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Rat connectome

Medial agranular prefrontal cortex layer 5 left

Abbreviation	AGmL5
Color
Superior regions	Medial agranular prefrontal cortex layers

Synonyms	Abbr.	Language
Medial agranular prefrontal cortex layer 5	AGmL5	Eng

Subregions	Side
Medial agranular prefrontal cortex layer 5 a	left
Medial agranular prefrontal cortex layer 5 b	left

Output to

Name	Side	Abbr.	Weight
Periaqueductal gray	ipsi	PAG	3
Brachium of the superior colliculus	ipsi	bsc	-2
Superior colliculus caudal part	ipsi	cSC	-2
Superior colliculus lateral part	ipsi	SCL	3
Superior colliculus intermediate layers	ipsi	SCi	0
Superior colliculus deep layers	ipsi	SCd	2
Superior colliculus mediolateral part	ipsi	SCmL	0
Superior colliculus rostrocaudal part	ipsi	SCrc	0
Tegmental area	ipsi	TGA	1
Edinger Westphal nucleus	ipsi	EW	3
Pons	ipsi	P	3
Reticulotegmental nucleus	ipsi	RETn	1
Pontine nuclei	ipsi	Pn	3
Mesencephalic trigeminal nucleus caudal pole	ipsi	Me5cp	4
Nucleus of the solitary tract	ipsi	Sol	1.5
Dorsal motor nucleus of vagus	ipsi	10	1.5
Anteromedial thalamic nucleus	ipsi	AM	1
Anteromedial thalamic nucleus caudal part	ipsi	AMc	1
Anteroventral thalamic nucleus ventromedial part	ipsi	AVVM	1
Interoanteromedial thalamic nucleus	ipsi	IAM	1
Mediodorsal thalamic nucleus lateral part	ipsi	MDL	2
Ventromedial thalamic nucleus lateral part	ipsi	VML	1.5
Laterodorsal thalamic nucleus rostrocaudal part	ipsi	LDrc	1
Reticular thalamic nucleus rostral part	ipsi	Rtr	1
Claustrum	ipsi	Cl	1.5
Dorsocentral striatum	ipsi	DCS	3
Dorsolateral striatum dorsal part	ipsi	CPudlD	1
Retrosplenial cortex middle part layer 1	ipsi	RSmiL1	-0.5
Retrosplenial cortex middle part layer 2	ipsi	RSmiL2	-0.5
Retrosplenial cortex middle part layer 3	ipsi	RSmiL3	-0.5
Retrosplenial cortex middle part layer 4	ipsi	RSmiL4	-0.5
Retrosplenial cortex middle part layer 5	ipsi	RSmiL5	-0.5
Retrosplenial cortex middle part layer 6	ipsi	RSmiL6	-0.5
Area 29a	ipsi	A29a	-0.5
Parietal cortex posterior area layers	ipsi	ParPLa	3
Parietal cortex posterior area medial portion	ipsi	mPPC	3
Agranular insular cortex	ipsi	AI	1
Perirhinal cortex	ipsi	A35	2
Ectorhinal cortex	ipsi	A36	2
Postrhinal cortex	ipsi	POR	3
Lateral agranular prefrontal cortex	ipsi	AGl	0.5
Lateral agranular prefrontal cortex layer 1	ipsi	AGlL1	-0.5
Primary somatosensory cortex barrel field	ipsi	S1BF	0.5
Anterior part of head region of the primary somatosensory cortex	ipsi	S1aFR	3
Lateral anterior part of head region of the primary somatosensory cortex	ipsi	S1LaFR	3
Primary somatosensory cortex forelimb region lateral part	ipsi	S1FLL	3
Primary somatosensory cortex forelimb region posterior part	ipsi	S1FLPo	3
Primary somatosensory cortex hindlimb region medial part	ipsi	S1HLMe	3
Primary somatosensory cortex hindlimb region posterior part	ipsi	S1HLPo	3
Proximal body region of the primary somatosensory cortex	ipsi	S1PBR	3
Primary visual cortex	ipsi	V1	3
Ventral orbital cortex	ipsi	VO	-0.5
Ventrolateral orbital area	ipsi	VLO	-0.5
Precommissural nucleus	ipsi	PrC	-0.5
Pyramidal tract	ipsi	py	1
Cervical segment 5	ipsi	CS5	2
Cervical segment 6	ipsi	CS6	2
Periaqueductal gray	contra	PAG	0
Superior colliculus	contra	SC	0
Brachium of the superior colliculus	contra	bsc	0
Superior colliculus caudal part	contra	cSC	0
Superior colliculus lateral part	contra	SCL	0
Superior colliculus intermediate layers	contra	SCi	0
Superior colliculus mediolateral part	contra	SCmL	0
Superior colliculus rostrocaudal part	contra	SCrc	0
Pontine nuclei	contra	Pn	1
Subnucleus reticularis dorsalis	contra	SRD	2
Mesencephalic trigeminal nucleus caudal pole	contra	Me5cp	2
Nucleus of the solitary tract	contra	Sol	1
Dorsal motor nucleus of vagus	contra	10	1
Anteromedial thalamic nucleus caudal part	contra	AMc	0.5
Anteroventral thalamic nucleus ventromedial part	contra	AVVM	0.5
Interoanteromedial thalamic nucleus	contra	IAM	0.5
Laterodorsal thalamic nucleus rostrocaudal part	contra	LDrc	0.5
Claustrum	contra	Cl	3
Striatum	contra	STR	3
Dorsolateral striatum dorsal part	contra	CPudlD	0.5
Medial agranular prefrontal cortex	contra	AGm	-0.5
Corticospinal tract of the cervical enlargement	contra	CSegEcst	-2
Kidney	contra	OrgsKid	4

