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Rat connectome



Cerebellar lobule 3 left


Abbreviation
CERL3
Color       
Superior regionsCentral lobule

SynonymsAbbr.Language
Cerebellar lobule 3CERL3Eng
Lobule 3  
3rd cerebellar lobule3Cb 

SubregionsSide
Cerebellar lobule 3a zonesleft
Cerebellar lobule 3b zonesleft
Cerebellar lobule 3 zonesleft
Cerebellar lobule 3 zebrin bandsleft
Cerebellar lobule 3 intermediate arealeft
Cerebellar lobule 3 granule cellsleft
Cerebellar lobule 3 molecular layerleft
Posterior cerebellar lobule 3left

Output to

NameSideAbbr.WeightDetails
Caudal aspect of the interstitial cell groups of the X-zoneipsiCaiXZO-0.5
Rostral interstitial cell groups of the X-zoneipsiRiXZO-0.5
Anterior interposed nucleus medial partipsiAINM-0.5
Interposed cerebellar nucleus posterior part medial partipsiIntPM-0.5
Medial cerebellar nucleus rostral partipsiMedR3
Medial cerebellar nucleus medial partipsiMedM-0.5
Interstitial cell groupsipsiCERIc-0.5
Cerebellum parallel fibersipsicerepf-2
Cerebellum mossy fibersipsiceremossy-2
Parabrachial nucleusipsiPB0
Dorsal part of the middle one third of the parabrachial nucleusipsiPBDmiotD3
Vestibular nucleiipsiVnc-0.5
Climbing fibersipsicLf-2
Medial cerebellar nucleus medial partcontraMedM-0.5

