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Rat connectome
Globus pallidus left
Abbreviation
GP
Color
Superior regions
Pallidum
Synonyms
Abbr.
Language
Pallidum
Eng
Globus pallidus
GP
Eng
Pallidal complex
Eng
Subregions
Side
Anteromedial globus pallidus
left
Anteroventral globus pallidus
left
Caudal globus pallidus
left
Caudolateral globus pallidus
left
Dorsal globus pallidus
left
Globus pallidus anterior portion
left
Globus pallidus dorsolateral part
left
Globus pallidus mediodorsal part
left
Globus pallidus rostrolateral part
left
Lateral globus pallidus
left
Medial globus pallidus
left
Middle part of globus pallidus
left
Peripallidal region
left
Rostral globus pallidus
left
Subpallidal region
left
Ventral pallidum
left
Subventral pallidal lamina
left
Globus pallidus most ventral part
left
Cell populations of the globus pallidus
left
Base of globus pallidus
left
Edge of the globus pallidus
left
Globus pallidus central part
left
Peripallidal area
left
Globus pallidus principal cell
left
Dorsomedial globus pallidus
left
Globus pallidus posterior part
left
Globus pallidus rostrocaudal middle
left
Globus pallidus outer neurons
left
Globus pallidus inner neruons
left
Globus pallidus medial edge
left
Output to
Name
Side
Abbr.
Weight
Details
Ventrolateral periaqueductal gray
ipsi
VLPAG
2
Inferior colliculus
ipsi
ICOL
3
Superior colliculus
ipsi
SC
0
Tegmental area
ipsi
TGA
3
Midbrain extrapyramidal area
ipsi
MEA
0.5
Peduncularpontine nucleus
ipsi
PPN
3
Substantia nigra A9
ipsi
SN
3
Substantia nigra A9 dorsal part
ipsi
SND
-0.5
Substantia nigra caudal part
ipsi
SNcp
-0.5
Lateral part of the caudal extent of the substantia nigra
ipsi
SNLcp
-0.5
Intermediate part of the caudal substantia nigra
ipsi
SNimcp
-0.5
Substantia nigra compact part
ipsi
SNC
3
Substantia nigra compact part caudal tier
ipsi
SNCC
4
Substantia nigra compact part dorsal tier
ipsi
SNCD
2
Substantia nigra lateral part
ipsi
SNL
3
Substantia nigra medial part
ipsi
SNM
2
Substantia nigra reticular part
ipsi
SNR
3
Substantia nigra reticular part medial tier
ipsi
SNRm
2
Substantia nigra rostral part
ipsi
SNrp
-0.5
Substantia nigra ventral part
ipsi
SNv
1
Ventral tegmental area A10
ipsi
VTA
2
Middle part of the retrorubral field
ipsi
RRmi
0
Pedunculopontine tegmental nucleus
ipsi
PPTg
1
Pedunculopontine tegmental nucleus pars compacta
ipsi
PPNC
2
Cerebellar lobule 7
ipsi
CERL7
-10
Superior cerebellar peduncle
ipsi
sucep
3
Reticular system
ipsi
RF
0.5
Deep mesencephalic nucleus
ipsi
DpMe
0
Peribrachial region
ipsi
PBR
2
Cuneiforme nucleus
ipsi
CnF
3
Parabrachial nucleus
ipsi
PB
3
Lateral reticular nucleus
ipsi
LRt
2
Lateral reticular nucleus parvicellular part
ipsi
LRtPC
3
Medullary reticular nucleus dorsal part
ipsi
MdDd
2.5
Myelencephalon
ipsi
MYC
2
Nucleus of the solitary tract
ipsi
Sol
1
Dorsal motor nucleus of vagus
ipsi
10
1
Dorsal raphe nucleus
ipsi
DR
1.5
Linear nucleus of the raphe
ipsi
LIR
1
Median raphe nucleus
ipsi
MnR
0
Dorsomedial medullary region oblongata
ipsi
MeObdm
1
Inferior olive
ipsi
IO
0
Inferior olive dorsal nucleus
ipsi
IOD
0
Inferior olive principal nucleus
ipsi
IOPr
0
Retrotrapezoid nucleus
ipsi
RTN
0
Basal forebrain
ipsi
BAF
-0.5
Lateral preoptic area
ipsi
LPO
2
Medial preoptic area
ipsi
MPA
2
Medial preoptic nucleus
ipsi
MPO
2
Posterior region [Lateral division of the hypothalamus]
ipsi
PReg
1
Lateral hypothalamic area
ipsi
LH
2
Lateral hypothalamic area anterior part
ipsi
LHAa
2
Lateral hypothalamic area posterior part
ipsi
LHAp
2
Tuberal region of lateral hypothalamus
ipsi
TuLH
1
Medial zone
ipsi
MHA
0
Anterior hypothalamic area
ipsi
AHA
0
Area periventricularis hypothalamica communis [Regio hypothalamus caudalis]
ipsi
PeRHC
0
Dorsal hypothalamic area
ipsi
DA
2
Ventromedial hypothalamic nucleus
ipsi
VMH
0
Arcuate nucleus
ipsi
Arc
0
Paraventricular nucleus of the hypothalamus magnocellular division anterior magnocellular part
ipsi
PaAMa
0
Paraventricular hypothalamic nucleus parvicellular division dorsal part
ipsi
PaPcD
0.5
Paraventricular hypothalamic nucleus lateral parvocellular part
ipsi
LPPa
0.5
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]
ipsi
PaAP
0.5
Posterior magnocellular subdivision of the paraventricular hypothalamic nucleus
ipsi
PaPoM
0
Paraventricular nucleus medial parvocellular part
ipsi
PaMep
0.5
Suprachiasmatic nucleus
ipsi
SCh
0
