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Rat connectome



Medial globus pallidus left


Abbreviation
MGP
Color       
Superior regionsGlobus pallidus

SynonymsAbbr.Language
Globus pallidus medialisGPmLat
Internal segment of the pallidum of primatesEP 
Globus pallidus medial segment  
Globus pallidus internal segmentGPI 
Medial globus pallidusMGPEng
Entopeduncular nucleusEPN 
Endopeduncular nucleus  
Middle portion of globus pallidus Eng

SubregionsSide
Medial globus pallidus caudal partleft
Medial globus pallidus central partleft
Medial globus pallidus dorsal partleft
Medial globus pallidus lateral partleft
Medial globus pallidus medial partleft
Medial globus pallidus rostral partleft
Medial globus pallidus ventral partleft
Medial globus pallidus posterior partleft

Output to

NameSideAbbr.WeightDetails
Nuclei of the lateral lemniscusipsiNLL1
Nucleus of DarkschewitschipsiDk0
Oculomotor nucleusipsi31
Ventrolateral periaqueductal grayipsiVLPAG2
Red nucleusipsiR-0.5
Prerubral fieldipsiPR2
Inferior colliculusipsiICOL-3
Superior colliculusipsiSC1
Superior colliculus caudal partipsicSC1
Superior colliculus medial partipsimSC1
Superior colliculus rostral partipsirSC1
Tegmental areaipsiTGA-0.5
Central tegmental field dorsal partipsiTGACd0
Midbrain extrapyramidal areaipsiMEA1
Peduncularpontine nucleusipsiPPN1
Peduncularpontine nucleus rostral partipsiPPNR-0.5
Substantia nigra A9ipsiSN1.5
Substantia nigra compact partipsiSNC2
Substantia nigra reticular partipsiSNR2
Substantia nigra reticular part caudal tieripsiSNRca0.5
Substantia nigra reticular part central divisionipsiSNRce1
Substantia nigra reticular part dorsal tieripsiSNRD1.5
Substantia nigra reticular part lateral tieripsiSNRL0.5
Ventral tegmental area A10ipsiVTA1
Ventral peribrachial nucleusipsiVPeN-0.5
Ventral tegmental area A10 lateral partipsiVTAL-0.5
Ventral tegmental area A10 rostrolateral partipsiVTArL1
Middle part of the retrorubral fieldipsiRRmi1
Ventromedial mesencephalic tegmentumipsiVMTg-0.5
Laterodorsal tegmental nucleusipsiLDTg0.5
Ventral tegmental nucleusipsiVTg1
Dorsal tegmental nucleusipsiDTg1
Pedunculopontine tegmental nucleusipsiPPTg2
Pedunculopontine tegmental nucleus pars compactaipsiPPNC0
Edinger Westphal nucleusipsiEW1
Locus coeruleusipsiLC1
Mesencephalic reticular formationipsiMRF1
Deep mesencephalic nucleusipsiDpMe1
Deep mesencephalic nucleus intermediateipsiDpMei1
Deep mesencephalic nucleus lateral partipsiDpMeL3
Deep mesencephalic nucleus medial partipsiDpMeM1
Deep mesencephalic nucleus ventromedial partipsiDpMeVM3
Pontine reticular nucleusipsiPRN3
Peribrachial regionipsiPBR2
Parabrachial nucleusipsiPB3
Lateral parabrachial nucleusipsiLPB1
Lateral reticular nucleusipsiLRt2
Parvicellular reticular nucleus caudal portionipsipRNc2
Parvicellular reticular nucleus rostral portionipsipRNr2
Raphe nucleiipsiRAN1
