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Rat connectome

Mediodorsal thalamic nucleus left

Abbreviation	MD
Color
Superior regions	Medial group of the dorsal thalamus

Synonyms	Abbr.	Language
	MED
Mediodorsal thalamic nucleus of the thalamus
Mediodorsal nucleus of the thalamus
Dorsomedial thalamic nucleus		Eng
Dorsomedial nucleus of thalamus
Medial dorsal thalamic nucleus
Dorsomedial thalamus
Medial dorsal nucleus		Eng
Mediodorsal thalamic nucleus	MD	Eng
Dorsomedial nucleus of the thalamus		Eng
Mediodorsal nucleus
Mediodorsal nuclear area of the thalamus		Eng
Mediodorsal thalamic nucleus	MDTh	Eng

Subregions	Side
Intermediodorsal thalamic nucleus	left
Mediodorsal thalamic nucleus anterior part	left
Mediodorsal thalamic nucleus caudal part	left
Mediodorsal thalamic nucleus caudomedial part	left
Mediodorsal thalamic nucleus central part	left
Mediodorsal thalamic nucleus dorsal part	left
Mediodorsal thalamic nucleus dorsocentral part	left
Mediodorsal thalamic nucleus dorsomedial part	left
Mediodorsal thalamic nucleus lateral part	left
Mediodorsal thalamic nucleus laterodorsal part	left
Mediodorsal thalamic nucleus medial part	left
Mediodorsal thalamic nucleus paralaminar part	left
Mediodorsal thalamic nucleus posterior part	left
Mediodorsal thalamic nucleus posterodorsal part	left
Mediodorsal thalamic nucleus rostral part	left
Mediodorsal thalamic nucleus rostrocaudal part	left
Mediodorsal thalamic nucleus rostromedial part	left
Mediodorsal thalamic nucleus ventral part	left
Mediodorsal thalamic nucleus ventrolateral part	left
Mediodorsal thalamic nucleus ventromedial part	left
Mediodorsal thalamic nucleus centromedial portion	left
Mediodorsal thalamic nucleus intermediate part	left
Mediodorsal thalamic nucleus middle part	left
Dorsolateral part of the mediodorsal thalamic nucleus	left
Mediodorsal thalamic nucleus basal part	left
Mediodorsal thalamic nucleus paralemellar division	left
Mediodorsal thalamic nucleus intermediate level of the rostrocaudal axis	left
Mediodorsal thalamic nucleus dorsoventral part	left
Mediodorsal thalamic nucleus marginal zone	left

Output to

Name	Side	Abbr.	Weight
Vein	ipsi	V	-0.5
Central gray	ipsi	CG	2
Paralemniscal nucleus	ipsi	PL	2
Superior colliculus	ipsi	SC	-0.5
Rostromedial tegmental nucleus	ipsi	RMTg	3
Substantia nigra A9	ipsi	SN	1
Ventral tegmental area A10	ipsi	VTA	3
Reticular system	ipsi	RF	3
Pontine reticular nucleus oral part	ipsi	PnO	-0.5
Dorsal raphe nucleus	ipsi	DR	2
Linear nucleus of the raphe	ipsi	LIR	1
Median raphe nucleus	ipsi	MnR	1
Rostral ventral respiratory group	ipsi	RVRG	0.5
Prosencephalon	ipsi	PRC	-0.5
Endopiriform system	ipsi	EnN	-0.5
Ventral endopiriform nucleus	ipsi	VEn	1
Islands of Calleja	ipsi	ICj	2
Diagonal band of Broca	ipsi	DBB	2
Basal nucleus Meynert medial part	ipsi	Bmp	2
Substantia innominata	ipsi	SI	-0.5
Lateral preoptic area	ipsi	LPO	2.5
Medial preoptic area	ipsi	MPA	0
Medial preoptic nucleus	ipsi	MPO	2.5
Lateral hypothalamic area	ipsi	LH	3
Dorsal hypothalamic area	ipsi	DA	2
Dorsomedial hypothalamic nucleus [Medial zone]	ipsi	DM	2
Posterior hypothalamic nucleus	ipsi	PH	3
Ventromedial hypothalamic nucleus	ipsi	VMH	1.5
Periventricular zone	ipsi	PVZ	0
Arcuate nucleus	ipsi	Arc	2
Paraventricular hypothalamic nucleus	ipsi	Pa	0
Suprachiasmatic nucleus	ipsi	SCh	2
Posterior mammillay nucleus	ipsi	PMAM	3
Submammillothalamic nucleus	ipsi	SMT	2.5
Supramammillar nucleus	ipsi	SuM	1
Central medial thalamic nucleus	ipsi	CM	2
Midline in the central medial thalamic nucleus	ipsi	CMmi	0
Centrolateral thalamic nucleus	ipsi	CL	-0.5
Gelatinosus thalamic nucleus	ipsi	G	2
Parafascicular thalamic nucleus	ipsi	PF	-2
Rhomboid thalamic nucleus	ipsi	Rh	2
Mediodorsal thalamic nucleus	ipsi	MD	0
Intermediodorsal thalamic nucleus	ipsi	IMD	0
Paratenial thalamic nucleus	ipsi	PT	-0.5
Paraventricular thalamic nucleus	ipsi	PV	-0.5
Reuniens thalamic nucleus	ipsi	Re	2
Ventromedial thalamic nucleus	ipsi	VM	2
Ventral thalamus	ipsi	VNT	1.5
Reticular thalamic nucleus	ipsi	Rt	1
Reticular thalamic nucleus caudal part	ipsi	Rtc	1
Reticular thalamic nucleus external part	ipsi	Rtex	2
Reticular thalamic nucleus ventral part	ipsi	RtV	2
Zona incerta	ipsi	ZI	3
Tuber cinereum area	ipsi	TC	1.5
Lateral habenular nucleus	ipsi	LHb	-2
Lateral habenular nucleus lateral part	ipsi	LHbL	-0.5
Internal capsule	ipsi	ic	-2
Medial forebrain bundle	ipsi	mfb	3
Dorsal bank of the anterior portion of the rhinal fissure	ipsi	darf	3
Amygdaloid complex	ipsi	AC	1
Basal nucleus	ipsi	Bnc	2
Basal dorsal nucleus anterior pole	ipsi	BnDa	-0.5
Basal nucleus anterior subdivision	ipsi	BncA	3
Basal nucleus ventral divison	ipsi	BncV	2
Basolateral amygdaloid nucleus	ipsi	BL	1
Anterior basolateral nucleus	ipsi	BLA	-0.5
Basolateral amygdaloid nucleus ventral part	ipsi	BLve	-0.5
Basolateral nucleus medial portion	ipsi	BLmp	-0.5
Posterior basolateral nucleus	ipsi	BLP	-0.5
Ventral basolateral nucleus	ipsi	BLV	1.5
Posterior basomedial nucleus	ipsi	BMP	1.5
Caudal basal amygdaloid nucleus	ipsi	Bncc	-0.5
Lateral amygdaloid nucleus	ipsi	LA	-0.5
Dorsolateral part of the lateral nucleus	ipsi	LaDL	2
Posterior part of the lateral nucleus	ipsi	LAP	-0.5
Ventromedial part of the lateral nucleus	ipsi	LaVM	2
Bed nucleus of the stria terminalis intraamygdaloid division	ipsi	BSTIA	2
Central amygdaloid nucleus	ipsi	Ce	3
Capsule like area surrounding central amygdaloid nucleus	ipsi	Cec	2
Central part	ipsi	CeLc	-0.5
Anterior amygdaloid area	ipsi	AA	2.5
Anterior cortical amygdaloid nucleus	ipsi	ACo	2
Posterolateral cortical nucleus	ipsi	PLCo	2
Periamygdaloid complex	ipsi	PAC	1
Medial amygdaloid nucleus	ipsi	Me	-0.5
Medial amygdaloid nucleus anterior part	ipsi	MeAn	0.5
Amygdalohippocampal area	ipsi	AHi	2
Basal ganglia	ipsi	BG	-0.5
Claustrum	ipsi	Cl	-0.5
Globus pallidus	ipsi	GP	1
Lateral globus pallidus	ipsi	LGP	3
Medial globus pallidus	ipsi	MGP	2
Ventral pallidum	ipsi	VP	2
Accumbens nucleus	ipsi	Ac	-0.5
Accumbens nucleus anteromedial part	ipsi	AcAM	3
Lateral core	ipsi	AcbCl	-0.5
Accumbens nucleus shell	ipsi	AcbSh	-0.5
Dorsomedial shell	ipsi	AcbShdm	-0.5
Lateral accumbens shell	ipsi	AcbShl	2
Medial accumbens shell	ipsi	AcbShm	2
Lateral nucleus accumbens	ipsi	Acl	0.5
Medial accumbens	ipsi	AcbM	0.5
Caudate putamen	ipsi	CPu	3
Medial striatum	ipsi	CPum	0