Supraoptic nucleus [Supraoptic region]
ipsi
SO
2
Premammillary nucleus ventral part
ipsi
PMV
1
A8 dopamine cells retrorubral group
ipsi
RRF
1.5
A8 dopamine cells retrorubral group lateral part
ipsi
RRFL
3
A8 dopamine cells retrorubral group medial part
ipsi
RRFm
1
Perifornical nucleus
ipsi
PeF
0.5
Retrochiasmatic area
ipsi
RCh
0
Thalamus
ipsi
T
3
Anteromedial thalamic nucleus
ipsi
AM
2
Anteroventral thalamic nucleus
ipsi
AV
3
Interoanteromedial thalamic nucleus
ipsi
IAM
2
Central medial thalamic nucleus
ipsi
CM
2
Centrolateral thalamic nucleus
ipsi
CL
2
Paracentral thalamic nucleus
ipsi
PC
2.5
Parafascicular thalamic nucleus
ipsi
PF
2
Rhomboid thalamic nucleus
ipsi
Rh
1.5
Posterior thalamic nuclear group dorsocaudal part
ipsi
PoDC
1
Suprageniculate thalamic nucleus
ipsi
SG
-0.5
Medial group of the dorsal thalamus
ipsi
MED
1
Mediodorsal thalamic nucleus
ipsi
MD
2
Mediodorsal thalamic nucleus central part
ipsi
MDC
2
Mediodorsal thalamic nucleus lateral part
ipsi
MDL
-10
Mediodorsal thalamic nucleus medial part
ipsi
MDM
2
Submedius thalamic nucleus
ipsi
Sub
2
Paraventricular thalamic nucleus
ipsi
PV
2
Paraventricular thalamic nucleus rostral part
ipsi
PVr
1
Reuniens thalamic nucleus
ipsi
Re
2
Ventral anterior-lateral complex of the thalamus
ipsi
VAL
1
Ventro anterior thalamic nucleus
ipsi
VA
-0.5
Ventrolateral thalamic nucleus
ipsi
VL
3
Ventral posterolateral thalamic nucleus anterior part
ipsi
VPLA
2
Ventral posterolateral thalamic nucleus posterior part
ipsi
VPLP
1
Medial part of ventral posteromedial thalamic nucleus
ipsi
VPMm
1
Ventral posteromedial thalamic nucleus anterior part
ipsi
VPMA
2
Ventromedial thalamic nucleus
ipsi
VM
2
Posterior intralaminar thalamic nucleus
ipsi
PIL
-0.5
Parafascicular centre-median complex
ipsi
PFCM
1
Rostral thalamus
ipsi
RoT
-0.5
Ventral thalamus
ipsi
VNT
0.5
Reticular thalamic nucleus
ipsi
Rt
2
Reticular thalamic nucleus caudal part
ipsi
Rtc
-10
Reticular thalamic nucleus intermediate part
ipsi
Rti
2
Reticular thalamic nucleus lateral part
ipsi
RtL
1
Reticular thalamic nucleus medial part
ipsi
Rtm
2
Reticular thalamic nucleus rostral medial part
ipsi
Rtrm
3
Reticular thalamic nucleus rostral part
ipsi
Rtr
2
Dorsal part of reticular thalamic nucleus rostral part
ipsi
RtrD
-10
Ventral part of reticular thalamic nucleus rostral part
ipsi
RtrVe
-10
Subparafascicular thalamic nucleus
ipsi
SPF
-0.5
Zona incerta
ipsi
ZI
2
Zona incerta ventral part
ipsi
ZIV
2
Tuber cinereum area
ipsi
TC
0.5
Habenula
ipsi
HAB
1
Lateral habenular nucleus
ipsi
LHb
2
Lateral habenular nucleus lateral part
ipsi
LHbL
2
Lateral habenular nucleus medial part
ipsi
LHbM
1
Lateral habenular nucleus caudal subfield
ipsi
LHbcs
2
Internal capsule
ipsi
ic
-0.5
Medial forebrain bundle
ipsi
mfb
2
Amygdaloid complex
ipsi
AC
1
Basal nucleus
ipsi
Bnc
2
Basolateral amygdaloid nucleus
ipsi
BL
2
Lateral amygdaloid nucleus
ipsi
LA
2
Bed nucleus of the stria terminalis lateral division
ipsi
BSTL
1
Bed nucleus of the stria terminalis medial division
ipsi
BSTM
0
Central amygdaloid nucleus
ipsi
Ce
2.5
Anterior two-thirds of the central amygdaloid nucleus
ipsi
CeAntt
3
Central amygdaloid nucleus lateral division
ipsi
CeL
-1
Globus pallidus
ipsi
GP
-0.5
Lateral globus pallidus
ipsi
LGP
2
Medial globus pallidus
ipsi
MGP
3
Medial globus pallidus dorsal part
ipsi
MGPd
2
Medial globus pallidus lateral part
ipsi
MGPl
2
Ventral pallidum
ipsi
VP
-2
Ventral pallidum lateral part
ipsi
VPlp
2
Striatum
ipsi
STR
4
Accumbens nucleus
ipsi
Ac
3
Accumbens nucleus posterolateral part
ipsi
Acbpl
1
Accumbens nucleus shell
ipsi
AcbSh
-0.5
Lateral nucleus accumbens
ipsi
Acl
1
Caudate putamen
ipsi
CPu
3
Caudal striatum
ipsi
CPuc
1
Dorsal striatum
ipsi
CPud
3
Dorsolateral striatum
ipsi
CPudl
-0.5
Dorsolateral striatum dorsal part
ipsi
CPudlD
-0.5
Rostral striatum
ipsi
CPur
-0.5
Striatum rostrodorsal part
ipsi
STRrd
2
Ventral striatum
ipsi
CPuv
-0.5
Ventrolateral striatum
ipsi
CPuvl
-0.5
Lateral striatum
ipsi
CPul
-0.5
Subthalamic nucleus
ipsi
STh
4
Subthalamic nucleus central part
ipsi
SThCe
2
Subthalamic nucleus lateral part
ipsi
SThl
3
Subthalamic nucleus medial part
ipsi
SThM
-0.5
Subthalamic nucleus mediolateral part
ipsi
SThML
-0.5
Subthalamic nucleus middle part
ipsi
SThm
2
Ventral position in the medial part of the subthalamic nucleus
ipsi
SThMV
-0.5
Cerebral cortex
ipsi
CEC
-0.5
Hippocampus
ipsi
HIPP
