University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Spinal trigeminal nucleus interpolar part caudal left


Abbreviation
Sp5Ic
Color       
Superior regionsSpinal trigeminal nucleus interpolar part

SynonymsAbbr.Language
Caudal part of the spinal trigeminal nucleus interpolar part Eng
Spinal trigeminal nucleus interpolar part caudal portion Eng
Caudal part of the subnucleus interpolaris Eng
Spinal trigeminal nucleus interpolar part caudalSp5IcEng

SubregionsSide
Crescent area of the caudal part of the interpolar spinal trigeminal nucleusleft
Spinal trigeminal nucleus interpolar part caudal dorsomedialleft
Spinal trigeminal nucleus interpolar part caudal halfleft
Ventral part of caudal trigeminal nucleus of interpolaris partleft
Caudalmost part of the trigeminal interpolar nucleusleft

Output to

NameSideAbbr.WeightDetails
Facial nucleus intermediate partipsi7i1
Facial nucleus lateral subnucleusipsi7L1
Facial nucleus medial partipsi7M1
Principal sensory trigeminal nucleusipsiPr53
Spinal trigeminal nucleus interpolar partipsiSp5I-0.5
Superior vestibular nucleus ventral partipsiSuVeV0
Central medial thalamic nucleusipsiCM-0.5
Gelatinosus thalamic nucleusipsiG-0.5
Mediodorsal thalamic nucleusipsiMD-0.5
Submedius thalamic nucleusipsiSub3
Reuniens thalamic nucleusipsiRe-0.5
Ventromedial thalamic nucleusipsiVM-0.5
Central gray mesencephalic part intercollicular levelcontraCGMint-0.5
Facial nucleuscontra71
Gelatinosus thalamic nucleuscontraG-0.5
Submedius thalamic nucleuscontraSub2

Input from

NameSideAbbr.WeightDetails
Middle cerebral arteryipsimcer3
Superior colliculusipsiSC0
Superior colliculus lateral partipsiSCL0
Rostrocaudal extent of the superior colliculus lateral partipsiSCLrce0
Superior colliculus medial partipsimSC0
Superior colliculus rostral medial partipsiSCRM0
Superior colliculus rostral medial part layer 1ipsiSCRML10
Superior colliculus rostral medial part layer 2ipsiSCRML20
Superior colliculus rostral medial part layer 3ipsiSCRML30
Superior colliculus rostral medial part layer 4ipsiSCRML40
Superior colliculus rostral medial part layer 5ipsiSCRML50
Superior colliculus centeripsiSCC0
Superior colliculus center rostrocaudal extentipsiSCCrce0
Trigeminal ganglionipsi5Gn3
Spinal vestibular nucleusipsiSpVe-0.5
Lateral vestibular nucleusipsiLVe1
Lateral agranular prefrontal cortexipsiAGl0
Primary somatosensory cortexipsiS13
Posteromedial barrel subfield vibrissae row CipsiPMBSFC3
Posteromedial barrel subfield vibrissae row DipsiPMBSFD3
Primary somatosensory cortex layer 5 bipsiS1L5b-0.5
Secondary somatosensory cortexipsiS23
Secondary somatosensory cortex layer 5bipsiS2L5b-0.5
C1 C2 anastomosis suboccipital nerve dorsal spinal nerve C2ipsic1c2a3
Cutaneous branch of the mylohyoid nerveipsicmyhy1.5
Greater occipital nerveipsiPNSgo-0.5
Palatine nerveipsipala0.5
Rapid adaptors of the lingual mucosaipsiOrgOCTRA-0.5
CorneaipsiOrgsCorn3
Facial skin of the snoutipsiOrgBSfsnou-0.5
Nociceptive receptorsipsiOrgBSfaceNR-0.5
Supraorbital whiskersipsiSuOrW-0.5
Large supraorbital vibrissaeipsiLSuOrW3
Small supraorbital vibrissaeipsiSSuOrW-0.5
Vibrissal follicle complex quadrant between row A and BipsiVFCQab1
Vibrissal follicle complex quadrant between row D and EipsiVFCQde1
Vibrissal follicle complex A1ipsiVFCA11
Vibrissal follicle complex A4ipsiVFCA41
Vibrissal follicle complex B3ipsiVFCB3-0.5
Vibrissal follicle complex E1ipsiVFCE11
Vibrissal follicle complex slowly adapting type 2a primary afferentsipsiVFCsa2a-0.5
Mystacial guard hairipsiOrgMGuH-0.5
Rostral upper lip nociceptice receptorsipsiOrgRULnr-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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