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Rat connectome



Pontine reticular nucleus left


Abbreviation
PRN
Color       
Superior regionsMesopontine reticular formation

SynonymsAbbr.Language
Reticular formation pontis  
Nucleus reticularis tegmenti pontis Eng
Reticular portion of the pons Eng
Pontine reticular region Eng
Pontine reticular field Eng
Pontine reticular nucleusPRNEng
Nucleus reticularis tegmenti pontisNRTPEng
Pontine reticular formationPRFEng
Reticular formation of pons Eng
Reticular formation of the pons Eng
Nucleus reticularis tegmenti pontisNRTPEng
Reticular nuclei of pons Eng
Pontine reticular nucleusPnOEng

SubregionsSide
Dorsolateral pontine reticular formationleft
Pontine reticular nucleus central partleft
Pontine reticular nucleus dorsal partleft
Pontine reticular nucleus lateral partleft
Pontine reticular nucleus laterocaudal partleft
Pontine reticular nucleus oral partleft
Pontine reticular nucleus paramedian partleft
Pontine reticular nucleus ventral partleft
Pontomesencephalic reticular formationleft
Ventrolateral pontine reticular formationleft
Ventromedial pontine reticular nucleusleft
Pericentral subdicision of-the pontine reticular nucleusleft
Medial margin of the pontine reticular nucleusleft
Lateral margin of the pontine reticular nucleusleft
Pericentral region of the nucleus reticularis tegmenti pontisleft
Sublaterodorsal arealeft
Subcoerulear arealeft
Oral pontine reticular regionleft
Taste related region of the pontine reticular nucleusleft
Pontine reticular nucleus rostrocaudal partleft
Pontine reticular nucleus rostral partleft
Pontine reticular nucleus caudal and pericentral partleft
Pontine reticular nucleus ventrocaudal partleft

Output to

NameSideAbbr.WeightDetails
Central grayipsiCG1
Central gray mesencephalic part intercollicular levelipsiCGMint-0.5
Lateroventral part of the central grayipsiCGLV-0.5
Nuclei of the lateral lemniscusipsiNLL2.5
Nucleus of DarkschewitschipsiDk2
Oculomotor nucleusipsi32
Oculomotor nucleus parvicellular partipsi3PC2
Medial accessory oculomotor nucleusipsiMA32
Rostral interstitial nucleus of medial longitudinal fasciculusipsiRI2
Periaqueductal grayipsiPAG1
Dorsal periaqueductal grayipsiDPAG1
Lateral periaqueductal grayipsiLPAG1
Periaqueductal gray caudal partipsiPAGc3
Periaqueductal gray lateroventral partipsiPAGLV1
Periaqueductal gray rostrocaudal extentipsiPAGroe1
Ventrolateral periaqueductal grayipsiVLPAG4
Red nucleusipsiR3
Prerubral fieldipsiPR3
Red nucleus caudal partipsiRnCa-0.5
Red nucleus medial partipsiRmed-0.5
Inferior colliculusipsiICOL-0.5
Superior colliculusipsiSC2
Central gray of the superior colliculusipsicgSC3
Superior colliculus caudolateral partipsiSCCL2
Intermediate gray layer of the superior colliculusipsiInG0
Superior colliculus medial partipsimSC2