0.5
Lateral entorhinal cortex
ipsi
LEnt
0.5
Medial entorhinal cortex
ipsi
MEnt
0.5
Retrosplenial agranular cortex
ipsi
RSA
-1
Cingulate cortex
ipsi
Cg
2
Cingulate cortex area 3
ipsi
Cg3
-0.5
Infralimbic cortex
ipsi
IL
-0.5
Neocortex
ipsi
NEOCX
3
Frontal association cortex
ipsi
FrA
3
Temporoparietal cortex
ipsi
TPcx
-0.5
Parietal association cortex
ipsi
PtA
3
Temporal cortex
ipsi
TE
2
Temporal association cortex 1
ipsi
TeA
1
Primary auditory cortex
ipsi
Au1
-0.5
Agranular insular cortex dorsal part deep layers
ipsi
AIDdL
-0.5
Agranular insular cortex dorsal part superficial layers
ipsi
AIDsL
-0.5
Dysgranular insular cortex
ipsi
DI
-0.5
Granular insular cortex
ipsi
GI
2
Perirhinal cortex
ipsi
A35
3
Ectorhinal cortex
ipsi
A36
1
Postrhinal cortex
ipsi
POR
0.5
Prefrontal cortex
ipsi
PFC
1
Somatomotoric regions
ipsi
SMR
2
Lateral prefrontal cortex
ipsi
lPFC
-0.5
Lateral agranular prefrontal cortex
ipsi
AGl
2
Medial prefrontal cortex
ipsi
mPFC
2
Medial agranular prefrontal cortex
ipsi
AGm
2
Sensory regions
ipsi
SR
2
Somatosensory cortex layer 5
ipsi
SRL5
2
Visual regions
ipsi
VR
2
Primary visual cortex layer 5
ipsi
V1L5
2
Primary visual cortex layer 6
ipsi
V1L6
2
Secondary visual cortex medial area layer 5
ipsi
V2ML5
2
Secondary visual cortex medial area layer 6
ipsi
V2ML6
2
Secondary visual cortex lateral area layer 5
ipsi
V2LL5
2
Secondary visual cortex lateral area layer 6
ipsi
V2LL6
2
Anterior medial frontal cortex
ipsi
AMFC
-0.5
Lateral orbital cortex
ipsi
LO
1
Medial orbital cortex
ipsi
MO
-0.5
Ventral orbital cortex
ipsi
VO
1
Ventrolateral orbital area posterior part
ipsi
VLOp
-0.5
Neocortex layer 4
ipsi
NEOCXL4
-0.5
Neocortex layer 3
ipsi
NEOCXL3
-0.5
Neocortex layers 5-6
ipsi
NEOCXL56
-0.5
Neocortex layer 5
ipsi
NEOCXL5
-0.5
Anterior commissure
ipsi
ac
-2
Lateral geniculate complex
ipsi
LG
0
Medial geniculate nucleus medial part
ipsi
MGM
-0.5
Lateral septal nucleus intermediate part
ipsi
LSI
2
Midbrain extrapyramidal area
contra
MEA
0
Substantia nigra compact part
contra
SNC
0
Substantia nigra reticular part
contra
SNR
0
Ventral tegmental area A10
contra
VTA
0
Pedunculopontine tegmental nucleus
contra
PPTg
0
Parabrachial nucleus
contra
PB
0
Dorsal raphe nucleus
contra
DR
0
Linear nucleus of the raphe
contra
LIR
0
Inferior olive
contra
IO
0
Inferior olive dorsal nucleus
contra
IOD
0
Inferior olive principal nucleus
contra
IOPr
0
Retrotrapezoid nucleus
contra
RTN
0
Lateral preoptic area
contra
LPO
0
Medial preoptic area
contra
MPA
0
Medial preoptic nucleus
contra
MPO
0
Lateral hypothalamic area
contra
LH
0
Dorsal hypothalamic area
contra
DA
0
Supraoptic nucleus [Supraoptic region]
contra
SO
0
Premammillary nucleus ventral part
contra
PMV
0
A8 dopamine cells retrorubral group
contra
RRF
0
Anteromedial thalamic nucleus
contra
AM
0
Anteroventral thalamic nucleus
contra
AV
0
Interoanteromedial thalamic nucleus
contra
IAM
0
Central medial thalamic nucleus
contra
CM
0
Centrolateral thalamic nucleus
contra
CL
0
Paracentral thalamic nucleus
contra
PC
0
Parafascicular thalamic nucleus
contra
PF
0
Rhomboid thalamic nucleus
contra
Rh
1
Mediodorsal thalamic nucleus central part
contra
MDC
1
Mediodorsal thalamic nucleus medial part
contra
MDM
1
Submedius thalamic nucleus
contra
Sub
0
Paraventricular thalamic nucleus
contra
PV
0.5
Paraventricular thalamic nucleus rostral part
contra
PVr
0
Reuniens thalamic nucleus
contra
Re
0.5
Ventrolateral thalamic nucleus
contra
VL
0
Ventral posterolateral thalamic nucleus anterior part
contra
VPLA
1
Ventral posteromedial thalamic nucleus anterior part
contra
VPMA
1
Ventromedial thalamic nucleus
contra
VM
0
Parafascicular centre-median complex
contra
PFCM
0.5
Zona incerta ventral part
contra
ZIV
0
Lateral habenular nucleus
contra
LHb
0.5
Lateral habenular nucleus lateral part
contra
LHbL
0.5
Lateral habenular nucleus caudal subfield
contra
LHbcs
0.5
Medial forebrain bundle
contra
mfb
0
Basolateral amygdaloid nucleus
contra
BL
0
Central amygdaloid nucleus
contra
Ce
3
Striatum
contra
STR
3
Caudate putamen
contra
CPu
1
Subthalamic nucleus
contra
STh
1
Cingulate cortex
contra
Cg
0
Neocortex
contra
NEOCX
3
Perirhinal cortex
contra
A35
0
Medial agranular prefrontal cortex
contra
AGm
1
Lateral septal nucleus intermediate part
contra
LSI
0
Bulbospongiosus muscle
ipsi
Muscbsp
1
Bulbospongiosus muscle
contra
Muscbsp
1
Input from
Name
Side
Abbr.