Input from

NameSideAbbr.WeightDetails
Reticulotegmental nucleus of the ponsipsiRtTg1
Pontine nucleiipsiPn0
Parabrachial nucleusipsiPB-0.5
Lateral parabrachial nucleus lateral partipsiLPBL-0.5
Parabrachial nucleus dorsal medial clusteripsiPBdmc-0.5
Parabrachial nucleus dorsal partipsiPBD-1
Parabrachial nucleus magnocellular partipsiPBmac-0.5
Lateral reticular nucleusipsiLRt3
Caudal part of the lateral reticular nucleusipsiCaLRt-0.5
Lateral reticular nucleus magnocellular partipsiLRtMC-0.5
Dorsolateral part of the lateral reticular nucleus magnocellular partipsiLRtMCDL-0.5
Lateral reticular nucleus ventromedial magnocellular partipsiLRtMCvm-0.5
Rostral part of the magnocellular lateral reticular nucleusipsiLRtMCR3
Dorsolateral part of the caudal part of the magnocellular lateral reticular nucleusipsiLRtMCCDL-0.5
Ventromedial part of the lateral reticular nucleus magnocellular partipsiLRtMCvem-0.5
Lateral part of the ventromedial part of the lateral reticular nucleus magnocellular partipsiLRtMCLvem-0.5
Dorsocaudal part of the lateral reticular nucleus magnocellular partipsiDCLRtMC-0.5
Middle part of the lateral reticular nucleus magnocellular partipsimiLRtMC-0.5
Lateral reticular nucleus parvicellular partipsiLRtPC-0.5
Lateral reticular nucleus subtrigeminal partipsiLRtS50
Trigeminal systemipsi5S-0.5
Cuneate nucleusipsiCu2
Cuneate nucleus rostral partipsiCuRo-0.5
Cuneate nucleus ventrolateral partipsiCuVL1
External cuneate nucleusipsiECu-0.5
Lateral external cuneate nucleusipsiLECU2
Lateral external cuneate nucleus ventromedial partipsiLECUvm2.5
Inferior oliveipsiIO3
Inferior olive cap of Kooy of the medial nucleusipsiIOK-0.5
Caudal part of the dorsal cap of KooyipsiCDC-0.5
Inferior olive dorsal nucleusipsiIOD-0.5
Inferior olive dorsal nucleus caudal partipsiIODC-0.5
Horizontal lamella of the inferior olive medial nucleusipsiIOMH-0.5
Inferior olive medial nucleus subnulceus A and BipsiIOMsAB-0.5
Inferior olive medial nucleus caudal partipsiIOMc1
Caudal part of the inferior olive ventrolateral protrusionipsiIOVLC-0.5
Inferior olive principal nucleusipsiIOPr-0.5
Tuberomammillary nucleusipsiTuM1
Dorsal spinocerebellar tractipsidsc-2
Ventral spinocerebellar tractipsivsc-2
Cervical segment 1ipsiCS13
Central cervical nucleus C1ipsiCeCvC11
Cervical segment 2ipsiCS23
Central cervical nucleus C2ipsiCeCvC21
Cervical segment 3ipsiCS33
Central cervical nucleus C3ipsiCeCvC31
Central cervical nucleus C4ipsiCeCvC4-0.5
Spinal cord layer 7 C4ipsiSCL7C43
Spinal cord layer 7 C5ipsiSCL7C53
Spinal cord layer 7 C6ipsiSCL7C63
Spinal cord layer 5 C7ipsiSCL5C73
Spinal cord layer 7 C7ipsiSCL7C73
Spinal cord layer 5 C8ipsiSCL5C83
Spinal cord layer 7 C8ipsiSCL7C83
Dorsal nucleus T1ipsiDNT13
Spinal cord layer 5 T1ipsiSCL5T13
Spinal cord layer 6 T1ipsiSCL6T13
Spinal cord layer 4 T1ipsiSCL4T13
Dorsal nucleus T2ipsiDNT23
Spinal cord layer 5 T2ipsiSCL5T23
Spinal cord layer 6 T2ipsiSCL6T23
Spinal cord layer 4 T2ipsiSCL4T23
Dorsal nucleus T3ipsiDNT33
Spinal cord layer 5 T3ipsiSCL5T33
Spinal cord layer 6 T3ipsiSCL6T33
Spinal cord layer 4 T3ipsiSCL4T33
Dorsal nucleus T4ipsiDNT43
Spinal cord layer 5 T4ipsiSCL5T43
Spinal cord layer 6 T4ipsiSCL6T43
Spinal cord layer 4 T4ipsiSCL4T43
Thoracal segment 5ipsiT5-0.5
Dorsal nucleus T5ipsiDNT53
Spinal cord layer 5 T5ipsiSCL5T53
Spinal cord layer 6 T5ipsiSCL6T53
Spinal cord layer 4 T5ipsiSCL4T53
Thoracal segment 6ipsiT6-0.5
Dorsal nucleus T6ipsiDNT63
Spinal cord layer 5 T6ipsiSCL5T63
Spinal cord layer 6 T6ipsiSCL6T63
Spinal cord layer 4 T6ipsiSCL4T63
Thoracal segment 7ipsiT7-0.5
Dorsal nucleus T7ipsiDNT73
Spinal cord layer 5 T7ipsiSCL5T73
Spinal cord layer 6 T7ipsiSCL6T73
Spinal cord layer 4 T7ipsiSCL4T73
Thoracal segment 8ipsiT8-0.5
Dorsal nucleus T8ipsiDNT83
Spinal cord layer 5 T8ipsiSCL5T83
Spinal cord layer 6 T8ipsiSCL6T83
Spinal cord layer 4 T8ipsiSCL4T83
Dorsal nucleus T9ipsiDNT93
Spinal cord layer 5 T9ipsiSCL5T93