Superior colliculus rostral partipsirSC2
Superior colliculus rostrocaudal partipsiSCrc2
Central tegmental field dorsal partipsiTGACd1
Midline ventral tegmental nucleusipsiMVTA3
Rostromedial tegmental nucleusipsiRMTg1
Subpeduncular tegmental nucleusipsiSPTg2
Substantia nigra A9ipsiSN2
Substantia nigra A9 dorsolateral partipsiSNdL-0.5
Substantia nigra caudal partipsiSNcp-0.5
Ventral tegmental area A10ipsiVTA1
Interfascicular nucleusipsiIF0
Caudal linear nucleus of the rapheipsiCLi1
Lateral tegmental areaipsiLTGA-0.5
Laterodorsal tegmental nucleusipsiLDTg4
Ventral tegmental nucleusipsiVTg4
Dorsal tegmental nucleusipsiDTg3
Dorsal tegmental nucleus central partipsiDTgC1
Dorsal tegmental nucleus ventromedial partipsiDTgVM1
Pedunculopontine tegmental nucleusipsiPPTg3
Edinger Westphal nucleusipsiEW0
Cerebellar cortexipsiCERC1
Cerebellar cortex intermediate partipsiCERCim2
Lateral part of the cerebellar cortexipsiCERCL2
ParaflocculusipsiPFl1
Lateral part of the dorsal paraflocculusipsiDPFlL-0.5
Medial dorsal paraflocculusipsiDPFlM-0.5
Centromedial dorsal paraflocculusipsiDPFlCM-0.5
Centrolateral dorsal paraflocculusipsiDPFlCL-0.5
Rostromedial dorsal paraflocculusipsiDPFlRM-0.5
Rostrocentral dorsal paraflocculusipsiDPFlRC-0.5
Rostrolateral dorsal paraflocculusipsiDPFlRL0
Caudolateral dorsal paraflocculusipsiDPFlCaL0
Paraflocculus ventral partipsiPFlv2
Lateral part of the ventral paraflocculusipsiPFlvL-0.5
Medial ventral paraflocculusipsiPFlvM-0.5
Central ventral paraflocculusipsiPFlvCe-0.5
Rostrolateral paraflocculus ventral partipsiPFlvRL-0.5
Ansiform lobuleipsiAnsiL1
Ansiform lobule crus 1ipsiCrus11
Ansiform lobule crus 2ipsiCrus21
Paramedian lobuleipsiPM1
C1-zoneipsiC1ZO1
Intermediate part of the paramedian lobuleipsiiPML-0.5
Copula of the pyramisipsiCop1
Simple lobuleipsiSim1
Simple lobule C1 zoneipsiSimC13
Cerebellar lobule 9ipsiCERL93
Cerebellar lobule 10ipsiCERL103
Cerebellar lobule 10 medial partipsiCERL10Me0.5
Intermediate part of nodulusipsiCERL10im0.5
Cerebellar lobule 6ipsiCERL61
Medial cerebellar cortexipsiCERCM2
Cerebellar nucleiipsiDCeN1
Dorsolateral humpipsiCERcndl3
Interposed cerebellar nucleiipsiICN2
Anterior interposed nucleusipsiAIN-0.5
Anterior interposed nucleus lateral partipsiAINL-0.5
Central interposed cerebellar nuclei medial partipsiICNCeM1
Central interposed cerebellar nuclei lateral partipsiICNCeL0
Lateral part of interposed cerebellar nuclei rostral partipsiICNRoL0
Medial part of the interposed cerebellar nuclei rostral partipsiICNRM1
Posterior interposed nucleusipsiCERpin2
Posterior interposed nucleus caudolateralipsiCERpinCL1
Posterior interposed nucleus ventral partipsiCERpinV-0.5
Lateral cerebellar nucleusipsiCERL2
Lateral cerebellar nucleus parvicellular partipsiLatPC2
Lateral cerebellar nucleus dorsolateral magnocellular portionipsiCERLdl3