Caudalmost striatum	ipsi	CPucmo	0
Dorsal striatum	ipsi	CPud	2
Mediodorsal striatum	ipsi	CPuMD	-0.5
Rostral striatum	ipsi	CPur	2
Rostral most region of the striatum	ipsi	CPurmo	1
Ventromedial striatum	ipsi	CPuvm	2
Subthalamic nucleus	ipsi	STh	2
Cerebral cortex	ipsi	CEC	-0.5
Dorsal hippocampus	ipsi	HIPPd	-0.5
Subiculum	ipsi	S	0
Subiculum dorsal part	ipsi	Sd	1
Subiculum ventral part	ipsi	Sv	3
Entorhinal cortex	ipsi	Ent	3
Lateral entorhinal cortex	ipsi	LEnt	3
Piriform cortex	ipsi	Pir	3
Prepiriform cortex	ipsi	PRPIR	1
Retrosplenial regions	ipsi	RS	1
Retrosplenial dorsal	ipsi	RSd	0
Retrosplenial cortex	ipsi	RSCx	-0.5
Cingulate cortex	ipsi	Cg	3
Anterior cingulate cortex	ipsi	ACC	3
Anterior cingulate cortex anterior part layer 1b	ipsi	ACCaL1b	-0.5
Anterior cingulate cortex anterior part layer 2	ipsi	ACCaL2	-0.5
Anterior cingulate cortex anterior part layer 3	ipsi	ACCaL3	-0.5
Cingulate cortex area 1	ipsi	Cg1	3
Cingulate cortex area 2	ipsi	Cg2	2
Cingulate cortex area 3	ipsi	Cg3	3
Dorsal anterior cingulate cortex	ipsi	DACC	-0.5
Dorsal anterior cingulate cortex layer 3	ipsi	DACCL3	-0.5
Cingulate cortex layer 1	ipsi	CgL1	1.5
Middle cingulate cortex	ipsi	MCC	-0.5
Posterior cingulate cortex	ipsi	PCC	-0.5
Prelimbic cortex	ipsi	PrL	3
Prelimbic cortex layer 3	ipsi	PrLL3	2
Prelimbic cortex layer 4	ipsi	PrLL4	-0.5
Infralimbic area	ipsi	iLA	3
Infralimbic cortex	ipsi	IL	3
Neocortex	ipsi	NEOCX	-0.5
Frontal association cortex	ipsi	FrA	3
Frontal association cortex lateroventral part	ipsi	FrALV	0
Frontal cortex area 1	ipsi	Fr1	2
Frontal cortex area 2	ipsi	Fr2	3
Frontal cortex area 2 anterior part	ipsi	Fr2a	2
Frontal cortex area 2 caudal part	ipsi	Fr2C	3
Frontal cortex area 2 rostral part	ipsi	Fr2R	3
Frontal cortex area 2 layer 3	ipsi	Fr2L3	-0.5
Frontal cortex area 2 layer 1b	ipsi	Fr2L1b	-0.5
Frontal cortex area 2 layer 2	ipsi	Fr2L2	-0.5
Most ventral part of the pregenual part of the anteromedial cortex	ipsi	Fr2mvpg	3
Parietal association cortex	ipsi	PtA	2
Lateral parietal association cortex	ipsi	LPtA	1
Medial parietal association cortex	ipsi	MPtA	1
Parietal cortex posterior area caudal part of the lateral portion	ipsi	ParPcL	-0.5
Parietal cortex posterior area medial portion	ipsi	mPPC	1
Parietal cortex posterior area rostrocaudal extent of the medial portion	ipsi	mrcPPC	1
Infragranular layers of the auditory cortex	ipsi	AULi	-0.5
Frontal polar cortex	ipsi	FP	1
Frontal polar cortex dorsal part	ipsi	FPd	-0.5
Insular cortex	ipsi	ICX	3
Agranular insular cortex	ipsi	AI	2
Agranular insular cortex anterior part	ipsi	AIA	-0.5
Agranular insular cortex dorsal part	ipsi	AID	3
Agranular insular cortex dorsal part layer 3	ipsi	AIDL3	-0.5
Agranular insular cortex dorsal part superficial layers	ipsi	AIDsL	3
Agranular insular cortex dorsal part rostral subdivision layer 1	ipsi	AIDrL1	2
Agranular insular cortex dorsal part rostral subdivision layer 3	ipsi	AIDrL3	2
Agranular insular cortex dorsal part rostral subdivision layer 5	ipsi	AIDrL5	2
Agranular insular cortex intermediate part	ipsi	AIim	2
Agranular insular cortex layer 5	ipsi	AIL5	1
Agranular insular cortex layer 6	ipsi	AIL6	1
Agranular insular cortex layer 1	ipsi	AIL1	2
Agranular insular cortex layer 3	ipsi	AIL3	2
Agranular insular cortex layer 4	ipsi	AIL4	2
Agranular insular cortex rostral part	ipsi	RAIC	3
Agranular insular cortex rostral caudal part	ipsi	RCAIC	2
Agranular insular cortex posterior part	ipsi	AIP	2
Agranular insular cortex ventral part	ipsi	AIV	-0.5
Agranular insular cortex ventral part layer 3	ipsi	AIVL3	-0.5
Agranular insular cortex ventral part jaw movement area	ipsi	AIVjm	-0.5
Dysgranular insular cortex	ipsi	DI	3
Granular insular cortex	ipsi	GI	0.5
Border region of the agranular and granular insular cortex ventral part	ipsi	AGbGICXv	3
Perirhinal cortex	ipsi	A35	2
Ectorhinal cortex	ipsi	A36	0
Prefrontal cortex	ipsi	PFC	3
Prefrontal cortex layer 1	ipsi	PFCL1	1
Prefrontal cortex layer 2	ipsi	PFCL2	1
Prefrontal cortex layer 3	ipsi	PFCL3	2
Prefrontal cortex layer 4	ipsi	PFCL4	1
Prefrontal cortex layer 5	ipsi	PFCL5	1
Prefrontal cortex layer 6	ipsi	PFCL6	1
Prefrontal cortex supragenual part	ipsi	sgPFC	3
Pregenual sector of the prefrontal cortex	ipsi	pgPFC	-0.5
Ventral part of the pregenual sector of the prefrontal cortex	ipsi	vpgPFC	4
Dorsal part of the pregenual sector of the prefrontal cortex	ipsi	dpgPFC	3
Lateral prefrontal cortex	ipsi	lPFC	-0.5
Lateral agranular prefrontal cortex	ipsi	AGl	1
Caudal forelimb motor area	ipsi	CFMA	1.5
Rostral forelimb motor area	ipsi	RFMA	3
Rostral part of lateral agranular prefrontal cortex	ipsi	AGlr	1
Whiskers motor cortex	ipsi	WMCx	2
Rostral motor area	ipsi	RMA	2
Medial prefrontal cortex	ipsi	mPFC	3
Medial prefrontal cortex dorsal part	ipsi	mPFCd	0.5
Medial prefrontal cortex layer 5	ipsi	mPFCL5	-0.5
Medial prefrontal cortex layer 6	ipsi	mPFCL6	-0.5
Medial prefrontal cortex layer 3	ipsi	mPFCL3	2
Medial prefrontal cortex layer 4	ipsi	mPFCL4	2
Medial prefrontal cortex layer 1	ipsi	mPFCL1	2
Medial prefrontal cortex layer 2	ipsi	mPFCL2	-0.5
Medial prefrontal cortex ventral part	ipsi	mPFCV	0.5
Medial prefrontal cortex posterior part	ipsi	mPFCp	0
Medial agranular prefrontal cortex	ipsi	AGm	1
Medial agranular prefrontal cortex rostral part	ipsi	rAGm	2
Medial agranular prefrontal cortex rostral part layer 1	ipsi	rAGmL1	-1
Posterior part of the medial agranular prefrontal cortex	ipsi	PoAGm	-0.5
Primary somatosensory cortex	ipsi	S1	1
Caudal whisker area	ipsi	CS1BF	1
Rostral whisker area	ipsi	RS1BF	2
Primary somatosensory cortex layer 4	ipsi	S1L4	-0.5
Primary somatosensory cortex forelimb region rostral part	ipsi	S1FLR	3
Primary somatosensory cortex rostral part	ipsi	S1r	0
Primary visual cortex	ipsi	V1	1
Secondary visual cortex	ipsi	V2	-0.5
Lateral extrastriate cortex	ipsi	VISxL	1
Medial extrastriate cortex	ipsi	VISM	1
Orbitofrontal cortex	ipsi	OrFCx	-0.5
Anterior medial frontal cortex	ipsi	AMFC	1
Orbital cortex	ipsi	OrC	2
Lateral orbital cortex	ipsi	LO	3
Lateral orbital cortex layer 1b	ipsi	LOLaL1b	-0.5
Lateral orbital cortex layer 2	ipsi	LOLaL2	-0.5
Lateral orbital cortex layer 3	ipsi	LOLaL3	2
Medial orbital cortex	ipsi	MO	3
Ventral orbital cortex	ipsi	VO	2
Rostral ventral orbital cortex	ipsi	RVO	-0.5
Ventral orbital cortex layer 1b	ipsi	VOL1b	-0.5
Ventral orbital cortex layer 2	ipsi	VOL2	-0.5
