar nucleus middle subdivisioncontraMMCM0.5
Medial cerebellar nucleus medial partcontraMedM-0.5
Juxtarestiform bodycontrajx1
Spinal vestibular nucleus rostral partcontraSpVeR1
Superior vestibular nucleuscontraSuVe1
Lateral vestibular nucleuscontraLVe0.5
Lateral vestibular nucleus dorsal partcontraLVeD1

Input from

NameSideAbbr.WeightDetails
Lateral tegmental nucleusipsiLTN1
Lateral ponsipsiLaP1
Medial border of the ponsipsiPmb-0.5
Locus coeruleusipsiLC0.5
Pons medial partipsiPme2
Pons rostral partipsiPro3
Pons ventral partipsiPve1.5
Pons ventrolateral partipsiPVLP1.5
Reticulotegmental nucleus of the ponsipsiRtTg3
Dorsolateral part of the central part of the reticulotegmental nucleus of the ponsipsiRtTgCDL3
Dorsomedial perimeter of the central part of the reticulotegmental nucleus of the ponsipsiRtTgCDM3
Medial perimeter of the central part of the reticulotegmental nucleus of the ponsipsiRtTgCM3
Rostrocaudal extend of the reticulotegmental nucleus of the pons medial partipsiRCRtTgm3
Dorsolateral perimeter of the reticulotegmental nucleus of the pons pericentral partipsiRtTgPDL3
Dorsomedial perimeter of the reticulotegmental nucleus of the pons pericentral partipsiRtTgPDM3
Medial perimeter of the reticulotegmental nucleus of the pons pericentral partipsiRtTgPM3
Pontine nucleiipsiPn3
Pontine nuclei rostral partipsiBPNr1
Prepositus nucleusipsiPr1
Paramedian reticular nucleusipsiPMn1
Pontine reticular nucleus oral partipsiPnO1
Pontine reticular nucleus caudal partipsiPNC1
Gigantocellular reticular nucleusipsiGi1
Gigantocellular reticular nucleus ventral partipsiGiV1
Lateral reticular nucleusipsiLRt2
Lateral reticular nucleus parvicellular partipsiLRtPC0
Ventral border of the ponsipsiPvB-0.5
Pons ventromedialipsiVeMeP1.5
Trigeminal systemipsi5S-0.5
Principal sensory trigeminal nucleusipsiPr50
Spinal trigeminal nucleus caudal partipsiSp5C0
Spinal trigeminal nucleus interpolar partipsiSp5I-0.5
Spinal trigeminal nucleus oral partipsiSp5O-0.5
Dorsal part of spinal trigeminal nucleus oral partipsiSp5OD-0.5
Ventral part of spinal trigeminal nucleus oral partipsiSp5OV-0.5
Spinal vestibular nucleusipsiSpVe0.5
Nucleus YipsiY0
Superior vestibular nucleusipsiSuVe0.5
Medial vestibular nucleusipsiMVe0.5
Lateral vestibular nucleusipsiLVe0
X cell group of the vestibular complexipsiXVES0
Z cell group of the vestibular complexipsiZVES0
Pontine raphe nucleusipsiPnR2
Cuneate nucleusipsiCu0
External cuneate nucleusipsiECu0
Nucleus of RolleripsiRo1
Inferior olive cap of Kooy of the medial nucleusipsiIOK0
Inferior olive dorsal nucleusipsiIOD0.5
Inferior olive medial nucleusipsiIOM3
Inferior olive beta subnucleusipsiIOBe1
Inferior olive subnucleus C of medial nucleusipsiIOC-0.5
Inferior olive ventrolateral protrusionipsiIOVL0
Transition of subnulceus C and betaipsiIOMVtcb-0.5
Inferior olive principal nucleusipsiIOPr1
Inferior olive dorsomedial cell groupipsiIODM0
Intercalated massesipsiIM1
Central cervical nucleus C1ipsiCeCvC1-0.5
Spinal cord layer 5 C1ipsiSCL5C11
Spinal cord layer 7 C1ipsiSCL7C11
Spinal cord layer 8 C1ipsiSCL8C11
Spinal cord layer 9 C1ipsiSCL9C11
Central cervical nucleus C2ipsiCeCvC2-0.5
Spinal cord layer 5 C2ipsiSCL5C21
Spinal cord layer 7 C2ipsiSCL7C21
Spinal cord layer 8 C2ipsiSCL8C21
Spinal cord layer 9 C2ipsiSCL9C21