Lateral cerebellar nucleus rostrocaudal columnipsiCERLrcc1
Lateral cerebellar nucleus lateroventral partipsiCERLLv1
Medial cerebellar nucleusipsiMed2
Medial cerebellar nucleus caudal partipsiMedc-0.5
Medial cerebellar nucleus caudalmedial partipsiMedCM1
Medial cerebellar nucleus middle subdivisionipsiMMCM1
Dorsolateral protuberanceipsiDLPr1
FlocculusipsiFl2
Medial part of the flocculusipsiFlM-0.5
Rostrocentral flocculusipsiFlRC-0.5
Ventrolateral flocculusipsiFlVL-0.5
Rostromedial flocculusipsiFlRM-0.5
Rostrodorsal flocculusipsiFlRD-0.5
Dorsolateral flocculusipsiFlDL-0.5
Rostroventral flocculusipsiFlRV-0.5
Caudolateral flocculusipsiFlCaL-0.5
Dorsocentral flocculusipsiFlDC-0.5
Caudodorsomedial flocculusipsiFlCDM-0.5
Rostroventromedial flocculusipsiFlRVM0
Rostrodorsomedial flocculusipsiFlRDM0
Intermediate interstitial nucleus of the medial longitudinal fasciculusipsiII3
Locus coeruleusipsiLC4
Locus coeruleus caudal partipsiLCca1
Locus coeruleus rostral partipsiLCRo0
Pericoerulear regionipsiPCR2
Reticulotegmental nucleus of the ponsipsiRtTg3
Pontine nucleiipsiPn-0.5
Prepositus nucleusipsiPr3
Reticular systemipsiRF-1
Rostroventrolateral reticular nucleusipsiRVL0
Mesencephalic reticular formationipsiMRF1
Deep mesencephalic nucleusipsiDpMe3
Pontine reticular nucleusipsiPRN3
Pontine reticular nucleus oral partipsiPnO3
Pontine reticular nucleus caudal partipsiPNC-0.5
Parabrachial nucleusipsiPB-0.5
Lateral parabrachial nucleusipsiLPB3
Parabrachial nucleus central lateral partipsiPBCeL-0.5
Parabrachial nucleus medialipsiPBnMe1
Central part of the medial parabrachial nucleusipsiPBnCMe-0.5
Parabrachial nucleus ventrolateral partipsiPBveLa-0.5
Ventromedial aspect of the parabrachial nucleusipsiPBvm-0.5
Gigantocellular reticular nucleusipsiGi3
Gigantocellular reticular nucleus alpha partipsiGiA3
Gigantocellular reticular nucleus ventral partipsiGiV3
Lateral reticular nucleusipsiLRt1
Medullary reticular nucleusipsiMdD1
Parvicellular reticular nucleusipsiPCRt1.5
Supragenual nucleusipsiSGe1
Ambiguus nucleus rostral partipsiAmbR-0.5
Boetzinger complexipsiBo3
Abducens nucleusipsi62
Paraabducens nucleusipsiPa62
Facial nucleusipsi71
Facial nucleus lateral subnucleusipsi7L1.5
Hypoglossal nucleusipsi12S3
Hypoglossal motor nucleusipsi12M1
Supratrigeminal nucleusipsiSu5-0.5
Mesencephalic trigeminal nucleusipsiMe52
Mesencephalic trigeminal nucleus medial partipsiperiMe50.5
Mesencephalic trigeminal nucleus caudal poleipsiMe5cp1
Motor trigeminal nucleusipsiMo51
Motor trigeminal nucleus dorsolateral partipsiMo5DL3
Motor trigeminal nucleus group kipsiMo5gK1
Motor trigeminal nucleus ventromedial partipsiMo5VM3
Principal sensory trigeminal nucleusipsiPr52
Spinal trigeminal nucleus caudal partipsiSp5C2
Spinal trigeminal nucleus interpolar partipsiSp5I2