Ventral orbital cortex layer 3	ipsi	VOL3	-0.5
Ventrolateral orbital area	ipsi	VLO	2
Ventrolateral orbital area posterior part	ipsi	VLOp	1
Orbital prefrontal cortex	ipsi	oPFC	-0.5
Ventral lateral geniculate nucleus	ipsi	VLG	-0.5
Ventral lateral geniculate nucleus magnocellular part	ipsi	VLGMC	1
Ventral lateral geniculate nucleus parvicellular part	ipsi	VLGPC	4
Interpeduncular nucleus	ipsi	IP	3
Olfactory bulb A16	ipsi	MOB	-1
Olfactory tubercle lateral part	ipsi	TuOL	0.5
Lateral septal nucleus	ipsi	LS	-0.5
Lateral septal nucleus intermediate part	ipsi	LSI	2.5
Septofimbrial nucleus	ipsi	SFi	2
Triangular septal nucleus	ipsi	TS	2
Intermediolateral cell column	ipsi	IML	-0.5
Central gray	contra	CG	1
Substantia nigra A9	contra	SN	0
Dorsal raphe nucleus	contra	DR	1.5
Linear nucleus of the raphe	contra	LIR	0
Median raphe nucleus	contra	MnR	0
Rostral ventral respiratory group	contra	RVRG	0.5
Islands of Calleja	contra	ICj	1
Diagonal band of Broca	contra	DBB	0
Lateral preoptic area	contra	LPO	1.5
Medial preoptic nucleus	contra	MPO	1.5
Lateral hypothalamic area	contra	LH	3
Dorsal hypothalamic area	contra	DA	0
Dorsomedial hypothalamic nucleus [Medial zone]	contra	DM	1
Posterior hypothalamic nucleus	contra	PH	2
Ventromedial hypothalamic nucleus	contra	VMH	1
Arcuate nucleus	contra	Arc	1
Posterior mammillay nucleus	contra	PMAM	1
Submammillothalamic nucleus	contra	SMT	1
Supramammillar nucleus	contra	SuM	1
Dorsal thalamus	contra	DOR	0
Posterior thalamic nuclear group	contra	Po	2
Mediodorsal thalamic nucleus	contra	MD	3
Reuniens thalamic nucleus	contra	Re	1
Lateral thalamic nuclear group	contra	LTNG	2
Reticular thalamic nucleus	contra	Rt	2
Reticular thalamic nucleus rostral part	contra	Rtr	-0.5
Reticular thalamic nucleus ventral part	contra	RtV	2
Zona incerta	contra	ZI	2
Zona incerta dorsal part	contra	ZID	2
Tuber cinereum area	contra	TC	0
Medial forebrain bundle	contra	mfb	3
Anterior amygdaloid area	contra	AA	1.5
Lateral globus pallidus	contra	LGP	0
Accumbens nucleus shell	contra	AcbSh	-0.5
Dorsomedial shell	contra	AcbShdm	-0.5
Caudate putamen	contra	CPu	0
Subiculum	contra	S	-3
Subiculum dorsal part	contra	Sd	0
Subiculum ventral part	contra	Sv	0
Piriform cortex	contra	Pir	2
Cingulate cortex	contra	Cg	0
Anterior cingulate cortex	contra	ACC	2
Cingulate cortex area 1	contra	Cg1	-0.5
Cingulate cortex area 2	contra	Cg2	2
Prelimbic cortex	contra	PrL	2
Infralimbic cortex	contra	IL	2
Parietal association cortex	contra	PtA	2
Infragranular layers of the auditory cortex	contra	AULi	-0.5
Insular cortex	contra	ICX	1
Agranular insular cortex dorsal part	contra	AID	3
Agranular insular cortex ventral part	contra	AIV	-0.5
Dysgranular insular cortex	contra	DI	-0.5
Whiskers motor cortex	contra	WMCx	-0.5
Medial agranular prefrontal cortex	contra	AGm	2
Anterior medial frontal cortex	contra	AMFC	0
Orbital cortex	contra	OrC	2
Lateral orbital cortex	contra	LO	0.5
Ventrolateral orbital area posterior part	contra	VLOp	0
Ventral lateral geniculate nucleus	contra	VLG	-0.5
Lateral septal nucleus intermediate part	contra	LSI	0.5
Septofimbrial nucleus	contra	SFi	1.5
Triangular septal nucleus	contra	TS	0.5
Vagus nerve	ipsi	AutoV	1

Input from

Name	Side	Abbr.	Weight
Central gray	ipsi	CG	3
Central gray dorsomedial	ipsi	CGDM	-0.5
Central gray pons part	ipsi	CGP	3
Medial longitudinal fasciculus	ipsi	mlf	3
Paralemniscal nucleus	ipsi	PL	-1
Nucleus of Darkschewitsch	ipsi	Dk	1
Periaqueductal gray	ipsi	PAG	3
Aqueductal part of periaqueductal gray	ipsi	APAG	1
Lateral periaqueductal gray	ipsi	LPAG	1
Periaqueductal gray dorsal part	ipsi	PAGd	1
Ventral periaqueductal gray	ipsi	VPAG	2
Ventrolateral periaqueductal gray	ipsi	VLPAG	1.5
Periventricular gray matter	ipsi	PVG	-0.5
Superior colliculus	ipsi	SC	4
Intermediate gray layer of the superior colliculus	ipsi	InG	-0.5
Intermediate white layer of the superior colliculus	ipsi	InWh	-0.5
Intermediate white layer lower part of the superior colliculus	ipsi	InWh2	-0.5
Superior colliculus deep layers	ipsi	SCd	2
Deep gray layer of the superior colliculus	ipsi	DpG	-0.5
Tegmental area	ipsi	TGA	-0.5
Central tegmental field	ipsi	TGAC	2
Mesopontine tegmental area	ipsi	TGAm	2
Peduncularpontine nucleus	ipsi	PPN	-0.5
Peduncularpontine nucleus caudal levels	ipsi	PPNCa	-0.5
Subpeduncular tegmental nucleus	ipsi	SPTg	0
Substantia nigra A9	ipsi	SN	3
Substantia nigra compact part	ipsi	SNC	3
Substantia nigra compact part dorsal tier	ipsi	SNCD	2
Substantia nigra compact part ventral tier dopaminergic neuron population	ipsi	SNCVdopa	0.5
Substantia nigra lateral part	ipsi	SNL	3
Substantia nigra reticular part	ipsi	SNR	3
Substantia nigra reticular part central division	ipsi	SNRce	-0.5
Substantia nigra reticular part lateral tier	ipsi	SNRL	-0.5
Substantia nigra reticular part medial tier	ipsi	SNRm	1
Substantia nigra reticular part rostrolateral subdivision	ipsi	SNRRL	-0.5
Substantia nigra reticular part ventral subdivision	ipsi	SNRv	1
Substantia nigra reticular part ventrolateral tier	ipsi	SNRVL	-0.5
Substantia nigra reticular part ventromedial tier	ipsi	SNRVM	1
Ventral tegmental area A10	ipsi	VTA	3
Parabrachial pigmented nucleus	ipsi	PBP	2
Caudal linear nucleus of the raphe	ipsi	CLi	3
Retrorubral nucleus	ipsi	RR	2.5
Laterodorsal tegmental nucleus	ipsi	LDTg	3
Laterodorsal tegmental nucleus rostral half	ipsi	LDTgrh	3
Dorsal tegmental nucleus	ipsi	DTg	3
Dorsal tegmental nucleus dorsal part	ipsi	DTgD	0
Dorsal tegmental nucleus lateral part	ipsi	DLTN	2
Ventromedial part of the ventral aprt of the dorsal tegmental nucleus	ipsi	DTgVVM	0
Pedunculopontine tegmental nucleus	ipsi	PPTg	1
Pedunculopontine tegmental nucleus pars compacta	ipsi	PPNC	2
Pedunculopontine tegmental nucleus pars dissipata	ipsi	PPNd	-0.5
Interstitial nucleus of Cajal	ipsi	InC	1
Lateral cerebellar nucleus rostral part	ipsi	CERLr	0.5
A5 noradrenaline cells	ipsi	A5	0
Barringtons nucleus	ipsi	Bar	1
Locus coeruleus	ipsi	LC	4
Locus coeruleus rostral part	ipsi	LCRo	3
Nucleus incertus	ipsi	NI	0
Nucleus incertus pars dissipata	ipsi	NId	0.5
Caudal pons dorsal group	ipsi	PcaD	-0.5
Central part of the pontis caudalis	ipsi	PcaCe	-0.5
Medioventral part of the nucleus pontis oralis	ipsi	PorMV	-0.5
Pontomesencephalic gray	ipsi	PoMG	-0.5
Dorsomedial tegmental area	ipsi	DMTg	1
Prepositus nucleus	ipsi	Pr	2
Reticular system	ipsi	RF	3