Medial raphe nucleusipsiMeR-0.5
Basal forebrainipsiBAF1
Endopiriform systemipsiEnN3
Dorsal regionipsiDHR2.5
Lateral division of the hypothalamusipsiLdHYPO-0.5
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area at the level of the caudal half to the ventromedial hypothalamic nucleusipsiLHAaCVMH1
Medial division of the hypothalamusipsiMdH2.5
Medial hypothalamic groupipsiMHYPOg-0.5
A8 dopamine cells retrorubral group lateral partipsiRRFL0
A8 dopamine cells retrorubral group medial partipsiRRFm2
Parafascicular thalamic nucleusipsiPF3
Parafascicular thalamic nucleus lateral partipsiPFL-0.5
Parafascicular thalamic nucleus medial partipsiPFM-0.5
Posterior thalamic nuclear group dorsocaudal partipsiPoDC0
Mediodorsal thalamic nucleusipsiMD2
Mediodorsal thalamic nucleus lateral partipsiMDL3
Mediodorsal thalamic nucleus posterior partipsiMDP3
Center of the rostral mediodorsal thalamic nucleusipsiMDcr-0.5
Mediodorsal thalamic nucleus paralemellar divisionipsiMDpL-0.5
Submedius thalamic nucleus lateral partipsiSubL3
Submedius thalamic nucleus posterior partipsiSubPo3
Paraventricular thalamic nucleusipsiPV2.5
Ventral anterior-lateral complex of the thalamusipsiVAL2
Ventro anterior thalamic nucleusipsiVA-0.5
Ventrolateral thalamic nucleusipsiVL4
Ventrolateral thalamic nucleus lateral mediodorsal partipsiVLLMD1
Ventrolateral thalamic nucleus rostromedial partipsiVLRM1
Ventral posterolateral thalamic nucleus posterior partipsiVPLP0
Medial part of ventral posteromedial thalamic nucleusipsiVPMm0
Ventromedial thalamic nucleusipsiVM2
Ventromedial thalamic nucleus caudal part lateral partipsiVMcL-0.5
Parafascicular centre-median complexipsiPFCM2.5
Parafascicular nucleusipsiPFa-0.5
Laterodorsal thalamic nucleusipsiLD-0.5
Posterior groupipsiPTG-0.5
Reticular thalamic nucleusipsiRt2
Reticular thalamic nucleus caudal partipsiRtc-10
Reticular thalamic nucleus intermediate partipsiRti-10
Reticular thalamic nucleus lateral partipsiRtL0
Reticular thalamic nucleus rostral partipsiRtr-10
Ventral medial nucleus of the thalamusipsiVMT-0.5
Zona incertaipsiZI3
Nucleus of the fields of ForelipsiF-2
Zona incerta ventral partipsiZIV2.5
HabenulaipsiHAB2.5
Lateral habenular nucleusipsiLHb4
Lateral habenular nucleus lateral partipsiLHbL4
Lateral habenular nucleus medial partipsiLHbM1
Lateral habenular nucleus ventral partipsiLHbv-0.5
Lateral habenular nucleus caudal subfieldipsiLHbcs4
Lateral habenular nucleus ventrolateral partipsiLHbVL3
Medial habenular nucleusipsiMHb-0.5
Internal capsuleipsiic1
Medial forebrain bundle at the level of the anterior commissureipsimfbac0
Medial forebrain bundle at the level of the lateral preoptic areraipsimfbLpa0
Medial forebrain bundle at the level of the anterior hypothalamic nucleusipsimfbahn0
Medial forebrain bundle at the level of the lateral hypothalamusipsimfbLH-2