Weight
Details
Periaqueductal gray
ipsi
PAG
2
Periventricular gray matter
ipsi
PVG
1
Superior colliculus
ipsi
SC
4
Tegmental area
ipsi
TGA
-0.5
Peduncularpontine nucleus
ipsi
PPN
3
Substantia nigra A9
ipsi
SN
3
Substantia nigra compact part
ipsi
SNC
4
Substantia nigra compact part dorsal tier
ipsi
SNCD
2
Substantia nigra compact part medial tier
ipsi
SNCM
1
Substantia nigra compact part ventral tier
ipsi
SNCV
2
Substantia nigra lateral part
ipsi
SNL
2
Substantia nigra reticular part
ipsi
SNR
3
Ventral tegmental area A10
ipsi
VTA
4
Interfascicular nucleus
ipsi
IF
0.5
Parabrachial pigmented nucleus
ipsi
PBP
3
Paranigral nucleus
ipsi
PN
0
Caudal linear nucleus of the raphe
ipsi
CLi
0.5
Peripeduncular area
ipsi
PPA
3
Peripeduncular nucleus
ipsi
PP
2
Retrorubral nucleus
ipsi
RR
2
Laterodorsal tegmental nucleus
ipsi
LDTg
3
Dorsal tegmental nucleus lateral part
ipsi
DLTN
1
Pedunculopontine tegmental nucleus
ipsi
PPTg
3
Pedunculopontine tegmental nucleus pars compacta
ipsi
PPNC
2
Pedunculopontine tegmental nucleus pars dissipata
ipsi
PPNd
3
Locus coeruleus
ipsi
LC
2
Prepositus nucleus
ipsi
Pr
-3
Reticular system
ipsi
RF
-0.5
Mesencephalic reticular formation
ipsi
MRF
2
Pontine reticular nucleus
ipsi
PRN
1
Pontine reticular nucleus oral part
ipsi
PnO
-0.5
Pontine reticular nucleus caudal part
ipsi
PNC
-0.5
Peribrachial region
ipsi
PBR
1
Parabrachial nucleus
ipsi
PB
1
Central medial parabrachial nucleus waist
ipsi
CMPBw
2
Koelliker Fuse nucleus
ipsi
KF
1
Lateral parabrachial nucleus
ipsi
LPB
2
Lateral parabrachial nucleus ventral part
ipsi
LPBV
2
Parabrachial nucleus medial
ipsi
PBnMe
2
Gigantocellular reticular nucleus
ipsi
Gi
-0.5
Paratrigeminal nucleus
ipsi
Pa5
-0.5
Nucleus of the solitary tract
ipsi
Sol
-0.5
Raphe nuclei
ipsi
RAN
-0.5
Dorsal raphe nucleus
ipsi
DR
4
Dorsal raphe nucleus caudal part
ipsi
DRC
2
Dorsal raphe nucleus caudal part non serotoninergic population
ipsi
DRCnsp
0.5
Dorsal raphe nucleus dorsal part non serotoninergic population
ipsi
DRDnsp
0.5
Dorsal raphe nucleus interfascicular part non serotoninergic population
ipsi
DRInsp
0.5
Dorsal raphe nucleus lateral wing non serotoninergic population
ipsi
DRIwnsp
0.5
Dorsal raphe nucleus midrostrocaudal part non serotoninergic population
ipsi
DRmrcnsp
0.5
Dorsal raphe nucleus rostral part
ipsi
DRr
2.5
Dorsal raphe nucleus rostral part non serotoninergic population
ipsi
DRrnsp
0.5
Midrostrocaudal levels through the dorsal raphe nucleus
ipsi
DRmirc
3
Dorsal raphe nucleus ventral part non serotoninergic population
ipsi
DRVnsp
0.5
Dorsal raphe nucleus ventrolateral part non serotoninergic population
ipsi
DRVLnsp
0.5
Rostral linear nucleus of the raphe
ipsi
RLi
1
Median raphe nucleus
ipsi
MnR
2
Superior central raphe nucleus
ipsi
CS
2
Raphe magnus nucleus
ipsi
RMg
0
Ventral lateral medulla oblongata
ipsi
MVL
-3
Basal nucleus Meynert
ipsi
B
-0.5
Substantia innominata
ipsi
SI
1
Tuberomammillary nucleus
ipsi
TuM
2
Lateral zone
ipsi
LHA
1
Lateral hypothalamic area
ipsi
LH
1
Lateral hypothalamic area lateral part
ipsi
LHAL
1
Lateral hypothalamic area perifornical part
ipsi
PFx
1
Dorsomedial hypothalamic nucleus [Medial zone]
ipsi
DM
1
Dorsomedial hypothalamic nucleus dorsomedial part
ipsi
DMDM
1
Posterior hypothalamic area
ipsi
PHA
1
Posterior hypothalamic nucleus caudal part
ipsi
PHCa
0
Posterior hypothalamic nucleus rostral part
ipsi
PHRo
1
Periventricular zone
ipsi
PVZ
0.5
Arcuate nucleus
ipsi
Arc
0.5
Supramammillar nucleus lateral part lateral subpart
ipsi
SuMLL
0
Supramammillar nucleus lateral part medial subpart
ipsi
SuMLM
0
Supramammillar nucleus medial part
ipsi
SuMM
0
A8 dopamine cells retrorubral group
ipsi
RRF
4
Thalamus
ipsi
T
0.5
Anterior group of the dorsal thalamus
ipsi
ATN
0
Anteromedial thalamic nucleus
ipsi
AM
0
Intralaminar nuclei of the dorsal thalamus
