University of Rostock

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Rat connectome



Gelatinosus thalamic nucleus left


Abbreviation
G
Color       
Superior regionsIntralaminar nuclei of the dorsal thalamus

SynonymsAbbr.Language
Gelatinosus thalamic nucleusGEng
Nucleus gelantinosus thalami Eng

SubregionsSide
Gelatinosus thalamic nucleus rostral partleft
Shell of the gelatinosus thalamic nucleusleft
Caudolateral part of the gelatinosus thalamic nucleusleft

Output to

NameSideAbbr.WeightDetails
Central grayipsiCG1
Parabrachial nucleusipsiPB1
Rostral ventral respiratory groupipsiRVRG0.5
Basal nucleus Meynert medial partipsiBmp2
Anterior group of the dorsal thalamusipsiATN-2
Reticular thalamic nucleusipsiRt-2
Reticular thalamic nucleus ventromedial partipsiRtvm3
Internal capsuleipsiic-2
Corpus callosumipsicc-0.5
Forceps minor of the corpus callosumipsifmi-2
Genu of the corpus callosumipsigcc-0.5
Rhinal fissureipsirf3
Dorsal bank of rhinal fissureipsiDBrf-0.5
Amygdaloid complexipsiAC1
Basal nucleusipsiBnc-1
Basal nucleus anterior subdivisionipsiBncA3
Globus pallidusipsiGP-0.5
Caudate putamenipsiCPu-0.5
Rostral striatumipsiCPur-0.5
Retrosplenial granular cortex caudal part layer 6 deep partipsiRSGc6d-0.5
Limbic regionsipsiLR0
Cingulate cortexipsiCg2
Cingulate cortex area 1 caudal partipsiCg1c0.5
Cingulate cortex area 2 caudal partipsiCg2c0.5
Cingulate cortex area 2 deep half of layer 6ipsiCg2dhL6-0.5
Prelimbic cortexipsiPrL0
Infralimbic cortexipsiIL1
Frontal association cortexipsiFrA4
Frontal cortex area 1ipsiFr12
Frontal cortex area 1 layer 1ipsiFr1L13
Frontal cortex area 1 layer 1 outer quarteripsiFr1L1oq-0.5
Frontal cortex area 2ipsiFr2-0.5
Frontal cortex area 2 anterior partipsiFr2a2
Temporal association area 3ipsiTe30
Auditory regionsipsiAU-0.5
Infragranular layers of the auditory cortexipsiAULi0
Perirhinal cortexipsiA353
Ectorhinal cortexipsiA363
Prefrontal cortexipsiPFC1
Motoric regionsipsiM4
Medial prefrontal cortexipsimPFC2
Medial agranular prefrontal cortexipsiAGm0
Sensory regionsipsiSR2
Primary visual cortexipsiV11
Medial orbital cortexipsiMO2
Ventral orbital cortexipsiVO2
Ventrolateral orbital areaipsiVLO2
Rostral ventral respiratory groupcontraRVRG0.5
Infragranular layers of the auditory cortexcontraAULi0

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG0
Dorsal tegmental nucleusipsiDTg2
Dorsal tegmental nucleus lateral partipsiDLTN2
Spinal trigeminal nucleus caudal partipsiSp5C-0.5
Spinal trigeminal nucleus caudal part layer 3ipsiSp5CaL3-0.5
Spinal trigeminal nucleus caudal part layer 1ipsiSp5CaL1-0.5
Spinal trigeminal nucleus caudal part layer 1 ventral partipsiSp5CaL1v0.5
Spinal trigeminal nucleus caudal part layer 1 dorsal partipsiSp5CaL1d-0.5
Spinal trigeminal nucleus caudal part layer 2ipsiSp5CaL2-0.5
Spinal trigeminal nucleus caudal part rostral partipsiSp5Cr-0.5
Spinal trigeminal nucleus caudal part ventral partipsiSp5CV0.5
Spinal trigeminal nucleus interpolar part caudalipsiSp5Ic-0.5
Lateral hypothalamic areaipsiLH1
Lateral hypothalamic area perifornical partipsiPFx1
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM1
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM1
Posterior hypothalamic areaipsiPHA1
Parafascicular thalamic nucleusipsiPF2
Rhomboid thalamic nucleusipsiRh1.5
Mediodorsal thalamic nucleusipsiMD2
Ventral posteromedial thalamic nucleusipsiVPM2
Dentate gyrusipsiDG1.5
Subiculum dorsal distal partipsiSdd1
Subiculum dorsal proximal partipsiSdp-0.5
Cerebral cortex layer 1ipsiCCL10
Prelimbic cortexipsiPrL-0.5
Infralimbic cortexipsiIL1.5
Infralimbic cortex deep layersipsiILDL2
Frontal cortex area 2ipsiFr2-0.5
Perirhinal cortexipsiA35-0.5
Dorsal peduncular cortexipsiDP2
Lateral agranular prefrontal cortexipsiAGl1
Lateral agranular prefrontal cortex layer 5ipsiAGlL53
Lateral agranular prefrontal cortex layer 6ipsiAGlL63
Medial prefrontal cortexipsimPFC0.5
Medial agranular prefrontal cortex rostral partipsirAGm2
Interpeduncular nucleus lateral subnucleusipsiIPL1
Central graycontraCG0
Dorsal tegmental nucleuscontraDTg1
Dorsal tegmental nucleus lateral partcontraDLTN1
Spinal trigeminal nucleus caudal partcontraSp5C-0.5
Spinal trigeminal nucleus caudal part layer 3contraSp5CaL3-0.5
Spinal trigeminal nucleus caudal part layer 1contraSp5CaL1-0.5
Spinal trigeminal nucleus caudal part layer 1 ventral partcontraSp5CaL1v1
Spinal trigeminal nucleus caudal part layer 1 dorsal partcontraSp5CaL1d-0.5
Spinal trigeminal nucleus caudal part layer 2contraSp5CaL21
Spinal trigeminal nucleus caudal part rostral partcontraSp5Cr-0.5
Spinal trigeminal nucleus caudal part ventral partcontraSp5CV1
Spinal trigeminal nucleus interpolar part caudalcontraSp5Ic-0.5
Dentate gyruscontraDG0
Medial agranular prefrontal cortex rostral partcontrarAGm2
Interpeduncular nucleus lateral subnucleuscontraIPL2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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