Intermediate reticular nucleus	ipsi	IRt	0
Mesencephalic reticular formation	ipsi	MRF	1
Deep mesencephalic nucleus	ipsi	DpMe	2
Deep mesencephalic nucleus lateral part	ipsi	DpMeL	2
Deep mesencephalic nucleus medial part	ipsi	DpMeM	1
Pontine reticular nucleus oral part	ipsi	PnO	1
Pontine reticular nucleus ventral part	ipsi	PnV	0
Pontine reticular nucleus caudal part	ipsi	PNC	-0.5
Cuneiforme nucleus	ipsi	CnF	2
Dorsomedial cuneiforme nucleus	ipsi	CnFdm	3
Parabrachial nucleus	ipsi	PB	3
Central medial parabrachial nucleus waist	ipsi	CMPBw	-1
Lateral parabrachial nucleus external part	ipsi	LPBE	-1
Lateral parabrachial nucleus ventral part	ipsi	LPBV	-1
Medial parabrachial nucleus external part	ipsi	MPBE	-1
Gigantocellular reticular nucleus	ipsi	Gi	-0.5
Gigantocellular reticular nucleus alpha part	ipsi	GiA	-0.5
Lateral reticular nucleus	ipsi	LRt	3
Medullary reticular nucleus	ipsi	MdD	0
Subnucleus reticularis dorsalis	ipsi	SRD	0
Medullary reticular nucleus ventrolateral part	ipsi	MdVL	-0.5
Medullary reticular nucleus ventral part	ipsi	MdV	0
Parvicellular reticular nucleus	ipsi	PCRt	-0.5
Subcoeruleus nucleus	ipsi	SubC	1
Subcoeruleus nucleus dorsal part	ipsi	SubCD	1
Myelencephalon	ipsi	MYC	3
Medulla oblongata	ipsi	MeOb	-0.5
Facial nucleus caudal part	ipsi	7c	-0.5
Mesencephalic trigeminal nucleus	ipsi	Me5	3
Principal sensory trigeminal nucleus	ipsi	Pr5	2
Spinal trigeminal nucleus caudal part	ipsi	Sp5C	0.5
Spinal trigeminal nucleus interpolar part	ipsi	Sp5I	1.5
Spinal trigeminal nucleus interpolar part caudal	ipsi	Sp5Ic	-0.5
Spinal trigeminal nucleus oral part	ipsi	Sp5O	0.5
Vestibular nuclei	ipsi	Vnc	0
Medial vestibular nucleus caudal part	ipsi	MVeP	1
Medial vestibular nucleus intermediate part	ipsi	MVei	1
Medial vestibular nucleus ventromedial part	ipsi	MVevm	1
Nucleus of the solitary tract	ipsi	Sol	1
Nucleus of the solitary tract dorsal part	ipsi	SolD	-0.5
Parasolitary nucleus	ipsi	PSol	0
Dorsal motor nucleus of vagus	ipsi	10	0
Raphe nuclei	ipsi	RAN	2
Dorsal raphe nucleus	ipsi	DR	3
Dorsal raphe nucleus caudal part	ipsi	DRC	3
Dorsal raphe nucleus dorsal part	ipsi	DRD	3
Dorsal raphe nucleus rostral part	ipsi	DRr	3
Dorsal raphe nucleus ventral part	ipsi	DRV	3
Dorsal raphe nucleus ventrolateral part	ipsi	DRVL	4
Rostral linear nucleus of the raphe	ipsi	RLi	3
Median raphe nucleus	ipsi	MnR	3
Paramedian raphe nucleus	ipsi	PMnR	3
Pontine raphe nucleus	ipsi	PnR	1
Raphe interpositus nucleus	ipsi	RIP	1
Raphe magnus nucleus	ipsi	RMg	1
Raphe obscurus nucleus	ipsi	ROb	1
Raphe pallidus nucleus	ipsi	RPa	1
Rostral ventrolateral medulla	ipsi	RVLM	0
Cuneate nucleus	ipsi	Cu	1.5
Gracile	ipsi	Gra	1.5
Gracile nucleus principal part	ipsi	Gr	0
Nucleus of Bischoff	ipsi	NBi	0.5
Medulla oblongata rostral part	ipsi	MeObR	-0.5
Obex	ipsi	obex	-0.5
Inferior olive	ipsi	IO	1
Paragigantocellular reticular nucleus	ipsi	PGi	2
Dorsal paragigantocellular nucleus	ipsi	DPGi	0
Lateral paragigantocellular nucleus	ipsi	LPGi	0
Ventral medulla oblongata	ipsi	VMeO	-0.5
Ventral part of the ventral medulla oblongata	ipsi	VMeOV	-0.5
Basal forebrain	ipsi	BAF	3
Dorsal endopiriform nucleus	ipsi	DEn	-0.5
Rostrocaudal extent of the ventral endopiriform nucleus	ipsi	VEnRC	1
Islands of Calleja	ipsi	ICj	2
Diagonal band of Broca	ipsi	DBB	2
Nucleus of the horizontal limb of the diagonal band	ipsi	HDB	3
Lateral part of the nucleus of the horizontal limb of the diagonal band	ipsi	LPHDB	0
Nucleus of the vertical limb of the diagonal band	ipsi	VDB	2
Nucleus of the vertical limb of the diagonal band lateral part	ipsi	VDBL	0
Medial septal nucleus	ipsi	MS	0
Basal nucleus Meynert	ipsi	B	2.5
Basal nucleus Meynert caudal part	ipsi	Bca	2.5
Substantia innominata	ipsi	SI	3
Substantia innominata anterior part	ipsi	SIA	-0.5
Substantia innominata dorsal part	ipsi	SID	2
Substantia innominata rostral aspect	ipsi	SIr	2.5
Substantia innominata ventromedial part	ipsi	SIvm	1
Preoptic region	ipsi	PREO	2
Intermediate hypothalamic cell groups	ipsi	IHCG	3
Lateral preoptic area	ipsi	LPO	3
Lateral preoptic area anterior limit	ipsi	LPOaL	-0.5
Medial preoptic area	ipsi	MPA	3
Medial preoptic area dorsolateral part	ipsi	MPADL	1
Median preoptic area	ipsi	MnPA	-0.5
Magnocellular preoptic nucleus	ipsi	MCPO	-0.5
Medial preoptic nucleus	ipsi	MPO	1
Median preoptic nucleus	ipsi	MnPO	3
Tuberomammillary nucleus	ipsi	TuM	3
Dorsal cap of the vascular organ of the lamina terminalis	ipsi	VOLTdc	3
Lateral aspect of the vascular organ of the lamina terminalis	ipsi	LVOLT	3
Hypothalamus	ipsi	HYPO	-0.5
Dorsomedial hypothalamic nucleus	ipsi	DMHy	2
Lateral zone	ipsi	LHA	2
Lateral hypothalamic area	ipsi	LH	4
Lateral hypothalamic area perifornical part	ipsi	PFx	4
Tuberal division of the lateral hypothalamic area	ipsi	LHTC	-0.5
Medial division of the hypothalamus	ipsi	MdH	-0.5
Anterior hypothalamic area	ipsi	AHA	2
Anterior hypothalamic nucleus	ipsi	AHn	1
Dorsal hypothalamic area	ipsi	DA	2
Dorsomedial hypothalamic nucleus [Medial zone]	ipsi	DM	4
Posterior hypothalamic nucleus caudal part	ipsi	PHCa	1
Posterior hypothalamic nucleus rostral part	ipsi	PHRo	1
Tuberal area	ipsi	TA	-0.5
Ventromedial hypothalamic nucleus	ipsi	VMH	3
Ventromedial hypothalamic nucleus ventrolateral part	ipsi	VMHVL	1.5
Arcuate nucleus	ipsi	Arc	3
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]	ipsi	PaMP	-0.5
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]	ipsi	PaAP	-0.5
Ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]	ipsi	vPaAP	-0.5
Adjacent to the ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]	ipsi	PaAPav	-0.5
Paraventricular hypothalamic nucleus	ipsi	Pa	2
Anterior part of periventricular parvocellular subdivision of paraventricular hypothalamic nucleus	ipsi	PVPapvA	-0.5
Suprachiasmatic nucleus	ipsi	SCh	3
Suprachiasmatic nucleus dorsal division	ipsi	SChd	-0.5
Supraoptic hypothalamic part	ipsi	SOHYP	0
Incerto hypothalamic area	ipsi	icHYPO	-0.5
Medial mammillary nucleus lateral part	ipsi	ML	1
Medial mammillary nucleus medial part	ipsi	MM	-3
Medial mammillary nucleus median part	ipsi	MMnm	3
Medial mammillary nucleus posterior part	ipsi	MMNp	-1
Premammillary nucleus ventral part	ipsi	PMV	1
Supramammillar nucleus	ipsi	SuM	-0.5
Supramammillar nucleus lateral part lateral subpart	ipsi	SuMLL	2
Supramammillar nucleus lateral part medial subpart	ipsi	SuMLM	3