Spinal cord layer 6 T9ipsiSCL6T93
Spinal cord layer 4 T9ipsiSCL4T93
Dorsal nucleus T10ipsiDNT103
Spinal cord layer 5 T10ipsiSCL5T103
Spinal cord layer 6 T10ipsiSCL6T103
Spinal cord layer 4 T10ipsiSCL4T103
Dorsal nucleus T11ipsiDNT113
Spinal cord layer 5 T11ipsiSCL5T113
Spinal cord layer 6 T11ipsiSCL6T113
Spinal cord layer 4 T11ipsiSCL4T113
Spinal cord layer 7 T11ipsiSCL7T111
Thoracal segment 12ipsiT12-0.5
Dorsal nucleus T12ipsiDNT123
Spinal cord layer 5 T12ipsiSCL5T123
Spinal cord layer 6 T12ipsiSCL6T123
Spinal cord layer 4 T12ipsiSCL4T123
Spinal cord layer 7 T12ipsiSCL7T121
Thoracal segment 13ipsiT133
Dorsal nucleus T13ipsiDNT133
Spinal cord layer 5 T13ipsiSCL5T133
Spinal cord layer 6 T13ipsiSCL6T133
Spinal cord layer 4 T13ipsiSCL4T133
Spinal cord layer 7 T13ipsiSCL7T131
Lumbar segment 1ipsiL13
Spinal cord layer 5 L1ipsiSCL5L13
Spinal cord layer 6 L1ipsiSCL6L13
Spinal cord layer 4 L1ipsiSCL4L13
Spinal cord layer 7 L1ipsiSCL7L14
Lumbar segment 2ipsiL23
Spinal cord layer 5 L2ipsiSCL5L23
Spinal cord layer 6 L2ipsiSCL6L23
Spinal cord layer 4 L2ipsiSCL4L23
Spinal cord layer 7 L2ipsiSCL7L24
Lumbar segment 3ipsiL33
Spinal cord layer 5 L3ipsiSCL5L33
Spinal cord layer 6 L3ipsiSCL6L33
Spinal cord layer 4 L3ipsiSCL4L33
Spinal cord layer 7 L3ipsiSCL7L34
Lumbar segment 4ipsiL42.5
Spinal cord layer 6 L4ipsiSCL6L41
Spinal cord layer 7 L4ipsiSCL7L41
Lumbar segment 5ipsiL53
Lumbar segment 6ipsiL6-0.5
Ventral horn L6ipsiVHL61
Sacral segment 1ipsiSa1-0.5
Ventral horn S1ipsiVHSa11
Spinal cord layer 7 S1ipsiSCL7S1-0.5
Sacral segment 2ipsiSa2-0.5
Ventral horn S2ipsiVHSa21
Spinal cord layer 7 S2ipsiSCL7S2-0.5
Sacral segment 3ipsiSa3-0.5
Ventral horn S3ipsiVHSa31
Spinal cord layer 7 S3ipsiSCL7S3-0.5
Sacral segment 4ipsiSa4-0.5
Spinal cord layer 7 S4ipsiSCL7S4-0.5
Coccygeal segment 1ipsiCo1-0.5
Spinal cord layer 7 Co1ipsiSCL7Co1-0.5
Coccygeal segment 2ipsiCo2-0.5
Spinal cord layer 7 Co2ipsiSCL7Co2-0.5
Coccygeal segment 3ipsiCo3-0.5
Spinal cord layer 7 Co3ipsiSCL7Co3-0.5
Reticulotegmental nucleus of the ponscontraRtTg1
Lateral reticular nucleuscontraLRt-0.5
Caudal part of the lateral reticular nucleuscontraCaLRt-0.5
Lateral reticular nucleus magnocellular partcontraLRtMC-0.5
Dorsolateral part of the lateral reticular nucleus magnocellular partcontraLRtMCDL-0.5
Lateral reticular nucleus ventromedial magnocellular partcontraLRtMCvm-0.5
Rostral part of the magnocellular lateral reticular nucleuscontraLRtMCR3
Ventromedial part of the lateral reticular nucleus magnocellular partcontraLRtMCvem-0.5
Middle part of the lateral reticular nucleus magnocellular partcontramiLRtMC-0.5
Lateral reticular nucleus parvicellular partcontraLRtPC-0.5
Lateral reticular nucleus ventromedial parvicellular partcontraLRtPCvm-0.5
Lateral reticular nucleus subtrigeminal partcontraLRtS50
Cuneate nucleuscontraCu0
External cuneate nucleuscontraECu-0.5
Lateral external cuneate nucleuscontraLECU0
Central part of the caudal half of the dorsal olivecontraDoONCCC3
Lateral part of the caudal half of the dorsal olivecontraDoONCL3
Inferior olivecontraIO3
Inferior olive cap of Kooy of the medial nucleuscontraIOK3
Caudal part of the dorsal cap of KooycontraCDC-0.5
Inferior olive caudal partcontraIOCa3
Inferior olive dorsal nucleuscontraIOD3
Inferior olive dorsal nucleus caudal partcontraIODC-0.5
Caudolateral portion of the rostral half of the inferior olive dorsal nucleuscontraIODRCL-0.5
Inferior olive medial nucleuscontraIOM3
Inferior olive medial nucleus caudal partcontraIOMc3
Lateral part of the inferior olive medial nucleus caudal partcontraIOMcLa3
Inferior olive medial nucleus caudolateral partcontraIOMcL-0.5
Inferior olive beta subnucleuscontraIOBe3
Inferior olive posterior partcontraIOpo3
Inferior olive principal nucleuscontraIOPr3
Inferior olive principal nucleus rostral partcontraIOPrR-0.5
Inferior olive dorsomedial cell columncontraIOdmc3
