University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Reticular thalamic nucleus rostrocaudal part left


Abbreviation
Rtrc
Color       
Superior regionsReticular thalamic nucleus

SynonymsAbbr.Language
Reticular thalamic nucleus rostrocaudal partRtrc 
Rostrocaudal part of reticular thalamic nucleus Eng

Output to

NameSideAbbr.WeightDetails
Superior colliculus deep layersipsiSCd1
Tegmental areaipsiTGA2
Substantia nigra A9ipsiSN1
Locus coeruleusipsiLC2
Diagonal band of BrocaipsiDBB1.5
Medial septal nucleusipsiMS1.5
Medial mammillary nucleus lateral partipsiML2
Anterodorsal thalamic nucleusipsiAD3
Anteroventral thalamic nucleusipsiAV3
Zona incertaipsiZI2
Lateral habenular nucleusipsiLHb3
Anterior pretectal nucleusipsiAPT2
Bed nucleus of the stria terminalisipsiBST1.5
Central amygdaloid nucleusipsiCe1
Globus pallidusipsiGP1.5
Medial globus pallidusipsiMGP1.5
Subthalamic nucleusipsiSTh1
Infralimbic cortexipsiIL1.5
Prefrontal cortexipsiPFC1.5
Magnocellular nucleus of the posterior commissureipsiMCPC2
Lateral geniculate complexipsiLG1
Interpeduncular nucleusipsiIP2
Lateral septal nucleusipsiLS1.5
Locus coeruleuscontraLC1

Input from

NameSideAbbr.WeightDetails
Borders of the limbic cortexipsiBoLR1.5
Temporal association cortex 1 middle portion layer 3ipsiTeAmL3-0.5
Temporal association cortex 1 middle portion layer 4ipsiTeAmL4-0.5
Temporal association cortex 1 middle portion layer 6ipsiTeAmL6-0.5
Temporal association cortex 1 rostral part layer 3ipsiTeArL3-0.5
Temporal association cortex 1 rostral part layer 4ipsiTeArL4-0.5
Temporal association cortex 1 rostral part layer 6ipsiTeArL6-0.5
Temporal association cortex 1 rostroventral part layer 3ipsiTeArvL3-0.5
Temporal association cortex 1 rostroventral part layer 4ipsiTeArvL4-0.5
Temporal association cortex 1 rostroventral part layer 6ipsiTeArvL6-0.5
Sensory regionsipsiSR0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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