Supramammillar nucleus medial part	ipsi	SuMM	1
A8 dopamine cells retrorubral group	ipsi	RRF	1
Perifornical nucleus	ipsi	PeF	3
Thalamus	ipsi	T	3
Central medial thalamic nucleus	ipsi	CM	0
Central medial thalamic nucleus rostral part	ipsi	CMr	1
Centrolateral thalamic nucleus	ipsi	CL	3
Parafascicular thalamic nucleus lateral part	ipsi	PFL	1
Rhomboid thalamic nucleus	ipsi	Rh	-0.5
Mediodorsal thalamic nucleus	ipsi	MD	0
Intermediodorsal thalamic nucleus	ipsi	IMD	1
Mediodorsal thalamic nucleus central part	ipsi	MDC	2
Mediodorsal thalamic nucleus medial part	ipsi	MDM	3
Rostral three fourth of the mediodorsal thalamic nucleus	ipsi	MDrtf	2
Mediodorsal thalamic nucleus rostrocaudal part	ipsi	MDrc	2
Midline group of the dorsal thalamus	ipsi	MTN	2
Paratenial thalamic nucleus	ipsi	PT	0
Paraventricular thalamic nucleus	ipsi	PV	-0.5
Paraventricular thalamic nucleus anterior part	ipsi	PVA	0
Paraventricular thalamic nucleus caudal part	ipsi	PVca	1
Paraventricular thalamic nucleus dorsal part	ipsi	PVdo	1
Paraventricular thalamic nucleus posterior part	ipsi	PVP	0
Paraventricular thalamic nucleus rostral part	ipsi	PVr	1
Paraventricular thalamic nucleus ventral part	ipsi	PVV	1
Reuniens thalamic nucleus	ipsi	Re	1
Subfornical organ	ipsi	SFO	-0.5
Outer part of the subfornical organ	ipsi	SFOO	3
Reticular thalamic nucleus	ipsi	Rt	3
Reticular thalamic nucleus anteroventral part	ipsi	RtAV	1
Reticular thalamic nucleus medial part	ipsi	Rtm	-0.5
Subparafascicular thalamic nucleus	ipsi	SPF	2
Subparafascicular thalamic nucleus rostral part	ipsi	SPFr	1
Zona incerta	ipsi	ZI	3
Nucleus of the fields of Forel	ipsi	F	0.5
Habenula	ipsi	HAB	0
Lateral habenular nucleus	ipsi	LHb	2
Lateral habenular nucleus lateral part	ipsi	LHbL	3
Pretectal region	ipsi	PRT	2
Anterior pretectal nucleus	ipsi	APT	-0.5
Amygdaloid complex	ipsi	AC	2
Supranuclear divisions	ipsi	SUD	0.5
Basal nucleus	ipsi	Bnc	2
Accessory basal nucleus	ipsi	AB	2
Basolateral amygdaloid nucleus	ipsi	BL	1
Anterior basolateral nucleus	ipsi	BLA	2
Anterior basolateral nucleus caudomedial part	ipsi	BLAcm	0.5
Anterior basolateral nucleus medial part	ipsi	BLAM	3
External borders of the basolateral amygdala	ipsi	EBBL	-0.5
Internal border of the basolateral amygdala	ipsi	iBBL	-0.5
Middle third of basolateral amygdaloid nucleus	ipsi	BLmt	3
Posterior basolateral nucleus	ipsi	BLP	2
Medial external capsule dorsal to posterior basolateral amygdaloid nucleus	ipsi	BLPmec	3
Posterior basolateral nucleus caudal part	ipsi	BLPc	3
Ventral basolateral nucleus	ipsi	BLV	-0.5
Basomedial amygdaloid nucleus	ipsi	BM	1
Lateral amygdaloid nucleus	ipsi	LA	0
Bed nucleus of the stria terminalis	ipsi	BST	2
Bed nucleus of the stria terminalis fusiform part	ipsi	Fu	3
Bed nucleus of the stria terminalis intraamygdaloid division	ipsi	BSTIA	3
Bed nucleus of the stria terminalis lateral division	ipsi	BSTL	1
Bed nucleus of the stria terminalis ventral part	ipsi	BNSTv	2
Bed nucleus of the stria terminalis ventral tip	ipsi	BNSTvt	1
Central amygdaloid nucleus	ipsi	Ce	2
Central amygdaloid nucleus medial division	ipsi	CeM	3
Central amygdaloid nucleus rostral part	ipsi	Cerp	1.5
Interstitial nucleus of the posterior limb of the anterior commissure lateral part	ipsi	IPACL	1
Sublenticular extended amygdala	ipsi	SLEA	2
Anterior amygdaloid area	ipsi	AA	3
Anterior cortical amygdaloid nucleus	ipsi	ACo	3
Posterolateral cortical nucleus	ipsi	PLCo	1
Nucleus of the lateral olfactory tract	ipsi	LOT	3
Nucleus of the lateral olfactory tract layer 2	ipsi	LOTL2	1
Periamygdaloid complex	ipsi	PAC	2
Medial amygdaloid nucleus	ipsi	Me	3
Medial amygdaloid nucleus anteroventral part	ipsi	MeAV	1
Medial amygdaloid nucleus caudal part	ipsi	MeC	3
Medial amygdaloid nucleus posteroventral part	ipsi	MePV	-3
Amygdalohippocampal area	ipsi	AHi	2
White matter dorsal to amygdalohippocampal area	ipsi	AHiwm	2
Posteromedial cortical nucleus	ipsi	PMCo	-0.5
Intercalated nuclei of the amygdala	ipsi	I	-0.5
Anterior part of the claustrum	ipsi	ACl	2
Medial part of claustrum	ipsi	MCl	3
Globus pallidus	ipsi	GP	2
Caudal globus pallidus	ipsi	GPc	1
Lateral globus pallidus	ipsi	LGP	2
Medial globus pallidus	ipsi	MGP	2
Medial globus pallidus rostral part	ipsi	MGPr	1
Rostral globus pallidus	ipsi	GPr	1
Caudal subpallidal region	ipsi	CaSuPa	-0.5
Ventral pallidum	ipsi	VP	3
Ventral pallidum caudal part	ipsi	VPc	-0.5
Ventral pallidum dorsal part	ipsi	VPd	1
Ventral pallidum dorsolateral part	ipsi	VPdl	1
Ventral pallidum dorsomedial part	ipsi	VPdm	2
Ventral pallidum lateral part	ipsi	VPlp	3
Ventral pallidum medial part	ipsi	VPm	3
Ventral pallidum rostral part	ipsi	VPr	1
Ventral pallidum ventrolateral part	ipsi	VPvl	2
Fingers of the ventral pallidum that cap the islands of Calleja	ipsi	VPfic	-0.5
Globus pallidus central part	ipsi	GPce	2
Sublenticular subcommissural extrapallidal area	ipsi	SXP	2
Accumbens nucleus	ipsi	Ac	2
Accumbens nucleus core	ipsi	AcbC	1
Accumbens nucleus shell	ipsi	AcbSh	1
Medial accumbens	ipsi	AcbM	-0.5
Anteroventral segment of the striatum	ipsi	CPuav	-0.5
Ventral striatum	ipsi	CPuv	-3
Parasubthalamic nucleus	ipsi	PSTh	3
Bed nucleus of the anterior commissure	ipsi	BAC	0
Entorhinal cortex	ipsi	Ent	1
Lateral entorhinal cortex	ipsi	LEnt	1
Piriform cortex	ipsi	Pir	1
Anterior piriform cortex layer 6	ipsi	APIRCPIRlL6	2.5
Anterior piriform cortex ventrolateral part	ipsi	APIRCvL	-0.5
Central piriform cortex	ipsi	CPC	2
Piriform cortex deep layers	ipsi	PirLd	1
Prepiriform cortex	ipsi	PRPIR	-0.5
Prepiriform cortex layer 2	ipsi	PRPIRLa2	1
Prepiriform cortex layer 3	ipsi	PRPIRLa3	1
Prepiriform cortex layer 6	ipsi	PRPIRLa6	-0.5
Retrosplenial regions	ipsi	RS	-0.5
Cerebral cortex layer 1	ipsi	CCL1	0
Limbic regions	ipsi	LR	-0.5
Cingulate cortex	ipsi	Cg	3
Anterior cingulate cortex	ipsi	ACC	3
Anterior cingulate cortex layer 5	ipsi	ACCL5	1
Anterior cingulate cortex layer 6	ipsi	ACCL6	3
Anterior cingulate cortex rostral part	ipsi	ACCr	3
Cingulate cortex area 1	ipsi	Cg1	3
Cingulate cortex area 1 caudal part	ipsi	Cg1c	2
Cingulate cortex area 2 caudal part	ipsi	Cg2c	2
Cingulate cortex area 3	ipsi	Cg3	3
Cingulate cortex area 3 layer 6	ipsi	Cg3L6	-0.5
Dorsal anterior cingulate cortex	ipsi	DACC	3
Cingulate cortex layer 5	ipsi	CgL5	3
Cingulate cortex layer 6	ipsi	CgL6	3
Posterior cingulate cortex	ipsi	PCC	1