Medial forebrain bundle at the level of the posterior hypothalamic nucleusipsimfbPH-2
Stria medullaris of the thalamusipsism3
Lateral terminal nucleus of the accessory optic tractipsiLTeN2
Amygdaloid complexipsiAC0.5
Basolateral amygdaloid nucleusipsiBL0.5
Anterior cortical amygdaloid nucleusipsiACo2
Posterior amygdaloid nucleusipsiCOAp3
Nucleus of the lateral olfactory tractipsiLOT3
Periamygdaloid complexipsiPAC3
Medial amygdaloid nucleusipsiMe3
Globus pallidusipsiGP3
Lateral globus pallidusipsiLGP2
Medial globus pallidusipsiMGP2
StriatumipsiSTR-0.5
Accumbens nucleus coreipsiAcbC-0.5
Caudate putamenipsiCPu2
Anterior striatumipsiAStri3
Subthalamic nucleusipsiSTh2
Subthalamic nucleus medial partipsiSThM1.5
Cerebral cortexipsiCEC2
HippocampusipsiHIPP-0.5
Anterodorsal hippocampal formationipsiHIPPad1
Cingulate cortexipsiCg1
Prelimbic cortexipsiPrL0
Prelimbic cortex layer 2ipsiPrLL20
Infralimbic cortexipsiIL0
NeocortexipsiNEOCX0.5
Parietal association cortexipsiPtA0.5
Temporal cortexipsiTE0.5
Auditory regionsipsiAU2
Dorsolateral anterior cortexipsiDLAU3
Frontal polar cortexipsiFP0.5
Agranular insular cortex dorsal partipsiAID0
Agranular insular cortex posterior partipsiAIP0
Agranular insular cortex posterior part layer 1bipsiAIPL1b0
Agranular insular cortex posterior part layer 5ipsiAIPL50
Agranular insular cortex posterior part layer 6ipsiAIPL60
Perirhinal cortexipsiA350
Perirhinal cortex deep layer 1ipsiPRhdeL10
Perirhinal cortex layer 5ipsiA35L50
Perirhinal cortex layer 6ipsiA35L60
Prefrontal cortex dorsolateral partipsiPFCd-0.5
Somatomotoric regionsipsiSMR1
Lateral agranular prefrontal cortexipsiAGl0.5
Forelimb motor cortexipsiFMCx-0.5
Sensory regionsipsiSR0.5
Primary somatosensory cortexipsiS1-0.5
Secondary somatosensory cortexipsiS2-0.5
Visual regionsipsiVR1
Primary visual cortexipsiV10.5
Interpeduncular nucleusipsiIP0
Interpeduncular nucleus dorsal subnucleusipsiIPRd1
Nuclei of the lateral lemniscuscontraNLL1
Central tegmental field dorsal partcontraTGACd0
Midbrain extrapyramidal areacontraMEA0.5
Substantia nigra reticular partcontraSNR2
Ventral peribrachial nucleuscontraVPeN-0.5
Laterodorsal tegmental nucleuscontraLDTg0.5
Ventral tegmental nucleuscontraVTg0.5
Dorsal tegmental nucleuscontraDTg1
Pedunculopontine tegmental nucleuscontraPPTg0.5
Locus coeruleuscontraLC0.5
Lateral parabrachial nucleuscontraLPB0.5
Parafascicular thalamic nucleuscontraPF1
Ventrolateral thalamic nucleuscontraVL-0.5
Ventral medial nucleus of the thalamuscontraVMT-0.5
Zona incertacontraZI0
Lateral habenular nucleuscontraLHb0.5
Lateral habenular nucleus lateral partcontraLHbL0.5
Lateral habenular nucleus medial partcontraLHbM1
Lateral habenular nucleus caudal subfieldcontraLHbcs0.5
Medial habenular nucleuscontraMHb-0.5
Cingulate cortexcontraCg0.5
Bulbospongiosus muscleipsiMuscbsp1
Bulbospongiosus musclecontraMuscbsp1