Spinal trigeminal nucleus oral partipsiSp5O2
Paratrochlear nucleusipsiPa42
Trochlear nucleusipsi42
CochleaipsiCO-0.5
Nucleus of origin of efferents of the vestibular nerveipsiEVe0
Spinal vestibular nucleusipsiSpVe1
Vestibular nucleiipsiVnc1
Vestibular nuclei ventromedial partipsiVncVM2
Superior vestibular nucleusipsiSuVe2
Medial vestibular nucleusipsiMVe3
Lateral vestibular nucleusipsiLVe1
Vestibular ductsipsivd1
Nucleus of the solitary tract rostral partipsiSolro0
Dorsal motor nucleus of vagusipsi101
Dorsal raphe nucleusipsiDR4
Ventral part of the central dorsal raphe nucleusipsiDRvcep3
Dorsal raphe nucleus lateral wingipsiDRlw1
Dorsal raphe nucleus median partipsiDRM1
Dorsal raphe nucleus caudal midlineipsiDRcmip-0.5
Median raphe nucleusipsiMnR1
Raphe magnus nucleusipsiRMg3
Dorsal column nucleiipsiDCN3
Nucleus of RolleripsiRo1
Olivary nucleusipsiON1
Inferior oliveipsiIO2
Inferior olive cap of Kooy of the medial nucleusipsiIOK3
Dorsal paragigantocellular nucleusipsiDPGi3
Lateral paragigantocellular nucleusipsiLPGi0.5
Retrotrapezoid nucleusipsiRTN2
Superior salivatory nucleusipsiSuS3
Nucleus of the horizontal limb of the diagonal bandipsiHDB1
Medial septal nucleusipsiMS0
Basal nucleus MeynertipsiB1
Lateral preoptic areaipsiLPO1
Lateral preoptic nucleusipsiLPN0.5
Magnocellular preoptic nucleusipsiMCPO1
Tuberomammillary nucleus dorsomedial partipsiTBMdm1
Ventral tuberomammillary nucleusipsiVTM1
Glia limitans ventral to the ventral tuberomammillary nucleusipsiTuMgL1
HypothalamusipsiHYPO1
Dorsomedial hypothalamic nucleusipsiDMHy1
Lateral zoneipsiLHA2
Lateral hypothalamic areaipsiLH3
Ventral perifornical lateral hypothalamusipsiPFxV-0.5
Lateral hypothalamic nucleusipsiLHN0.5
Lateral hypothalamus adjacent to the ventral tuberomammillary nucleusipsiLHVTM1
Medial division of the hypothalamusipsiMdH1
Dorsomedial nucleus posterior partipsiDMHp1
Ventromedial hypothalamic nucleusipsiVMH3
Periventricular zoneipsiPVZ-0.5
Lateral mammillary nucleusipsiLM1
Premammillary nucleus dorsal partipsiPMD1
Premammillary nucleus ventromedial partipsiPMvm1
Supramammillar nucleus lateral partipsiSuML1
Centre median nucleusipsiCeMe-0.5
Centrolateral thalamic nucleusipsiCL3
Parafascicular thalamic nucleusipsiPF3
Rhomboid thalamic nucleusipsiRh-0.5
Mediodorsal thalamic nucleus central partipsiMDC2
Mediodorsal thalamic nucleus lateral partipsiMDL2
Mediodorsal thalamic nucleus medial partipsiMDM3
Reuniens thalamic nucleusipsiRe-0.5
Ventrolateral thalamic nucleusipsiVL3
Ventral posterior thalamic complex medial partipsiVPTm2
Rostral half of the ventral posterior thalamic complex medial partipsiVPTmrh2
Ventrobasal complexipsiVB-0.5
Reticular thalamic nucleusipsiRt-0.5
Subparafascicular thalamic nucleus rostral partipsiSPFr1
Ventral thalamus dorsomedial partipsiVNTdm2