Posterior half of the cingulate cortex	ipsi	PCCh	0
Prelimbic cortex	ipsi	PrL	3
Prelimbic cortex caudal part	ipsi	PrLc	3
Prelimbic cortex dorsal part	ipsi	PrLd	3
Prelimbic cortex dorsal part layer 6	ipsi	PrLdL6	-0.5
Prelimbic cortex layer 2	ipsi	PrLL2	-0.5
Prelimbic cortex layer 3	ipsi	PrLL3	0.5
Prelimbic cortex layer 5	ipsi	PrLL5	2
Prelimbic cortex layer 6	ipsi	PrLL6	2
Prelimbic cortex rostral part	ipsi	PrLr	3
Prelimbic cortex ventral part	ipsi	PrLv	3
Infralimbic cortex	ipsi	IL	3
Infralimbic cortex layer 2	ipsi	ILL2	-0.5
Infralimbic cortex deep layers	ipsi	ILDL	2
Infralimbic cortex layer 6	ipsi	ILL6	3
Infralimbic cortex layer 3	ipsi	ILL3	0.5
Neocortex	ipsi	NEOCX	-0.5
Frontal association cortex	ipsi	FrA	3
Frontal cortex area 2	ipsi	Fr2	3
Frontal cortex medial aspect	ipsi	FrAma	3
Insular cortex	ipsi	ICX	3
Agranular insular cortex	ipsi	AI	2
Agranular insular cortex dorsal part	ipsi	AID	2.5
Agranular insular cortex intermediate part	ipsi	AIim	2
Agranular insular cortex layer 5	ipsi	AIL5	1
Agranular insular cortex layer 6	ipsi	AIL6	1
Agranular insular cortex layer 1	ipsi	AIL1	2
Agranular insular cortex layer 3	ipsi	AIL3	2
Agranular insular cortex rostral part	ipsi	RAIC	3
Agranular insular cortex rostral caudal part	ipsi	RCAIC	2
Agranular insular cortex posterior part	ipsi	AIP	1
Agranular insular cortex posterior part pressor site	ipsi	AIPp	1
Agranular insular cortex ventral part	ipsi	AIV	2.5
Agranular insular cortex ventral part jaw movement area	ipsi	AIVjm	-0.5
Dysgranular insular cortex layer 5	ipsi	DIL5	-0.5
Gustatory dysgranular insular cortex layer 5	ipsi	DIgL5	1
Gustatory dysgranular insular cortex layer 6	ipsi	DIgL6	1
Gustatory dysgranular insular cortex layer 2	ipsi	DIgL2	0.5
Gustatory dysgranular insular cortex layer 3	ipsi	DIgL3	0.5
Gustatory dysgranular insular cortex layer 4	ipsi	DIgL4	0.5
Dorsal part of the granular insular cortex rostroventrally adjacent to the rostralmost part of S2	ipsi	dGlrvs2	0
Medial insular cortex	ipsi	ICXM	3
Perirhinal cortex	ipsi	A35	-0.5
Perirhinal cortex anterior portion	ipsi	PRha	3
Perirhinal cortex anterior portion layer 3 to layer 5	ipsi	PRhaL3L5	0
Perirhinal cortex anterior portion layer 5 to layer 6	ipsi	PRhaL5L6	1
Perirhinal cortex anterior portion layer 6	ipsi	PRhaL6	2.5
Dorsal peduncular cortex	ipsi	DP	2.5
Ventral peduncular cortex	ipsi	PCv	2.5
Prefrontal cortex	ipsi	PFC	3
Prefrontal cortex dorsomedial part layer 4	ipsi	PFCdmL4	1
Prefrontal cortex dorsomedial part layer 5	ipsi	PFCdmL5	3
Prefrontal cortex dorsomedial part layer 6	ipsi	PFCdmL6	3
Prefrontal cortex layer 5	ipsi	PFCL5	3
Prefrontal cortex layer 6	ipsi	PFCL6	3
Motoric regions	ipsi	M	2
Lateral prefrontal cortex	ipsi	lPFC	-0.5
Lateral agranular prefrontal cortex	ipsi	AGl	3
Rostral part of lateral agranular prefrontal cortex	ipsi	AGlr	1
Medial prefrontal cortex	ipsi	mPFC	1
Medial prefrontal cortex layer 5	ipsi	mPFCL5	-0.5
Medial prefrontal cortex layer 5 type 1 pyramidal cell	ipsi	mPFCL5t1	-0.5
Medial agranular prefrontal cortex	ipsi	AGm	3
Medial agranular prefrontal cortex medial part	ipsi	mAGm	3
Medial agranular prefrontal cortex rostral part	ipsi	rAGm	2
Posterior part of the medial agranular prefrontal cortex	ipsi	PoAGm	-0.5
Sensory regions	ipsi	SR	-0.5
Primary somatosensory cortex	ipsi	S1	0.5
Primary somatosensory cortex rostral part	ipsi	S1r	0
Ventral medial prefrontal cortex	ipsi	vmPFC	-0.5
Medial extrastriate cortex	ipsi	VISM	2
Orbitofrontal cortex	ipsi	OrFCx	-0.5
Anterior medial frontal cortex	ipsi	AMFC	1
Orbital cortex	ipsi	OrC	1
Lateral orbital cortex	ipsi	LO	3
Medial orbital cortex	ipsi	MO	3
Ventral orbital cortex	ipsi	VO	3
Ventrolateral orbital area	ipsi	VLO	3
Lateral orbitofrontal cortex	ipsi	LOFC	-0.5
Ventral orbitofrontal cortex	ipsi	VOFC	-0.5
Nucleus of the posterior commissure	ipsi	PCom	2
Intergeniculate leaf	ipsi	IGL	-0.5
Ventral lateral geniculate nucleus	ipsi	VLG	-0.5
Ventral lateral geniculate nucleus magnocellular part	ipsi	VLGMC	1
Ventral lateral geniculate nucleus parvicellular part	ipsi	VLGPC	4
Interpeduncular nucleus	ipsi	IP	3
Interpeduncular nucleus lateral subnucleus	ipsi	IPL	2
Interpeduncular nucleus medial part ventral part	ipsi	IPMV	1
Interpeduncular nucleus paramedian part	ipsi	IPPM	1
Interpeduncular nucleus rostrolateral subnucleus	ipsi	IPRL	2
Olfactory tubercle	ipsi	TuO	2.5
Olfactory tubercle anterior part	ipsi	TuOA	2.5
Olfactory tubercle deep layers	ipsi	TuODL	1
Olfactory tubercle deep pallidal layer	ipsi	TuODpL	2
Olfactory tubercle polymorph layer	ipsi	TuOpo	2
Olfactory tubercle polymorph layer rostral part	ipsi	TuOpoR	-0.5
Olfactory tubercle rostral part	ipsi	TuOr	-0.5
Dorsal medial septum	ipsi	DMS	0
Dorsolateral septum	ipsi	DLSER	0
Septofimbrial nucleus	ipsi	SFi	3
Triangular septal nucleus	ipsi	TS	3
Ventrolateral septal region	ipsi	VLSER	0
3d ventricle	ipsi	3V	-2
Gray matter of the floor of the 4th ventricle	ipsi	GMF4V	0
Ependyma and subependymal layer	ipsi	E	-2
Lateral cervical nucleus	ipsi	LatC	1
Lateral spinal nucleus	ipsi	MESLn	1
Ventral root C1	ipsi	vrC1	-2
Spinal cord layer 1 C1	ipsi	SCL1C1	-0.5
Ventral root C2	ipsi	vrC2	-2
Spinal cord layer 1 C2	ipsi	SCL1C2	-0.5
Ventral root C3	ipsi	vrC3	-2
Ventral root C4	ipsi	vrC4	-2
Ventral root C5	ipsi	vrC5	-2
Cervical segment 6	ipsi	CS6	-0.5
Ventral root C6	ipsi	vrC6	-2
Cervical segment 7	ipsi	CS7	-0.5
Ventral root C7	ipsi	vrC7	-2
Lateral spinal nucleus C7	ipsi	LSpC7	1.5
Area X C7	ipsi	SCL10C7	0
Spinal cord layer 5 C7	ipsi	SCL5C7	0.5
Spinal cord layer 3 C7	ipsi	SCL3C7	0.5
Spinal cord layer 4 C7	ipsi	SCL4C7	0.5
Spinal cord layer 1 C7	ipsi	SCL1C7	0.5
Spinal cord layer 2 C7	ipsi	SCL2C7	0.5
Cervical segment 8	ipsi	CS8	-0.5
Ventral root C8	ipsi	vrC8	-2
Thoracal segment 1	ipsi	T1	-0.5
Thoracal segment 6	ipsi	T6	0
Thoracal segment 7	ipsi	T7	0
Thoracal segment 8	ipsi	T8	0
Thoracal segment 9	ipsi	T9	0
Thoracal segment 10	ipsi	T10	-0.5
Spinal cord layer 1 L1	ipsi	SCL1L1	2
Spinal cord layer 2 L1	ipsi	SCL2L1	1
Lumbar segment 3	ipsi	L3	-0.5
Lumbar segment 4	ipsi	L4	-0.5
Lumbar segment 6	ipsi	L6	0.5
Spinothalamic tract projection neurons	ipsi	STTP	-0.5
Central gray	contra	CG	0.5
Central gray pons part	contra	CGP	3
Tegmental area	contra	TGA	-0.5
Mesopontine tegmental area	contra	TGAm	1
Substantia nigra reticular part	contra	SNR	-0.5
Laterodorsal tegmental nucleus	contra	LDTg	3