Inferior olive dorsomedial cell groupcontraIODM-0.5
Central region of the caudal part of the medial olivecontraMONCC3
Tuberomammillary nucleuscontraTuM0.5
Cervical segment 1contraCS1-0.5
Central cervical nucleus C1contraCeCvC13
Spinal cord layer 6 C1contraSCL6C1-0.5
Spinal cord layer 7 C1contraSCL7C1-0.5
Cervical segment 2contraCS2-0.5
Central cervical nucleus C2contraCeCvC23
Spinal cord layer 6 C2contraSCL6C2-0.5
Spinal cord layer 7 C2contraSCL7C2-0.5
Cervical segment 3contraCS3-0.5
Central cervical nucleus C3contraCeCvC33
Spinal cord layer 6 C3contraSCL6C3-0.5
Spinal cord layer 7 C3contraSCL7C3-0.5
Spinal cord layer 6 C4contraSCL6C4-0.5
Spinal cord layer 7 C4contraSCL7C41
Spinal cord layer 6 C5contraSCL6C5-0.5
Spinal cord layer 7 C5contraSCL7C51
Spinal cord layer 6 C6contraSCL6C6-0.5
Spinal cord layer 7 C6contraSCL7C61
Spinal cord layer 5 C7contraSCL5C70
Spinal cord layer 6 C7contraSCL6C7-0.5
Spinal cord layer 7 C7contraSCL7C71
Spinal cord layer 5 C8contraSCL5C80
Spinal cord layer 6 C8contraSCL6C8-0.5
Spinal cord layer 7 C8contraSCL7C81
Dorsal nucleus T1contraDNT11
Spinal cord layer 5 T1contraSCL5T11
Spinal cord layer 6 T1contraSCL6T11
Spinal cord layer 4 T1contraSCL4T11
Dorsal nucleus T2contraDNT21
Spinal cord layer 5 T2contraSCL5T21
Spinal cord layer 6 T2contraSCL6T21
Spinal cord layer 4 T2contraSCL4T21
Dorsal nucleus T3contraDNT31
Spinal cord layer 5 T3contraSCL5T31
Spinal cord layer 6 T3contraSCL6T31
Spinal cord layer 4 T3contraSCL4T31
Dorsal nucleus T4contraDNT41
Spinal cord layer 5 T4contraSCL5T41
Spinal cord layer 6 T4contraSCL6T41
Spinal cord layer 4 T4contraSCL4T41
Thoracal segment 5contraT5-0.5
Dorsal nucleus T5contraDNT51
Spinal cord layer 5 T5contraSCL5T51
Spinal cord layer 6 T5contraSCL6T51
Spinal cord layer 4 T5contraSCL4T51
Thoracal segment 6contraT6-0.5
Dorsal nucleus T6contraDNT61
Spinal cord layer 5 T6contraSCL5T61
Spinal cord layer 6 T6contraSCL6T61
Spinal cord layer 4 T6contraSCL4T61
Thoracal segment 7contraT7-0.5
Dorsal nucleus T7contraDNT71
Spinal cord layer 5 T7contraSCL5T71
Spinal cord layer 6 T7contraSCL6T71
Spinal cord layer 4 T7contraSCL4T71
Thoracal segment 8contraT8-0.5
Dorsal nucleus T8contraDNT81
Spinal cord layer 5 T8contraSCL5T81
Spinal cord layer 6 T8contraSCL6T81
Spinal cord layer 4 T8contraSCL4T81
Dorsal nucleus T9contraDNT91
Spinal cord layer 5 T9contraSCL5T91
Spinal cord layer 6 T9contraSCL6T91
Spinal cord layer 4 T9contraSCL4T91
Dorsal nucleus T10contraDNT101
Spinal cord layer 5 T10contraSCL5T101
Spinal cord layer 6 T10contraSCL6T101
Spinal cord layer 4 T10contraSCL4T101
Dorsal nucleus T11contraDNT111
Spinal cord layer 5 T11contraSCL5T111
Spinal cord layer 6 T11contraSCL6T111
Spinal cord layer 4 T11contraSCL4T111
Dorsal nucleus T12contraDNT121
Spinal cord layer 5 T12contraSCL5T121
Spinal cord layer 6 T12contraSCL6T121
Spinal cord layer 4 T12contraSCL4T121
Dorsal nucleus T13contraDNT131
Spinal cord layer 5 T13contraSCL5T131
Spinal cord layer 6 T13contraSCL6T131
Spinal cord layer 4 T13contraSCL4T131
Spinal cord layer 5 L1contraSCL5L11
Spinal cord layer 6 L1contraSCL6L11
Spinal cord layer 4 L1contraSCL4L11
Spinal cord layer 7 L1contraSCL7L11
Spinal cord layer 5 L2contraSCL5L21
Spinal cord layer 6 L2contraSCL6L21
Spinal cord layer 4 L2contraSCL4L21
Spinal cord layer 7 L2contraSCL7L21
Lumbar segment 3contraL3-0.5
Spinal cord layer 5 L3contraSCL5L31
Spinal cord layer 6 L3contraSCL6L31
Spinal cord layer 4 L3contraSCL4L31
Spinal cord layer 7 L3contraSCL7L31
Lumbar segment 4contraL4-0.5
Spinal cord layer 6 L4contraSCL6L40
Lumbar segment 5contraL5-0.5
Lumbar segment 6contraL6-0.5
Sacral segment 1contraSa1-0.5
Sacral segment 2contraSa2-0.5
Sacral segment 3contraSa3-0.5
Sacral segment 4contraSa4-0.5
Coccygeal segment 1contraCo1-0.5
Coccygeal segment 2contraCo2-0.5
Coccygeal segment 3contraCo3-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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