Central cervical nucleus C3ipsiCeCvC3-0.5
Spinal cord layer 5 C3ipsiSCL5C31
Spinal cord layer 7 C3ipsiSCL7C31
Spinal cord layer 8 C3ipsiSCL8C31
Spinal cord layer 9 C3ipsiSCL9C31
Central cervical nucleus C4ipsiCeCvC4-0.5
Spinal cord layer 5 C4ipsiSCL5C41
Spinal cord layer 7 C4ipsiSCL7C41
Spinal cord layer 8 C4ipsiSCL8C41
Spinal cord layer 9 C4ipsiSCL9C41
Spinal cord layer 5 C5ipsiSCL5C51
Spinal cord layer 6 C5ipsiSCL6C51
Spinal cord layer 3 C5ipsiSCL3C51
Spinal cord layer 4 C5ipsiSCL4C51
Spinal cord layer 1 C5ipsiSCL1C51
Spinal cord layer 2 C5ipsiSCL2C51
Spinal cord layer 7 C5ipsiSCL7C51
Spinal cord layer 8 C5ipsiSCL8C51
Spinal cord layer 5 C6ipsiSCL5C61
Spinal cord layer 6 C6ipsiSCL6C61
Spinal cord layer 3 C6ipsiSCL3C61
Spinal cord layer 4 C6ipsiSCL4C61
Spinal cord layer 1 C6ipsiSCL1C61
Spinal cord layer 2 C6ipsiSCL2C61
Spinal cord layer 7 C6ipsiSCL7C61
Spinal cord layer 8 C6ipsiSCL8C61
Spinal cord layer 5 C7ipsiSCL5C71
Spinal cord layer 6 C7ipsiSCL6C71
Spinal cord layer 3 C7ipsiSCL3C71
Spinal cord layer 4 C7ipsiSCL4C71
Spinal cord layer 1 C7ipsiSCL1C71
Spinal cord layer 2 C7ipsiSCL2C71
Spinal cord layer 7 C7ipsiSCL7C71
Spinal cord layer 8 C7ipsiSCL8C71
Spinal cord layer 5 C8ipsiSCL5C81
Spinal cord layer 6 C8ipsiSCL6C81
Spinal cord layer 3 C8ipsiSCL3C81
Spinal cord layer 4 C8ipsiSCL4C81
Spinal cord layer 1 C8ipsiSCL1C81
Spinal cord layer 2 C8ipsiSCL2C81
Spinal cord layer 7 C8ipsiSCL7C81
Spinal cord layer 8 C8ipsiSCL8C81
Spinal cord layer 5 T1ipsiSCL5T11
Spinal cord layer 6 T1ipsiSCL6T11
Spinal cord layer 3 T1ipsiSCL3T11
Spinal cord layer 4 T1ipsiSCL4T11
Spinal cord layer 1 T1ipsiSCL1T11
Spinal cord layer 2 T1ipsiSCL2T11
Spinal cord layer 7 T1ipsiSCL7T11
Spinal cord layer 8 T1ipsiSCL8T11
Lateral tegmental nucleuscontraLTN2
Lateral ponscontraLaP1
Locus coeruleuscontraLC0.5
Medial border of the ponscontraPmb-0.5
Pons medial partcontraPme2
Pons rostral partcontraPro3
Pons ventral partcontraPve1.5
Pons ventrolateral partcontraPVLP1.5
Reticulotegmental nucleus of the ponscontraRtTg3
Dorsolateral part of the central part of the reticulotegmental nucleus of the ponscontraRtTgCDL3
Dorsomedial perimeter of the central part of the reticulotegmental nucleus of the ponscontraRtTgCDM3
Medial perimeter of the central part of the reticulotegmental nucleus of the ponscontraRtTgCM3
Rostrocaudal extend of the reticulotegmental nucleus of the pons medial partcontraRCRtTgm3
Dorsolateral perimeter of the reticulotegmental nucleus of the pons pericentral partcontraRtTgPDL3
Dorsomedial perimeter of the reticulotegmental nucleus of the pons pericentral partcontraRtTgPDM3
Medial perimeter of the reticulotegmental nucleus of the pons pericentral partcontraRtTgPM3
Pontine nucleicontraPn3
Pontine nuclei rostral partcontraBPNr1
Prepositus nucleuscontraPr1
Paramedian reticular nucleuscontraPMn1
Pontine reticular nucleus oral partcontraPnO1
Pontine reticular nucleus caudal partcontraPNC1
Gigantocellular reticular nucleuscontraGi1
Gigantocellular reticular nucleus ventral partcontraGiV1
Lateral reticular nucleuscontraLRt0.5
Lateral reticular nucleus parvicellular partcontraLRtPC0
Ventral border of the ponscontraPvB-0.5
Pons ventromedialcontraVeMeP1.5
Spinal vestibular nucleuscontraSpVe0.5
Nucleus YcontraY0
Superior vestibular nucleuscontraSuVe1