Dorsal tegmental nucleus	contra	DTg	3
Dorsal tegmental nucleus lateral part	contra	DLTN	1
Pedunculopontine tegmental nucleus pars compacta	contra	PPNC	0.5
Pedunculopontine tegmental nucleus pars dissipata	contra	PPNd	-0.5
Dorsolateral hump	contra	CERcndl	2
Dorsomedial crest	contra	CERcndm	1
Interposed cerebellar nuclei	contra	ICN	2
Lateral cerebellar nucleus	contra	CERL	3
Lateral cerebellar nucleus parvicellular part	contra	LatPC	1
Lateral cerebellar nucleus rostral part	contra	CERLr	2
Medial cerebellar nucleus	contra	Med	-0.5
Medial cerebellar nucleus centromedial part	contra	CMMed	1
Medial cerebellar nucleus middle subdivision	contra	MMCM	1
Dorsolateral protuberance	contra	DLPr	1
Caudal pons dorsal group	contra	PcaD	-0.5
Central part of the pontis caudalis	contra	PcaCe	-0.5
Medioventral part of the nucleus pontis oralis	contra	PorMV	-0.5
Prepositus nucleus	contra	Pr	3
Deep mesencephalic nucleus	contra	DpMe	1
Dorsomedial cuneiforme nucleus	contra	CnFdm	1
Lateral reticular nucleus	contra	LRt	-0.5
Parvicellular reticular nucleus	contra	PCRt	-0.5
Principal sensory trigeminal nucleus	contra	Pr5	4
Principal sensory trigeminal nucleus dorsal boundary	contra	Pr5Db	1
Spinal trigeminal nucleus caudal part	contra	Sp5C	0.5
Spinal trigeminal nucleus interpolar part	contra	Sp5I	3
Spinal trigeminal nucleus oral part	contra	Sp5O	1
Medial vestibular nucleus caudal part	contra	MVeP	3
Dorsal raphe nucleus	contra	DR	1
Median raphe nucleus	contra	MnR	1
Cuneate nucleus	contra	Cu	3
Gracile	contra	Gra	3
Nucleus of Bischoff	contra	NBi	0.5
Basal forebrain	contra	BAF	0
Basal nucleus Meynert	contra	B	2.5
Basal nucleus Meynert caudal part	contra	Bca	2.5
Intermediate hypothalamic cell groups	contra	IHCG	-0.5
Dorsomedial hypothalamic nucleus	contra	DMHy	-0.5
Lateral zone	contra	LHA	-0.5
Lateral hypothalamic area	contra	LH	-0.5
Anterior hypothalamic area	contra	AHA	-0.5
Dorsal hypothalamic area	contra	DA	-0.5
Ventromedial hypothalamic nucleus	contra	VMH	-0.5
Ventromedial hypothalamic nucleus ventrolateral part	contra	VMHVL	-0.5
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]	contra	PaAP	-0.5
Ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]	contra	vPaAP	-0.5
Adjacent to the ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]	contra	PaAPav	-0.5
Paraventricular hypothalamic nucleus	contra	Pa	-0.5
Anterior part of periventricular parvocellular subdivision of paraventricular hypothalamic nucleus	contra	PVPapvA	-0.5
Perifornical nucleus	contra	PeF	-0.5
Centrolateral thalamic nucleus	contra	CL	1
Mediodorsal thalamic nucleus	contra	MD	3
Reticular thalamic nucleus	contra	Rt	2
Zona incerta	contra	ZI	1
Lateral habenular nucleus lateral part	contra	LHbL	1
Anterior basolateral nucleus medial part	contra	BLAM	3
Bed nucleus of the stria terminalis fusiform part	contra	Fu	3
Central amygdaloid nucleus	contra	Ce	-1
Nucleus of the lateral olfactory tract	contra	LOT	3
Lateral globus pallidus	contra	LGP	1
Parasubthalamic nucleus	contra	PSTh	3
Anterior cingulate cortex layer 5	contra	ACCL5	-0.5
Anterior cingulate cortex layer 6	contra	ACCL6	-0.5
Anterior cingulate cortex rostral part	contra	ACCr	3
Cingulate cortex area 3	contra	Cg3	2
Cingulate cortex area 3 layer 6	contra	Cg3L6	-0.5
Dorsal anterior cingulate cortex	contra	DACC	2.5
Prelimbic cortex	contra	PrL	2.5
Prelimbic cortex dorsal part layer 6	contra	PrLdL6	-0.5
Prelimbic cortex layer 5	contra	PrLL5	2
Prelimbic cortex layer 6	contra	PrLL6	2
Infralimbic cortex	contra	IL	2.5
Infralimbic cortex layer 5	contra	ILL5	-0.5
Frontal association cortex	contra	FrA	2
Frontal cortex area 2	contra	Fr2	-0.5
Parietal cortex ventral area caudal part	contra	ParVC	2
Agranular insular cortex	contra	AI	2
Agranular insular cortex dorsal part	contra	AID	2.5
Agranular insular cortex rostral part	contra	RAIC	1
Agranular insular cortex ventral part	contra	AIV	2.5
Dysgranular insular cortex layer 5	contra	DIL5	-0.5
Dorsal part of the granular insular cortex rostroventrally adjacent to the rostralmost part of S2	contra	dGlrvs2	0
Dorsal peduncular cortex	contra	DP	2.5
Prefrontal cortex	contra	PFC	1
Lateral agranular prefrontal cortex	contra	AGl	-0.5
Medial agranular prefrontal cortex	contra	AGm	3
Sensory regions	contra	SR	2
Anterior medial frontal cortex	contra	AMFC	2
Orbital cortex	contra	OrC	2
Lateral orbital cortex	contra	LO	2.5
Medial orbital cortex	contra	MO	2.5
Posterior orbital cortex	contra	OrCP	2
Ventrolateral orbital area	contra	VLO	2.5
Interpeduncular nucleus	contra	IP	1
Interpeduncular nucleus dorsolateral subnucleus	contra	IPDL	2
Lateral cervical nucleus	contra	LatC	1
Lateral spinal nucleus	contra	MESLn	1
Cervical segment 1	contra	CS1	4
Internal basilar nucleus C1	contra	IBC1	-0.5
Spinal cord layer 5 C1	contra	SCL5C1	2
Spinal cord layer 6 C1	contra	SCL6C1	2
Spinal cord layer 3 C1	contra	SCL3C1	2
Spinal cord layer 4 C1	contra	SCL4C1	2
Spinal cord layer 1 C1	contra	SCL1C1	-0.5
Intermediate zone C1	contra	izVHC1	-0.5
Cervical segment 2	contra	CS2	4
Internal basilar nucleus C2	contra	IBC2	-0.5
Spinal cord layer 5 C2	contra	SCL5C2	2
Spinal cord layer 6 C2	contra	SCL6C2	2
Spinal cord layer 3 C2	contra	SCL3C2	2
Spinal cord layer 4 C2	contra	SCL4C2	2
Spinal cord layer 1 C2	contra	SCL1C2	-0.5
Intermediate zone C2	contra	izVHC2	-0.5
Cervical segment 3	contra	CS3	3
Spinal cord layer 5 C3	contra	SCL5C3	2
Spinal cord layer 6 C3	contra	SCL6C3	2
Spinal cord layer 3 C3	contra	SCL3C3	2
Spinal cord layer 4 C3	contra	SCL4C3	2
Intermediate zone C3	contra	izVHC3	-0.5
Cervical segment 4	contra	CS4	2
Spinal cord layer 5 C4	contra	SCL5C4	2
Spinal cord layer 6 C4	contra	SCL6C4	2
Spinal cord layer 3 C4	contra	SCL3C4	2
Spinal cord layer 4 C4	contra	SCL4C4	2
Intermediate zone C4	contra	izVHC4	-0.5
Cervical segment 5	contra	CS5	2
Spinal cord layer 5 C5	contra	SCL5C5	2
Spinal cord layer 6 C5	contra	SCL6C5	2
Spinal cord layer 3 C5	contra	SCL3C5	2
Spinal cord layer 4 C5	contra	SCL4C5	2
Intermediate zone C5	contra	izVHC5	-0.5
Cervical segment 6	contra	CS6	1
Spinal cord layer 5 C6	contra	SCL5C6	2
Spinal cord layer 6 C6	contra	SCL6C6	2
Spinal cord layer 3 C6	contra	SCL3C6	2
Spinal cord layer 4 C6	contra	SCL4C6	2
Intermediate zone C6	contra	izVHC6	-0.5
Cervical segment 7	contra	CS7	2
Lateral spinal nucleus C7	contra	LSpC7	1.5
Spinal cord layer 5 C7	contra	SCL5C7	2
