University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Superior colliculus rostrocaudal part left


Abbreviation
SCrc
Color       
Superior regionsSuperior colliculus

SynonymsAbbr.Language
Superior colliculus rostrocaudal partSCrcEng

Output to

NameSideAbbr.WeightDetails
Mesencephalic trigeminal nucleusipsiMe50.5
Ventral lateral geniculate nucleus lateral partipsiVLGl2
Ventral lateral geniculate nucleus ventrolateral partipsiVLGvL2
Mesencephalic trigeminal nucleuscontraMe50.5

Input from

NameSideAbbr.WeightDetails
Intermediate reticular nucleusipsiIRt1
Medial reticular formationipsiRFm1
Mesopontine reticular formationipsiMPRF2
Pontine reticular nucleusipsiPRN2
Medullary reticular nucleusipsiMdD1
Medullary reticular nucleus dorsal partipsiMdDd3
Parvicellular reticular nucleusipsiPCRt3
Motor trigeminal nucleusipsiMo52
Lower temporal crescent of the retinaipsiRETLtc3
Peripheral zone of the lower temporal crescent of the retinaipsiRETLtcP2
Medial agranular prefrontal cortex layer 5ipsiAGmL50
Primary somatosensory cortex layer 5ipsiS1L50
Ventral lateral geniculate nucleus lateral partipsiVLGl2
Ventral lateral geniculate nucleus ventrolateral partipsiVLGvL2
Cervical segments rostral partipsiCSegR2
Anterior interposed nucleuscontraAIN1
Intermediate reticular nucleuscontraIRt1.5
Medial reticular formationcontraRFm1.5
Mesopontine reticular formationcontraMPRF3
Pontine reticular nucleuscontraPRN3
Medullary reticular nucleuscontraMdD1.5
Medullary reticular nucleus dorsal partcontraMdDd4
Parvicellular reticular nucleuscontraPCRt4
Motor trigeminal nucleuscontraMo53
Lower temporal crescent of the retinacontraRETLtc3
Medial agranular prefrontal cortex layer 5contraAGmL50
Primary somatosensory cortex layer 5contraS1L50
Cervical segments rostral partcontraCSegR3
Facial nerveipsi7fn2
Facial nervecontra7fn3

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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