ipsi
ILM
1
Central medial thalamic nucleus
ipsi
CM
3
Centrolateral thalamic nucleus
ipsi
CL
3
Gelatinosus thalamic nucleus
ipsi
G
-0.5
Paracentral thalamic nucleus
ipsi
PC
3
Parafascicular thalamic nucleus
ipsi
PF
3
Parafascicular thalamic nucleus lateral part
ipsi
PFL
2
Posterior thalamic nuclear group
ipsi
Po
1
Suprageniculate thalamic nucleus
ipsi
SG
2
Mediodorsal thalamic nucleus
ipsi
MD
1
Intermediodorsal thalamic nucleus
ipsi
IMD
3
Paratenial thalamic nucleus
ipsi
PT
0
Paraventricular thalamic nucleus anterior part
ipsi
PVA
1
Paraventricular thalamic nucleus posterior part
ipsi
PVP
1
Perireuniens nucleus
ipsi
PRe
1
Reuniens thalamic nucleus
ipsi
Re
3
Ventral anterior-lateral complex of the thalamus
ipsi
VAL
0
Ventral anterior-lateral complex of the thalamus dorsolateral part
ipsi
VALDL
0
Ventrolateral thalamic nucleus
ipsi
VL
1
Ventrobasal complex
ipsi
VB
1
Ventral posteromedial thalamic nucleus parvicellular part
ipsi
VPMpc
-1
Ventromedial thalamic nucleus
ipsi
VM
1
Ventromedial thalamic nucleus caudal two thirds
ipsi
VMctt
-0.5
Ventromedial thalamic nucleus lateral part
ipsi
VML
-2
Ethmoid thalamic nucleus
ipsi
Eth
1
Posterior intralaminar thalamic nucleus
ipsi
PIL
2
Lateral posterior thalamic nucleus
ipsi
LP
-0.5
Lateral posterior thalamic nucleus posterior part dorsomedial area
ipsi
LPPdm
-0.5
Reticular thalamic nucleus
ipsi
Rt
2
Reticular thalamic nucleus rostrocaudal part
ipsi
Rtrc
1.5
Subparafascicular thalamic nucleus
ipsi
SPF
2
Subparafascicular thalamic nucleus rostral part
ipsi
SPFr
1
Zona incerta
ipsi
ZI
3
Zona incerta lateral part
ipsi
ZIL
2
Zona incerta medial part
ipsi
ZIm
0.5
Habenula
ipsi
HAB
0
Lateral habenular nucleus
ipsi
LHb
-0.5
Pretectal region
ipsi
PRT
0
Internal capsule
ipsi
ic
-2
Basal nucleus
ipsi
Bnc
2
Basolateral amygdaloid nucleus
ipsi
BL
0
Basolateral nucleus rostral part
ipsi
BLRP
-1
Bed nucleus of the stria terminalis lateral division dorsal part
ipsi
BSTLD
2
Central amygdaloid nucleus
ipsi
Ce
2
Nucleus of the lateral olfactory tract
ipsi
LOT
1
Corpus striatum
ipsi
CSTR
0.5
Globus pallidus
ipsi
GP
-0.5
Globus pallidus rostrolateral part
ipsi
GPrL
2
Medial globus pallidus
ipsi
MGP
3
Medial globus pallidus caudal part
ipsi
MGPc
1
Caudal part of medial globus pallidus rostral part
ipsi
MGPrc
2
Ventral pallidum
ipsi
VP
2.5
Globus pallidus outer neurons
ipsi
GPon
-0.5
Globus pallidus inner neruons
ipsi
GPin
-0.5
Striatum
ipsi
STR
3
Accumbens nucleus
ipsi
Ac
1.5
Dorsal core
ipsi
AcbCd
3
Dorsomedial core
ipsi
AcbCdm
1
Lateral core
ipsi
AcbCl
3
Ventral core
ipsi
AcbCv
3
Dorsomedial shell
ipsi
AcbShdm
1
Ventromedial shell
ipsi
AcbShvm
1
Caudate putamen
ipsi
CPu
3
Anterior core region of the caudate putamen
ipsi
AcCPu
-0.5
Dorsomedial striatum
ipsi
CPudm
2
Medial striatum
ipsi
CPum
2
Dorsal striatum
ipsi
CPud
2
Dorsal striatum central part
ipsi
CPudc
-0.5
Dorsocentral striatum
ipsi
DCS
3
Dorsolateral striatum
ipsi
CPudl
3
Mediodorsal striatum
ipsi
CPuMD
3
Posterior caudate putamen
ipsi
CPup
2
Posterior caudate putamen ventral part
ipsi
CPupv
2
Rostrocaudal striatum
ipsi
CPurc
3
Rostroventral striatum
ipsi
CPurv
2
Striatal matrix compartment
ipsi
SMC
-0.5
Striatal patch compartment
ipsi
SPC
-0.5
Ventral striatum
ipsi
CPuv
2
Ventrolateral striatum
ipsi
CPuvl
1
Ventromedial striatum
ipsi
CPuvm
3
Jaw region of the striatum
ipsi
CPuJaw
3
Marginal zone of the striatum
ipsi
CPuMZ
-0.5
Medium spiny cells of the caudate putamen
ipsi
CPums
-0.5
Caudate putamen tail
ipsi
CPuT
-0.5
Lateral part of the middle caudate putamen
ipsi
CPuMiL
-0.5
Middle caudate putamen dorsoventrally
ipsi
CPuMidv
-0.5
Subthalamic nucleus
ipsi
STh
4
Parasubthalamic nucleus
ipsi
PSTh
1.5
Subthalamic nucleus caudomedial part
ipsi
SThCM
-0.5
Subthalamic nucleus medial part
ipsi
SThM
1.5
Subthalamic nucleus middle part