Zona incertaipsiZI3
Lateral habenular nucleusipsiLHb1
Medial forebrain bundleipsimfb-0.5
Bed nucleus of the stria terminalis dorsolateral partipsiBSTDL3
Lateral capsular subdivision of the central nucleus of the amygdalaipsiCeLac3
Central amygdaloid nucleus lateral divisionipsiCeL3
Intercalated cell chain between Ce BL LAipsiIMcc3
Intercalated masses between intermediate and external fiber capsulesipsiIMie-0.5
Intercalated masses dorsal to the rostral pole of CeipsiIMdr-0.5
Intercalated masses ventral and dorsal to posterior limb of the anterior commissureipsiIMvd-0.5
Basal gangliaipsiBG-0.5
Globus pallidusipsiGP1
Medial globus pallidusipsiMGP2
Ventral pallidumipsiVP1
Caudate putamenipsiCPu2
Subthalamic nucleusipsiSTh2
Cerebral cortexipsiCEC0
HippocampusipsiHIPP1
Retrosplenial agranular cortexipsiRSA0
Cingulate cortexipsiCg0
Frontal association cortexipsiFrA0
Parietal association cortexipsiPtA0
Hindlimb motor cortexipsiHMCx0
Visual regionsipsiVR0
Nucleus of the posterior commissureipsiPCom1
Precommissural nucleusipsiPrC0
Ventral lateral geniculate nucleusipsiVLG-0.5
Interpeduncular nucleus apical subnucleusipsiIPA1
Interpeduncular nucleus caudal subnucleusipsiIPC1
Interpeduncular nucleus central subnucleusipsiIPRc1
Interpeduncular nucleus dorsal subnucleusipsiIPRd1
Interpeduncular nucleus intermediate subnucleusipsiIPI1
Interpeduncular nucleus lateral subnucleusipsiIPL1
Olfactory tubercleipsiTuO0
Spinal cordipsiMES-0.5
Cervical segmentsipsiCSeg-0.5
Cervical segment 1ipsiCS12
Spinal cord layer 7 C1ipsiSCL7C13
Spinal cord layer 8 C1ipsiSCL8C13
Spinal cord layer 9 C1ipsiSCL9C13
Cervical segment 2ipsiCS22
Spinal cord layers C2ipsiSCLC22
Spinal cord layer 7 C2ipsiSCL7C23
Spinal cord layer 8 C2ipsiSCL8C23
Spinal cord layer 9 C2ipsiSCL9C23
Cervical segment 3ipsiCS32
Spinal cord layer 7 C3ipsiSCL7C33
Spinal cord layer 8 C3ipsiSCL8C33
Spinal cord layer 9 C3ipsiSCL9C33
Spinal cord layer 7 C4ipsiSCL7C43
Spinal cord layer 8 C4ipsiSCL8C43
Phrenic motoneurons of lamina 9 C4ipsiPh9C41
Spinal cord layer 9 C4ipsiSCL9C43
Cervical segment 5ipsiCS5-0.5
Spinal cord layer 7 C5ipsiSCL7C53
Spinal cord layer 8 C5ipsiSCL8C53
Spinal cord layer 9 C5ipsiSCL9C53
Cervical segment 6ipsiCS6-0.5
Spinal cord layer 7 C6ipsiSCL7C63
Spinal cord layer 8 C6ipsiSCL8C63
Spinal cord layer 9 C6ipsiSCL9C63
Cervical segment 7ipsiCS7-1
Spinal cord layer 7 C7ipsiSCL7C73
Spinal cord layer 8 C7ipsiSCL8C73
Spinal cord layer 9 C7ipsiSCL9C73
Spinal cord layer 7 C8ipsiSCL7C83
Spinal cord layer 8 C8ipsiSCL8C83
Spinal cord layer 9 C8ipsiSCL9C83
Intermediolateral cell column T1ipsiIMLT1-0.5
Spinal cord layer 7 T1ipsiSCL7T13
Spinal cord layer 8 T1ipsiSCL8T13
Spinal cord layer 9 T1ipsiSCL9T13
Intermediolateral cell column T2ipsiIMLT2-0.5
Spinal cord layer 7 T2ipsiSCL7T23
Spinal cord layer 8 T2ipsiSCL8T23