Spinal cord layer 6 C7	contra	SCL6C7	2
Spinal cord layer 3 C7	contra	SCL3C7	2
Spinal cord layer 4 C7	contra	SCL4C7	2
Spinal cord layer 1 C7	contra	SCL1C7	0.5
Spinal cord layer 2 C7	contra	SCL2C7	0.5
Intermediate zone C7	contra	izVHC7	-0.5
Spinal cord layer 7 C7	contra	SCL7C7	0.5
Cervical segment 8	contra	CS8	2
Spinal cord layer 5 C8	contra	SCL5C8	2
Spinal cord layer 6 C8	contra	SCL6C8	2
Spinal cord layer 3 C8	contra	SCL3C8	2
Spinal cord layer 4 C8	contra	SCL4C8	2
Intermediate zone C8	contra	izVHC8	-0.5
Thoracal segment 1	contra	T1	1
Spinal cord layer 5 T1	contra	SCL5T1	2
Spinal cord layer 6 T1	contra	SCL6T1	2
Spinal cord layer 3 T1	contra	SCL3T1	2
Spinal cord layer 4 T1	contra	SCL4T1	2
Intermediate zone T1	contra	izVHT1	-0.5
Thoracal segment 2	contra	T2	1
Spinal cord layer 5 T2	contra	SCL5T2	2
Spinal cord layer 6 T2	contra	SCL6T2	2
Spinal cord layer 3 T2	contra	SCL3T2	2
Spinal cord layer 4 T2	contra	SCL4T2	2
Intermediate zone T2	contra	izVHT2	-0.5
Thoracal segment 3	contra	T3	1
Spinal cord layer 5 T3	contra	SCL5T3	2
Spinal cord layer 6 T3	contra	SCL6T3	2
Spinal cord layer 3 T3	contra	SCL3T3	2
Spinal cord layer 4 T3	contra	SCL4T3	2
Intermediate zone T3	contra	izVHT3	-0.5
Thoracal segment 4	contra	T4	0.5
Spinal cord layer 5 T4	contra	SCL5T4	2
Spinal cord layer 6 T4	contra	SCL6T4	2
Spinal cord layer 3 T4	contra	SCL3T4	2
Spinal cord layer 4 T4	contra	SCL4T4	2
Intermediate zone T4	contra	izVHT4	-0.5
Thoracal segment 5	contra	T5	0.5
Spinal cord layer 5 T5	contra	SCL5T5	2
Spinal cord layer 6 T5	contra	SCL6T5	2
Spinal cord layer 3 T5	contra	SCL3T5	2
Spinal cord layer 4 T5	contra	SCL4T5	2
Intermediate zone T5	contra	izVHT5	-0.5
Thoracal segment 6	contra	T6	0.5
Spinal cord layer 5 T6	contra	SCL5T6	2
Spinal cord layer 6 T6	contra	SCL6T6	2
Spinal cord layer 3 T6	contra	SCL3T6	2
Spinal cord layer 4 T6	contra	SCL4T6	2
Intermediate zone T6	contra	izVHT6	-0.5
Thoracal segment 7	contra	T7	1
Spinal cord layer 5 T7	contra	SCL5T7	2
Spinal cord layer 6 T7	contra	SCL6T7	2
Spinal cord layer 3 T7	contra	SCL3T7	2
Spinal cord layer 4 T7	contra	SCL4T7	2
Intermediate zone T7	contra	izVHT7	-0.5
Thoracal segment 8	contra	T8	0.5
Spinal cord layer 5 T8	contra	SCL5T8	2
Spinal cord layer 6 T8	contra	SCL6T8	2
Spinal cord layer 3 T8	contra	SCL3T8	2
Spinal cord layer 4 T8	contra	SCL4T8	2
Intermediate zone T8	contra	izVHT8	-0.5
Thoracal segment 9	contra	T9	2
Spinal cord layer 5 T9	contra	SCL5T9	2
Spinal cord layer 6 T9	contra	SCL6T9	2
Spinal cord layer 3 T9	contra	SCL3T9	2
Spinal cord layer 4 T9	contra	SCL4T9	2
Intermediate zone T9	contra	izVHT9	-0.5
Thoracal segment 10	contra	T10	2
Spinal cord layer 5 T10	contra	SCL5T10	2
Spinal cord layer 6 T10	contra	SCL6T10	2
Spinal cord layer 3 T10	contra	SCL3T10	2
Spinal cord layer 4 T10	contra	SCL4T10	2
Intermediate zone T10	contra	izVHT10	-0.5
Thoracal segment 11	contra	T11	2
Spinal cord layer 5 T11	contra	SCL5T11	2
Spinal cord layer 6 T11	contra	SCL6T11	2
Spinal cord layer 3 T11	contra	SCL3T11	2
Spinal cord layer 4 T11	contra	SCL4T11	2
Intermediate zone T11	contra	izVHT11	-0.5
Thoracal segment 12	contra	T12	1
Spinal cord layer 5 T12	contra	SCL5T12	2
Spinal cord layer 6 T12	contra	SCL6T12	2
Spinal cord layer 3 T12	contra	SCL3T12	2
Spinal cord layer 4 T12	contra	SCL4T12	2
Intermediate zone T12	contra	izVHT12	-0.5
Thoracal segment 13	contra	T13	1
Spinal cord layer 5 T13	contra	SCL5T13	2
Spinal cord layer 6 T13	contra	SCL6T13	2
Spinal cord layer 3 T13	contra	SCL3T13	2
Spinal cord layer 4 T13	contra	SCL4T13	2
Intermediate zone T13	contra	izVHT13	-0.5
Lumbar segment 1	contra	L1	3
Spinal cord layer 5 L1	contra	SCL5L1	2
Spinal cord layer 6 L1	contra	SCL6L1	2
Spinal cord layer 3 L1	contra	SCL3L1	2
Spinal cord layer 4 L1	contra	SCL4L1	2
Lumbar segment 2	contra	L2	3
Spinal cord layer 5 L2	contra	SCL5L2	2
Spinal cord layer 6 L2	contra	SCL6L2	2
Spinal cord layer 3 L2	contra	SCL3L2	2
Spinal cord layer 4 L2	contra	SCL4L2	2
Lumbar segment 3	contra	L3	3
Spinal cord layer 5 L3	contra	SCL5L3	2
Spinal cord layer 6 L3	contra	SCL6L3	2
Spinal cord layer 3 L3	contra	SCL3L3	2
Spinal cord layer 4 L3	contra	SCL4L3	2
Intermediate zone L3	contra	izVHL3	-0.5
Spinal cord layer 7 L3	contra	SCL7L3	-0.5
Spinal cord layer 8 L3	contra	SCL8L3	-0.5
Lumbar segment 4	contra	L4	2
Spinal cord layer 5 L4	contra	SCL5L4	2
Spinal cord layer 6 L4	contra	SCL6L4	2
Spinal cord layer 3 L4	contra	SCL3L4	2
Spinal cord layer 4 L4	contra	SCL4L4	2
Intermediate zone L4	contra	izVHL4	-0.5
Spinal cord layer 7 L4	contra	SCL7L4	-0.5
Spinal cord layer 8 L4	contra	SCL8L4	-0.5
Lumbar segment 5	contra	L5	2
Spinal cord layer 5 L5	contra	SCL5L5	2
Spinal cord layer 6 L5	contra	SCL6L5	2
Spinal cord layer 3 L5	contra	SCL3L5	2
Spinal cord layer 4 L5	contra	SCL4L5	2
Intermediate zone L5	contra	izVHL5	-0.5
Spinal cord layer 7 L5	contra	SCL7L5	-0.5
Spinal cord layer 8 L5	contra	SCL8L5	-0.5
Lumbar segment 6	contra	L6	3
Spinal cord layer 5 L6	contra	SCL5L6	2
Spinal cord layer 6 L6	contra	SCL6L6	2
Spinal cord layer 3 L6	contra	SCL3L6	2
Spinal cord layer 4 L6	contra	SCL4L6	2
Intermediate zone L6	contra	izVHL6	-0.5
Spinal cord layer 7 L6	contra	SCL7L6	-0.5
Spinal cord layer 8 L6	contra	SCL8L6	-0.5
Sacral segment 1	contra	Sa1	3
Spinal cord layer 5 S1	contra	SCL5S1	2
Spinal cord layer 6 S1	contra	SCL6S1	2
Spinal cord layer 3 S1	contra	SCL3S1	2
Spinal cord layer 4 S1	contra	SCL4S1	2
Sacral segment 2	contra	Sa2	3
Spinal cord layer 5 S2	contra	SCL5S2	2
Spinal cord layer 6 S2	contra	SCL6S2	2
Spinal cord layer 3 S2	contra	SCL3S2	2
Spinal cord layer 4 S2	contra	SCL4S2	2
Sacral segment 3	contra	Sa3	1
Spinal cord layer 5 S3	contra	SCL5S3	2
Spinal cord layer 6 S3	contra	SCL6S3	2
Spinal cord layer 3 S3	contra	SCL3S3	2
Spinal cord layer 4 S3	contra	SCL4S3	2
Sacral segment 4	contra	Sa4	1
Spinal cord layer 5 S4	contra	SCL5S4	2
Spinal cord layer 6 S4	contra	SCL6S4	2
Spinal cord layer 3 S4	contra	SCL3S4	2
Spinal cord layer 4 S4	contra	SCL4S4	2
Coccygeal segment 1	contra	Co1	1
Coccygeal segment 2	contra	Co2	1
Coccygeal segment 3	contra	Co3	1
Lung	ipsi	OrgsLung	-10
Trachea side	ipsi	OrgsTras	2

Key for weights

Value	Weight
-3	unknown
-2	fibers of passage
-1	not clear
-0.5	exists
0	not present
0.5	very light
1	light / sparse
1.5	light / moderate
2	moderate / dense
2.5	moderate / strong
3	strong
4	very strong