ipsi
SThm
1
Subthalamic nucleus medial cap
ipsi
SThMc
4
Cerebral cortex
ipsi
CEC
0.5
Cingulate cortex area 3 layer 5
ipsi
Cg3L5
1
Prelimbic cortex
ipsi
PrL
2
Prelimbic cortex dorsal part layer 5
ipsi
PrLdL5
-0.5
Frontal association cortex layer 5
ipsi
FrALL5
3
Frontal cortex area 2
ipsi
Fr2
2
Parietal association cortex
ipsi
PtA
2
Insular cortex
ipsi
ICX
2
Agranular insular cortex dorsal part
ipsi
AID
1
Agranular insular cortex posterior part
ipsi
AIP
-0.5
Prefrontal cortex
ipsi
PFC
2
Lateral agranular prefrontal cortex
ipsi
AGl
2
Rostral part of lateral agranular prefrontal cortex layer 5
ipsi
AGlrL5
-2
Medial agranular prefrontal cortex rostral part layer 5
ipsi
rAGmL5
-2
Primary somatosensory cortex
ipsi
S1
0.5
Visual regions
ipsi
VR
2
Orbital cortex
ipsi
OrC
2
Lateral orbital cortex
ipsi
LO
2
Medial geniculate nucleus dorsal part
ipsi
MGD
2
Medial geniculate nucleus medial part
ipsi
MGM
3
Medial geniculate nucleus posterior part
ipsi
MGp
-0.5
Medial geniculate nucleus ventral part
ipsi
MGV
2
Interpeduncular nucleus
ipsi
IP
1
Spinal cord
ipsi
MES
-0.5
Lateral spinal nucleus C1
ipsi
LSpC1
-0.5
Spinal cord layers C1
ipsi
SCLC1
2
Area X C1
ipsi
SCL10C1
-0.5
Spinal cord layer 5 C1
ipsi
SCL5C1
-0.5
Lateral spinal nucleus C2
ipsi
LSpC2
-0.5
Spinal cord layers C2
ipsi
SCLC2
2
Area X C2
ipsi
SCL10C2
-0.5
Spinal cord layer 5 C2
ipsi
SCL5C2
-0.5
Lateral spinal nucleus C3
ipsi
LSpC3
-0.5
Spinal cord layers C3
ipsi
SCLC3
1
Area X C3
ipsi
SCL10C3
-0.5
Spinal cord layer 5 C3
ipsi
SCL5C3
-0.5
Lateral spinal nucleus C4
ipsi
LSpC4
-0.5
Spinal cord layers C4
ipsi
SCLC4
1
Area X C4
ipsi
SCL10C4
-0.5
Spinal cord layer 5 C4
ipsi
SCL5C4
-0.5
Lateral spinal nucleus C5
ipsi
LSpC5
-0.5
Spinal cord layers C5
ipsi
SCLC5
1
Area X C5
ipsi
SCL10C5
-0.5
Spinal cord layer 5 C5
ipsi
SCL5C5
-0.5
Cervical segment 6
ipsi
CS6
-0.5
Lateral spinal nucleus C6
ipsi
LSpC6
-0.5
Spinal cord layers C6
ipsi
SCLC6
1
Area X C6
ipsi
SCL10C6
-0.5
Spinal cord layer 5 C6
ipsi
SCL5C6
-0.5
Cervical segment 7
ipsi
CS7
-0.5
Lateral spinal nucleus C7
ipsi
LSpC7
0.5
Spinal cord layers C7
ipsi
SCLC7
1
Area X C7
ipsi
SCL10C7
0.5
Spinal cord layer 5 C7
ipsi
SCL5C7
1
Spinal cord layer 6 C7
ipsi
SCL6C7
0.5
Spinal cord layer 3 C7
ipsi
SCL3C7
1
Spinal cord layer 4 C7
ipsi
SCL4C7
1
Spinal cord layer 1 C7
ipsi
SCL1C7
0.5
Spinal cord layer 2 C7
ipsi
SCL2C7
0.5
Spinal cord layer 7 C7
ipsi
SCL7C7
0.5
Cervical segment 8
ipsi
CS8
-0.5
Lateral spinal nucleus C8
ipsi
LSpC8
-0.5
Spinal cord layers C8
ipsi
SCLC8
1
Area X C8
ipsi
SCL10C8
-0.5
Spinal cord layer 5 C8
ipsi
SCL5C8
-0.5
Thoracal segment 1
ipsi
T1
-0.5
Lateral spinal nucleus T1
ipsi
LSpT1
-0.5
Spinal cord layers T1
ipsi
SCLT1
1
Area X T1
ipsi
SCL10T1
-0.5
Spinal cord layer 5 T1
ipsi
SCL5T1
-0.5
Lateral spinal nucleus T2
ipsi
LSpT2
-0.5
Area X T2
ipsi
SCL10T2
-0.5
Spinal cord layer 5 T2
ipsi
SCL5T2
-0.5
Lateral spinal nucleus T3
ipsi
LSpT3
-0.5
Area X T3
ipsi
SCL10T3
-0.5
Spinal cord layer 5 T3
ipsi
SCL5T3
-0.5
Lateral spinal nucleus T4
ipsi
LSpT4
-0.5
Area X T4
ipsi
SCL10T4
-0.5
Spinal cord layer 5 T4
ipsi
SCL5T4
-0.5
Lateral spinal nucleus T5
ipsi
LSpT5
-0.5
Area X T5
ipsi
SCL10T5
-0.5
Spinal cord layer 5 T5
ipsi
SCL5T5
-0.5
Thoracal segment 6
ipsi
T6
1
Lateral spinal nucleus T6
ipsi
LSpT6
-0.5
Area X T6
ipsi
SCL10T6
-0.5
Spinal cord layer 5 T6
ipsi
SCL5T6
-0.5
Thoracal segment 7
ipsi
T7
1
Lateral spinal nucleus T7
ipsi
LSpT7
-0.5
Area X T7
ipsi
SCL10T7
-0.5
Spinal cord layer 5 T7
ipsi
SCL5T7
-0.5
Thoracal segment 8
ipsi
T8
1
Lateral spinal nucleus T8
ipsi
LSpT8
-0.5
Area X T8
ipsi
SCL10T8
-0.5
Spinal cord layer 5 T8
ipsi
SCL5T8
-0.5
Thoracal segment 9
ipsi
T9
1
Lateral spinal nucleus T9
ipsi
LSpT9
-0.5
Area X T9
ipsi
SCL10T9
-0.5
Spinal cord layer 5 T9
ipsi
SCL5T9
-0.5
Lateral spinal nucleus T10
ipsi
LSpT10
-0.5
