University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Rostral thalamus left


Abbreviation
RoT
Color       
Superior regionsThalamus

SynonymsAbbr.Language
Rostral thalamusRoTEng
Rostral thalamic nucleus Eng

Output to

NameSideAbbr.WeightDetails
Ventrolateral thalamic nucleusipsiVL1
Lateral habenular nucleus lateral partipsiLHbL3
Temporal association area 2 dorsal partipsiTe2D-0.5
Primary visual cortex layer 1ipsiV1L13
Secondary visual cortex medial area layer 1ipsiV2ML13
Secondary visual cortex lateral area layer 1ipsiV2LL13

Input from

NameSideAbbr.WeightDetails
Inferior colliculusipsiICOL-0.5
Substantia nigra A9ipsiSN2
Globus pallidusipsiGP-0.5
Ventral pallidumipsiVP4
Ventral pallidum caudal partipsiVPc4
Ventral pallidum lateral partipsiVPlp4
Field CA1 of hippocampus ventral poleipsiCA1vp1
Retrosplenial granular a cortex layer 6ipsiRSGa6-0.5
Retrosplenial granular a cortex middle part layer 2ipsiRSGaMiL2-0.5
Retrosplenial granular a cortex middle part layer 3ipsiRSGaMiL3-0.5
Retrosplenial granular a cortex middle part layer 4ipsiRSGaMiL4-0.5
Retrosplenial granular a cortex middle part layer 5ipsiRSGaMiL5-0.5
Retrosplenial granular a cortex middle part layer 6ipsiRSGaMiL6-0.5
Retrosplenial granular cortex b region rostrocaudal middle layersipsiRSGbrcmL-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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