Medial vestibular nucleuscontraMVe0
Lateral vestibular nucleuscontraLVe0
X cell group of the vestibular complexcontraXVES0
Z cell group of the vestibular complexcontraZVES0
Pontine raphe nucleuscontraPnR2
Cuneate nucleuscontraCu0.5
External cuneate nucleuscontraECu0
Nucleus of RollercontraRo1
Inferior olivecontraIO3
Inferior olive cap of Kooy of the medial nucleuscontraIOK0
Inferior olive dorsal nucleuscontraIOD0
Inferior olive medial nucleuscontraIOM4
Inferior olive medial nucleus caudal partcontraIOMc3
Inferior olive medial nucleus dorsal partcontraIOdo3
Inferior olive beta subnucleuscontraIOBe3
Inferior olive ventrolateral protrusioncontraIOVL0
Inferior olive principal nucleuscontraIOPr1
Inferior olive principal nucleus caudal partcontraIOPrC1
Inferior olive dorsomedial cell groupcontraIODM0
Intercalated massescontraIM1
Central cervical nucleus C1contraCeCvC1-0.5
Spinal cord layer 5 C1contraSCL5C10.5
Spinal cord layer 7 C1contraSCL7C11.5
Spinal cord layer 8 C1contraSCL8C11.5
Spinal cord layer 9 C1contraSCL9C11.5
Central cervical nucleus C2contraCeCvC2-0.5
Spinal cord layer 5 C2contraSCL5C21.5
Spinal cord layer 7 C2contraSCL7C21.5
Spinal cord layer 8 C2contraSCL8C21.5
Spinal cord layer 9 C2contraSCL9C21.5
Central cervical nucleus C3contraCeCvC3-0.5
Spinal cord layer 5 C3contraSCL5C31.5
Spinal cord layer 7 C3contraSCL7C31.5
Spinal cord layer 8 C3contraSCL8C31.5
Spinal cord layer 9 C3contraSCL9C31.5
Central cervical nucleus C4contraCeCvC4-0.5
Spinal cord layer 5 C4contraSCL5C41.5
Spinal cord layer 7 C4contraSCL7C41.5
Spinal cord layer 8 C4contraSCL8C41.5
Spinal cord layer 9 C4contraSCL9C41.5
Spinal cord layer 5 C5contraSCL5C51.5
Spinal cord layer 6 C5contraSCL6C51.5
Spinal cord layer 3 C5contraSCL3C51.5
Spinal cord layer 4 C5contraSCL4C51.5
Spinal cord layer 1 C5contraSCL1C51.5
Spinal cord layer 2 C5contraSCL2C51.5
Spinal cord layer 7 C5contraSCL7C51.5
Spinal cord layer 8 C5contraSCL8C51.5
Spinal cord layer 5 C6contraSCL5C61.5
Spinal cord layer 6 C6contraSCL6C61.5
Spinal cord layer 3 C6contraSCL3C61.5
Spinal cord layer 4 C6contraSCL4C61.5
Spinal cord layer 1 C6contraSCL1C61.5
Spinal cord layer 2 C6contraSCL2C61.5
Spinal cord layer 7 C6contraSCL7C61.5
Spinal cord layer 8 C6contraSCL8C61.5
Spinal cord layer 5 C7contraSCL5C71.5
Spinal cord layer 6 C7contraSCL6C71.5
Spinal cord layer 3 C7contraSCL3C71.5
Spinal cord layer 4 C7contraSCL4C71.5
Spinal cord layer 1 C7contraSCL1C71.5
Spinal cord layer 2 C7contraSCL2C71.5
Spinal cord layer 7 C7contraSCL7C71.5
Spinal cord layer 8 C7contraSCL8C71.5
Spinal cord layer 5 C8contraSCL5C81.5
Spinal cord layer 6 C8contraSCL6C81.5
Spinal cord layer 3 C8contraSCL3C81.5
Spinal cord layer 4 C8contraSCL4C81.5
Spinal cord layer 1 C8contraSCL1C81.5
Spinal cord layer 2 C8contraSCL2C81.5
Spinal cord layer 7 C8contraSCL7C81.5
Spinal cord layer 8 C8contraSCL8C81.5
Spinal cord layer 5 T1contraSCL5T11.5
Spinal cord layer 6 T1contraSCL6T11.5
Spinal cord layer 3 T1contraSCL3T11.5
Spinal cord layer 4 T1contraSCL4T11.5
Spinal cord layer 1 T1contraSCL1T11.5
Spinal cord layer 2 T1contraSCL2T11.5
Spinal cord layer 7 T1contraSCL7T11.5
Spinal cord layer 8 T1contraSCL8T11.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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