Area X T10
ipsi
SCL10T10
-0.5
Spinal cord layer 5 T10
ipsi
SCL5T10
-0.5
Lateral spinal nucleus T11
ipsi
LSpT11
-0.5
Area X T11
ipsi
SCL10T11
-0.5
Spinal cord layer 5 T11
ipsi
SCL5T11
-0.5
Lateral spinal nucleus T12
ipsi
LSpT12
-0.5
Area X T12
ipsi
SCL10T12
-0.5
Spinal cord layer 5 T12
ipsi
SCL5T12
-0.5
Lateral spinal nucleus T13
ipsi
LSpT13
-0.5
Area X T13
ipsi
SCL10T13
-0.5
Spinal cord layer 5 T13
ipsi
SCL5T13
-0.5
Lateral spinal nucleus L1
ipsi
LSpL1
-0.5
Area X L1
ipsi
SCL10L1
-0.5
Spinal cord layer 5 L1
ipsi
SCL5L1
-0.5
Lateral spinal nucleus L2
ipsi
LSpL2
-0.5
Area X L2
ipsi
SCL10L2
-0.5
Spinal cord layer 5 L2
ipsi
SCL5L2
-0.5
Lateral spinal nucleus L3
ipsi
LSpL3
-0.5
Area X L3
ipsi
SCL10L3
-0.5
Spinal cord layer 5 L3
ipsi
SCL5L3
-0.5
Lateral spinal nucleus L4
ipsi
LSpL4
-0.5
Area X L4
ipsi
SCL10L4
-0.5
Spinal cord layer 5 L4
ipsi
SCL5L4
-0.5
Lateral spinal nucleus L5
ipsi
LSpL5
-0.5
Area X L5
ipsi
SCL10L5
-0.5
Spinal cord layer 5 L5
ipsi
SCL5L5
-0.5
Lumbar segment 6
ipsi
L6
0.5
Lateral spinal nucleus L6
ipsi
LSpL6
-0.5
Area X L6
ipsi
SCL10L6
-0.5
Spinal cord layer 5 L6
ipsi
SCL5L6
-0.5
Lateral spinal nucleus S1
ipsi
LSpS1
-0.5
Area X S1
ipsi
SCL10S1
-0.5
Deep dorsal horn S1
ipsi
DDHS1
-0.5
Spinal cord layer 5 S1
ipsi
SCL5S1
-0.5
Lateral spinal nucleus S2
ipsi
LSpS2
-0.5
Area X S2
ipsi
SCL10S2
-0.5
Deep dorsal horn S2
ipsi
DDHS2
-0.5
Spinal cord layer 5 S2
ipsi
SCL5S2
-0.5
Lateral spinal nucleus S3
ipsi
LSpS3
-0.5
Area X S3
ipsi
SCL10S3
-0.5
Deep dorsal horn S3
ipsi
DDHS3
-0.5
Spinal cord layer 5 S3
ipsi
SCL5S3
-0.5
Lateral spinal nucleus S4
ipsi
LSpS4
-0.5
Area X S4
ipsi
SCL10S4
-0.5
Deep dorsal horn S4
ipsi
DDHS4
-0.5
Spinal cord layer 5 S4
ipsi
SCL5S4
-0.5
Lateral spinal nucleus Co1
ipsi
LSpCo1
-0.5
Deep dorsal horn Co1
ipsi
DDHCo1
-0.5
Lateral spinal nucleus Co2
ipsi
LSpCo2
-0.5
Deep dorsal horn Co2
ipsi
DDHCo2
-0.5
Lateral spinal nucleus Co3
ipsi
LSpCo3
-0.5
Deep dorsal horn Co3
ipsi
DDHCo3
-0.5
Peduncularpontine nucleus
contra
PPN
1
Substantia nigra compact part
contra
SNC
3
Peripeduncular area
contra
PPA
0
Dorsal tegmental nucleus lateral part
contra
DLTN
0.5
Pedunculopontine tegmental nucleus
contra
PPTg
1
Pedunculopontine tegmental nucleus pars compacta
contra
PPNC
-0.5
Pedunculopontine tegmental nucleus pars dissipata
contra
PPNd
1
Locus coeruleus
contra
LC
0.5
Peribrachial region
contra
PBR
0.5
Parabrachial nucleus
contra
PB
0.5
Lateral parabrachial nucleus
contra
LPB
0.5
Dorsal raphe nucleus
contra
DR
1
Dorsal raphe nucleus rostral part
contra
DRr
2
Lateral zone
contra
LHA
1
Ventrobasal complex
contra
VB
0
Caudate putamen
contra
CPu
2
Subthalamic nucleus
contra
STh
3
Prefrontal cortex
contra
PFC
-3
Lateral agranular prefrontal cortex
contra
AGl
-0.5
Lateral spinal nucleus C1
contra
LSpC1
-0.5
Spinal cord layers C1
contra
SCLC1
2
Area X C1
contra
SCL10C1
-0.5
Spinal cord layer 5 C1
contra
SCL5C1
-0.5
Lateral spinal nucleus C2
contra
LSpC2
-0.5
Spinal cord layers C2
contra
SCLC2
2
Area X C2
contra
SCL10C2
-0.5
Spinal cord layer 5 C2
contra
SCL5C2
-0.5
Lateral spinal nucleus C3
contra
LSpC3
-0.5
Spinal cord layers C3
contra
SCLC3
1
Area X C3
contra
SCL10C3
-0.5
Spinal cord layer 5 C3
contra
SCL5C3
-0.5
Lateral spinal nucleus C4
contra
LSpC4
-0.5
Spinal cord layers C4
contra
SCLC4
1
Area X C4
contra
SCL10C4
-0.5
Spinal cord layer 5 C4
contra
SCL5C4
-0.5
Lateral spinal nucleus C5
contra
LSpC5
-0.5
Spinal cord layers C5
contra
SCLC5
1
Area X C5
contra
SCL10C5
-0.5
Spinal cord layer 5 C5
contra
SCL5C5
-0.5
Lateral spinal nucleus C6
contra
LSpC6
-0.5
Spinal cord layers C6
contra
SCLC6
1
Area X C6
contra
SCL10C6
-0.5
Spinal cord layer 5 C6
contra
SCL5C6
-0.5
Lateral spinal nucleus C7
contra
LSpC7
0.5
Spinal cord layers C7
contra
SCLC7
1
Area X C7
contra
SCL10C7
0.5
Spinal cord layer 5 C7
contra
SCL5C7