Spinal cord layer 9 T2ipsiSCL9T23
Intermediolateral cell column T3ipsiIMLT3-0.5
Spinal cord layer 7 T3ipsiSCL7T33
Spinal cord layer 8 T3ipsiSCL8T33
Spinal cord layer 9 T3ipsiSCL9T33
Intermediolateral cell column T4ipsiIMLT4-0.5
Spinal cord layer 7 T4ipsiSCL7T43
Spinal cord layer 8 T4ipsiSCL8T43
Spinal cord layer 9 T4ipsiSCL9T43
Thoracal segment 5ipsiT52
Intermediolateral cell column T5ipsiIMLT5-0.5
Spinal cord layer 7 T5ipsiSCL7T53
Spinal cord layer 8 T5ipsiSCL8T53
Spinal cord layer 9 T5ipsiSCL9T53
Thoracal segment 6ipsiT62
Spinal cord layer 7 T6ipsiSCL7T63
Spinal cord layer 8 T6ipsiSCL8T63
Spinal cord layer 9 T6ipsiSCL9T63
Thoracal segment 7ipsiT72
Spinal cord layer 7 T7ipsiSCL7T73
Spinal cord layer 8 T7ipsiSCL8T73
Spinal cord layer 9 T7ipsiSCL9T73
Thoracal segment 8ipsiT82
Spinal cord layer 7 T8ipsiSCL7T83
Spinal cord layer 8 T8ipsiSCL8T83
Spinal cord layer 9 T8ipsiSCL9T83
Thoracal segment 9ipsiT92
Spinal cord layer 7 T9ipsiSCL7T93
Spinal cord layer 8 T9ipsiSCL8T93
Spinal cord layer 9 T9ipsiSCL9T93
Spinal cord layers T10ipsiSCLT102
Spinal cord layer 7 T10ipsiSCL7T103
Spinal cord layer 8 T10ipsiSCL8T103
Spinal cord layer 9 T10ipsiSCL9T103
Spinal cord layer 7 T11ipsiSCL7T113
Spinal cord layer 8 T11ipsiSCL8T113
Spinal cord layer 9 T11ipsiSCL9T113
Spinal cord layer 7 T12ipsiSCL7T123
Spinal cord layer 8 T12ipsiSCL8T123
Spinal cord layer 9 T12ipsiSCL9T123
Spinal cord layer 7 T13ipsiSCL7T133
Spinal cord layer 8 T13ipsiSCL8T133
Spinal cord layer 9 T13ipsiSCL9T133
Lumbar enlargementipsiLSegE1
Lumbar segment 1ipsiL13
Spinal cord layer 7 L1ipsiSCL7L13
Spinal cord layer 8 L1ipsiSCL8L13
Spinal cord layer 9 L1ipsiSCL9L13
Lumbar segment 2ipsiL23
Spinal cord layer 7 L2ipsiSCL7L23
Spinal cord layer 8 L2ipsiSCL8L23
Spinal cord layer 9 L2ipsiSCL9L23
Lumbar segment 3ipsiL33
Spinal cord layer 7 L3ipsiSCL7L33
Spinal cord layer 8 L3ipsiSCL8L33
Spinal cord layer 9 L3ipsiSCL9L33
Lumbar segment 4ipsiL43
Spinal cord layer 7 L4ipsiSCL7L43
Spinal cord layer 8 L4ipsiSCL8L43
Spinal cord layer 9 L4ipsiSCL9L43
Lumbar segment 5ipsiL53
Area X L5ipsiSCL10L51
Spinal cord layer 7 L5ipsiSCL7L53
Spinal cord layer 8 L5ipsiSCL8L53
Spinal cord layer 9 L5ipsiSCL9L53
Spinal nucleus of the bulbocavernosus lumbal segment 5ipsiBCL53
Lumbar segment 6ipsiL63
Lumbar parasympathetic nucleus L6ipsiLPSyL6-0.5
Spinal cord layer 7 L6ipsiSCL7L63
Spinal cord layer 8 L6ipsiSCL8L63
Spinal cord layer 9 L6ipsiSCL9L63
Spinal nucleus of the bulbocavernosus lumbal segment 6ipsiBCL63
Sacral parasympathetic nucleus S1ipsiSPSyS1-0.5
Spinal cord layer 7 S1ipsiSCL7S13
Spinal cord layer 8 S1ipsiSCL8S13
Spinal cord layer 9 S1ipsiSCL9S13
Spinal cord layer 7 S2ipsiSCL7S23
Spinal cord layer 8 S2ipsiSCL8S23
Spinal cord layer 9 S2ipsiSCL9S23
Spinal cord layer 7 S3ipsiSCL7S33
Spinal cord layer 8 S3ipsiSCL8S33