Input from

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG1
Inferior colliculusipsiICOL0.5
Superior colliculusipsiSC0.5
Peduncularpontine nucleusipsiPPN3
Peduncularpontine nucleus rostral partipsiPPNR-0.5
Substantia nigra A9ipsiSN2
Substantia nigra compact partipsiSNC2
Substantia nigra compact part dorsal tieripsiSNCD-0.5
Substantia nigra compact part ventral tieripsiSNCV1
Substantia nigra compact part ventral tier dopaminergic neuron populationipsiSNCVdopa0.5
Substantia nigra lateral partipsiSNL-0.5
Substantia nigra reticular partipsiSNR2
Ventral tegmental area A10ipsiVTA1
Retrorubral nucleusipsiRR2
Laterodorsal tegmental nucleusipsiLDTg1
Dorsal tegmental nucleus lateral partipsiDLTN1
Pedunculopontine tegmental nucleusipsiPPTg3
Pedunculopontine tegmental nucleus pars compactaipsiPPNC2
Pedunculopontine tegmental nucleus pars dissipataipsiPPNd3
Locus coeruleusipsiLC2
Mesencephalic reticular formationipsiMRF-0.5
Deep mesencephalic nucleusipsiDpMe2
Deep mesencephalic nucleus dorsal partipsiDpMeD2
Deep mesencephalic nucleus intermediateipsiDpMei1
Deep mesencephalic nucleus medial partipsiDpMeM1
Deep mesencephalic nucleus ventral partipsiDpMeV2
Pontine reticular nucleusipsiPRN2
Pontine reticular nucleus oral partipsiPnO3
Peribrachial regionipsiPBR3
Cuneiforme nucleusipsiCnF2
Cuneiforme nucleus ventral partipsiCnFV1
Peribrachial cuneiforme nucleusipsiCnFPB1
Parabrachial nucleusipsiPB2
Lateral parabrachial nucleusipsiLPB1
Medullary reticular nucleus dorsal partipsiMdDd2
Nucleus of the solitary tractipsiSol1
Dorsal raphe nucleusipsiDR2
Dorsal raphe nucleus dorsomedial subdivisionipsiDRdm2
Dorsal raphe nucleus lateral partipsiDRLa1
Dorsal raphe nucleus lateral wingipsiDRlw1
Dorsal raphe nucleus medial partipsiDRNM2
Linear oral nucleus of the rapheipsiLIOR1
Median raphe nucleusipsiMnR2
Medial raphe nucleusipsiMeR3
Superior central raphe nucleusipsiCS2
Paragigantocellular reticular nucleus medial partipsiPGiM-0.5
Basal forebrainipsiBAF-2
Lateral hypothalamic area [Region of tuber cinereum]ipsiLHTUC1
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area perifornical partipsiPFx3
Centromedial nucleus of hypothalamusipsiMHAcm2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM3
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM3
Dorsomedial hypothalamic nucleus [Periventricular zone]ipsiDMpz1
A8 dopamine cells retrorubral groupipsiRRF-0.5
Perifornical nucleusipsiPeF2
Dorsal thalamusipsiDOR2
Centrolateral thalamic nucleusipsiCL2
Centrolateral thalamic nucleus anteromedial partipsiCLAM2
Centrolateral thalamic nucleus posterolateral partipsiCLPL2
Parafascicular thalamic nucleusipsiPF2
Parafascicular thalamic nucleus medial partipsiPFM2
Posterior thalamic nuclear groupipsiPo2
Mediodorsal thalamic nucleusipsiMD2
Ventral posteromedial thalamic nucleus parvicellular partipsiVPMpc2
Ethmoid thalamic nucleusipsiEth2
Parafascicular centre-median complexipsiPFCM0
Reticular thalamic nucleusipsiRt2
Reticular thalamic nucleus rostrocaudal partipsiRtrc1.5
Zona incertaipsiZI3
Lateral edge of the nucleus of the fields of ForelipsiLeF-0.5
Zona incerta caudal partipsiZIC-0.5
Zona incerta dorsal partipsiZID3
Medial part of the dorsal zona incertaipsiZIDm-0.5
Zona incerta rostral partipsiZIR-0.5
Zona incerta ventral partipsiZIV-0.5
Lateral habenular nucleusipsiLHb-0.5
Internal capsuleipsiic-0.5
Basal nucleusipsiBnc2
Basolateral amygdaloid nucleusipsiBL2
Lateral amygdaloid nucleusipsiLA2
Bed nucleus of the stria terminalisipsiBST-2
Central amygdaloid nucleusipsiCe1
Amygdalopiriform transition areaipsiAPir2