Input from

Name	Side	Abbr.	Weight
Central medial thalamic nucleus	ipsi	CM	-0.5
Centre median nucleus	ipsi	CeMe	1.5
Centrolateral thalamic nucleus	ipsi	CL	-0.5
Paracentral thalamic nucleus	ipsi	PC	-0.5
Parafascicular thalamic nucleus	ipsi	PF	1.5
Rhomboid thalamic nucleus	ipsi	Rh	2
Posterior thalamic nuclear group	ipsi	Po	-0.5
Ventro anterior thalamic nucleus	ipsi	VA	3
Ventrolateral thalamic nucleus	ipsi	VL	2
Ventral posterolateral thalamic nucleus	ipsi	VPL	-0.5
Ventromedial thalamic nucleus	ipsi	VM	3
Intralaminar nuclei	ipsi	ILN	-0.5
Lateral posterior thalamic nucleus	ipsi	LP	0
Lateral posterior thalamic nucleus mediorostral part central region	ipsi	LPMRce	1
Lateral posterior thalamic nucleus mediorostral part lateral region	ipsi	LPMRl	1
Lateral posterior thalamic nucleus mediorostral part ventral region	ipsi	LPMRv	1
Laterodorsal thalamic nucleus ventrolateral part medial region	ipsi	LDVLm	1
Perirhinal cortex	ipsi	A35	2
Ectorhinal cortex	ipsi	A36	2
Postrhinal cortex	ipsi	POR	2
Medial agranular prefrontal cortex caudal part	ipsi	cAGm	-0.5
Anterior part of head region of the primary somatosensory cortex	ipsi	S1aFR	3
Lateral anterior part of head region of the primary somatosensory cortex	ipsi	S1LaFR	3
Primary somatosensory cortex forelimb region lateral part	ipsi	S1FLL	3
Primary somatosensory cortex forelimb region posterior part	ipsi	S1FLPo	3
Primary somatosensory cortex hindlimb region medial part	ipsi	S1HLMe	3
Primary somatosensory cortex hindlimb region posterior part	ipsi	S1HLPo	3
Proximal body region of the primary somatosensory cortex	ipsi	S1PBR	3
Dorsal geniculate nucleus lateral part	ipsi	DLGl	0

Key for weights

Value	Weight
-3	unknown
-2	fibers of passage
-1	not clear
-0.5	exists
0	not present
0.5	very light
1	light / sparse
1.5	light / moderate
2	moderate / dense
2.5	moderate / strong
3	strong
4	very strong