1
Spinal cord layer 6 C7
contra
SCL6C7
0.5
Spinal cord layer 3 C7
contra
SCL3C7
1
Spinal cord layer 4 C7
contra
SCL4C7
1
Spinal cord layer 7 C7
contra
SCL7C7
0.5
Lateral spinal nucleus C8
contra
LSpC8
-0.5
Spinal cord layers C8
contra
SCLC8
1
Area X C8
contra
SCL10C8
-0.5
Spinal cord layer 5 C8
contra
SCL5C8
-0.5
Lateral spinal nucleus T1
contra
LSpT1
-0.5
Spinal cord layers T1
contra
SCLT1
1
Area X T1
contra
SCL10T1
-0.5
Spinal cord layer 5 T1
contra
SCL5T1
-0.5
Lateral spinal nucleus T2
contra
LSpT2
-0.5
Area X T2
contra
SCL10T2
-0.5
Spinal cord layer 5 T2
contra
SCL5T2
-0.5
Lateral spinal nucleus T3
contra
LSpT3
-0.5
Area X T3
contra
SCL10T3
-0.5
Spinal cord layer 5 T3
contra
SCL5T3
-0.5
Lateral spinal nucleus T4
contra
LSpT4
-0.5
Area X T4
contra
SCL10T4
-0.5
Spinal cord layer 5 T4
contra
SCL5T4
-0.5
Lateral spinal nucleus T5
contra
LSpT5
-0.5
Area X T5
contra
SCL10T5
-0.5
Spinal cord layer 5 T5
contra
SCL5T5
-0.5
Lateral spinal nucleus T6
contra
LSpT6
-0.5
Area X T6
contra
SCL10T6
-0.5
Spinal cord layer 5 T6
contra
SCL5T6
-0.5
Lateral spinal nucleus T7
contra
LSpT7
-0.5
Area X T7
contra
SCL10T7
-0.5
Spinal cord layer 5 T7
contra
SCL5T7
-0.5
Lateral spinal nucleus T8
contra
LSpT8
-0.5
Area X T8
contra
SCL10T8
-0.5
Spinal cord layer 5 T8
contra
SCL5T8
-0.5
Lateral spinal nucleus T9
contra
LSpT9
-0.5
Area X T9
contra
SCL10T9
-0.5
Spinal cord layer 5 T9
contra
SCL5T9
-0.5
Lateral spinal nucleus T10
contra
LSpT10
-0.5
Area X T10
contra
SCL10T10
-0.5
Spinal cord layer 5 T10
contra
SCL5T10
-0.5
Lateral spinal nucleus T11
contra
LSpT11
-0.5
Area X T11
contra
SCL10T11
-0.5
Spinal cord layer 5 T11
contra
SCL5T11
-0.5
Lateral spinal nucleus T12
contra
LSpT12
-0.5
Area X T12
contra
SCL10T12
-0.5
Spinal cord layer 5 T12
contra
SCL5T12
-0.5
Lateral spinal nucleus T13
contra
LSpT13
-0.5
Area X T13
contra
SCL10T13
-0.5
Spinal cord layer 5 T13
contra
SCL5T13
-0.5
Lateral spinal nucleus L1
contra
LSpL1
-0.5
Area X L1
contra
SCL10L1
-0.5
Spinal cord layer 5 L1
contra
SCL5L1
-0.5
Lateral spinal nucleus L2
contra
LSpL2
-0.5
Area X L2
contra
SCL10L2
-0.5
Spinal cord layer 5 L2
contra
SCL5L2
-0.5
Lateral spinal nucleus L3
contra
LSpL3
-0.5
Area X L3
contra
SCL10L3
-0.5
Spinal cord layer 5 L3
contra
SCL5L3
-0.5
Lateral spinal nucleus L4
contra
LSpL4
-0.5
Area X L4
contra
SCL10L4
-0.5
Spinal cord layer 5 L4
contra
SCL5L4
-0.5
Lateral spinal nucleus L5
contra
LSpL5
-0.5
Area X L5
contra
SCL10L5
-0.5
Spinal cord layer 5 L5
contra
SCL5L5
-0.5
Lateral spinal nucleus L6
contra
LSpL6
-0.5
Area X L6
contra
SCL10L6
-0.5
Spinal cord layer 5 L6
contra
SCL5L6
-0.5
Lateral spinal nucleus S1
contra
LSpS1
-0.5
Area X S1
contra
SCL10S1
-0.5
Deep dorsal horn S1
contra
DDHS1
-0.5
Spinal cord layer 5 S1
contra
SCL5S1
-0.5
Lateral spinal nucleus S2
contra
LSpS2
-0.5
Area X S2
contra
SCL10S2
-0.5
Deep dorsal horn S2
contra
DDHS2
-0.5
Spinal cord layer 5 S2
contra
SCL5S2
-0.5
Lateral spinal nucleus S3
contra
LSpS3
-0.5
Area X S3
contra
SCL10S3
-0.5
Deep dorsal horn S3
contra
DDHS3
-0.5
Spinal cord layer 5 S3
contra
SCL5S3
-0.5
Lateral spinal nucleus S4
contra
LSpS4
-0.5
Area X S4
contra
SCL10S4
-0.5
Deep dorsal horn S4
contra
DDHS4
-0.5
Spinal cord layer 5 S4
contra
SCL5S4
-0.5
Lateral spinal nucleus Co1
contra
LSpCo1
-0.5
Deep dorsal horn Co1
contra
DDHCo1
-0.5
Lateral spinal nucleus Co2
contra
LSpCo2
-0.5
Deep dorsal horn Co2
contra
DDHCo2
-0.5
Lateral spinal nucleus Co3
contra
LSpCo3
-0.5
Deep dorsal horn Co3
contra
DDHCo3
-0.5
Lung
ipsi
OrgsLung
-10
Trachea side
ipsi
OrgsTras
-10
Key for weights
Value
Weight
-3
unknown
-2
fibers of passage
-1
not clear
-0.5
exists
0
not present
0.5
very light
1
light / sparse
1.5
light / moderate
2
moderate / dense
2.5
moderate / strong
3
strong
4
very strong
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