Anterior cortical amygdaloid nucleusipsiACo2
Posterior amygdaloid nucleusipsiCOAp3
Nucleus of the lateral olfactory tractipsiLOT3
Periamygdaloid complexipsiPAC3
Medial amygdaloid nucleusipsiMe3
Amygdalohippocampal areaipsiAHi2
Globus pallidusipsiGP3
Dorsal globus pallidusipsiDGP3
Globus pallidus rostrolateral partipsiGPrL2
Lateral globus pallidusipsiLGP3
External pallidus prototypic neuronesipsiLGPpn-0.5
Medial globus pallidusipsiMGP2
Caudal part of medial globus pallidus rostral partipsiMGPrc2
Medial globus pallidus posterior partipsiMGPP-0.5
Rostral globus pallidusipsiGPr-3
Subpallidal regionipsiSuPa-0.5
Ventral pallidumipsiVP2
Ventral pallidum dorsal partipsiVPd1
StriatumipsiSTR3
Accumbens nucleusipsiAc2
Accumbens nucleus coreipsiAcbC1
Dorsal coreipsiAcbCd1
Dorsomedial coreipsiAcbCdm1
Lateral coreipsiAcbCl1
Rostral coreipsiAcbCr-0.5
Ventral coreipsiAcbCv1
Rostral accumbens shellipsiAcbShr2
Medial accumbensipsiAcbM-0.5
Caudate putamenipsiCPu3
Anterior striatumipsiAStri3
Dorsomedial striatumipsiCPudm2
Medial striatumipsiCPum2
Dorsomedial caudate putamenipsiCPuDM-0.5
Caudal striatumipsiCPuc1
Central striatumipsiCPuce2
Dorsal striatumipsiCPud3
Dorsolateral striatumipsiCPudl2
Posterior caudate putamenipsiCPup2
Rostral striatumipsiCPur-0.5
Rostral striatum medial partipsiCPurme-0.5
Striatal matrix compartmentipsiSMC-0.5
Striatal patch compartmentipsiSPC-0.5
Ventral striatumipsiCPuv2
Ventrolateral striatumipsiCPuvl2
Ventromedial striatumipsiCPuvm2
Jaw region of the striatumipsiCPuJaw3
Lateral part of the middle caudate putamenipsiCPuMiL-0.5
Middle caudate putamen dorsoventrallyipsiCPuMidv-0.5
Fundus of the striatumipsiFS1
Subthalamic nucleusipsiSTh3
Parasubthalamic nucleusipsiPSTh1.5
Subthalamic nucleus caudomedial partipsiSThCM-0.5
Subthalamic nucleus extreme dorsomedial partipsiSThedm0
Subthalamic nucleus lateral partipsiSThl1
Subthalamic nucleus medial partipsiSThM1.5
Subthalamic nucleus middle partipsiSThm2
Subthalamic nucleus medial capipsiSThMc1.5
Cerebral cortexipsiCEC-0.5
Cingulate cortexipsiCg2
Prelimbic cortexipsiPrL2
Frontal cortex area 2ipsiFr22
Parietal association cortexipsiPtA2
Insular cortexipsiICX2
Dorsal part of the granular insular cortex rostroventrally adjacent to the rostralmost part of S2ipsidGlrvs20
Prefrontal cortexipsiPFC2
Lateral agranular prefrontal cortexipsiAGl2
Rostrolateral part of the lateral agranular prefrontal cortexipsiAGlRL-0.5
Rostromedial border of the lateral agranular prefrontal cortexipsiAGlrm-0.5
Visual regionsipsiVR2
Orbital cortexipsiOrC2
Ventrolateral orbital area deep layersipsiVLOd2
Olfactory tubercleipsiTuO0
Peduncularpontine nucleuscontraPPN1
Dorsal tegmental nucleus lateral partcontraDLTN0.5
Pedunculopontine tegmental nucleuscontraPPTg1.5
Pedunculopontine tegmental nucleus pars compactacontraPPNC1
Pedunculopontine tegmental nucleus pars dissipatacontraPPNd1
Lateral cerebellar nucleuscontraCERL-0.5
Locus coeruleuscontraLC0.5
Deep mesencephalic nucleus lateral partcontraDpMeL1
Peribrachial regioncontraPBR0.5
Lateral parabrachial nucleuscontraLPB0.5
Medullary reticular nucleus dorsal partcontraMdDd3
Dorsal raphe nucleuscontraDR0.5
Dorsal raphe nucleus lateral wingcontraDRlw0
Dorsal raphe nucleus medial partcontraDRNM0
Linear oral nucleus of the raphecontraLIOR0
Superior central raphe nucleuscontraCS0
Parafascicular thalamic nucleuscontraPF-0.5
Caudate putamencontraCPu-0.5
Dorsal part of the granular insular cortex rostroventrally adjacent to the rostralmost part of S2contradGlrvs20

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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