Spinal cord layer 9 S3ipsiSCL9S33
Spinal cord layer 7 S4ipsiSCL7S43
Spinal cord layer 8 S4ipsiSCL8S43
Spinal cord layer 9 S4ipsiSCL9S43
Central graycontraCG0
Central gray mesencephalic part intercollicular levelcontraCGMint-0.5
Nuclei of the lateral lemniscuscontraNLL2
Nucleus of DarkschewitschcontraDk0
Oculomotor nucleuscontra30
Oculomotor nucleus parvicellular partcontra3PC0
Medial accessory oculomotor nucleuscontraMA31
Rostral interstitial nucleus of medial longitudinal fasciculuscontraRI0
Periaqueductal graycontraPAG-0.5
Ventrolateral periaqueductal graycontraVLPAG3
Red nucleuscontraR0.5
Prerubral fieldcontraPR1
Red nucleus caudal partcontraRnCa-0.5
Red nucleus medial partcontraRmed-0.5
Superior colliculuscontraSC3
Central gray of the superior colliculuscontracgSC3
Superior colliculus caudolateral partcontraSCCL3
Intermediate gray layer of the superior colliculuscontraInG0
Superior colliculus medial partcontramSC3
Superior colliculus rostral partcontrarSC3
Superior colliculus rostrocaudal partcontraSCrc3
Central tegmental field dorsal partcontraTGACd1
Subpeduncular tegmental nucleuscontraSPTg1
Substantia nigra A9contraSN0.5
Laterodorsal tegmental nucleuscontraLDTg4
Ventral tegmental nucleuscontraVTg2
Dorsal tegmental nucleuscontraDTg1.5
Pedunculopontine tegmental nucleuscontraPPTg3
Edinger Westphal nucleuscontraEW0
Cerebellar cortexcontraCERC2
Cerebellar cortex intermediate partcontraCERCim2
Lateral part of the cerebellar cortexcontraCERCL3
Lateral part of the dorsal paraflocculuscontraDPFlL-0.5
Medial dorsal paraflocculuscontraDPFlM-0.5
Centromedial dorsal paraflocculuscontraDPFlCM-0.5
Centrolateral dorsal paraflocculuscontraDPFlCL-0.5
Rostromedial dorsal paraflocculuscontraDPFlRM-0.5
Rostrocentral dorsal paraflocculuscontraDPFlRC-0.5
Rostrolateral dorsal paraflocculuscontraDPFlRL0
Caudolateral dorsal paraflocculuscontraDPFlCaL0
Paraflocculus ventral partcontraPFlv1
Lateral part of the ventral paraflocculuscontraPFlvL-0.5
Medial ventral paraflocculuscontraPFlvM-0.5
Central ventral paraflocculuscontraPFlvCe-0.5
Rostrolateral paraflocculus ventral partcontraPFlvRL-0.5
C1-zonecontraC1ZO3
Simple lobule C1 zonecontraSimC13
Cerebellar lobule 10 medial partcontraCERL10Me0.5
Intermediate part of noduluscontraCERL10im0.5
Medial cerebellar cortexcontraCERCM2
Cerebellar nucleicontraDCeN1
Dorsolateral humpcontraCERcndl4
Interposed cerebellar nucleicontraICN2
Anterior interposed nucleuscontraAIN-0.5
Anterior interposed nucleus lateral partcontraAINL-0.5
Central interposed cerebellar nuclei medial partcontraICNCeM1
Central interposed cerebellar nuclei lateral partcontraICNCeL0
Lateral part of interposed cerebellar nuclei rostral partcontraICNRoL0
Medial part of the interposed cerebellar nuclei rostral partcontraICNRM1
Posterior interposed nucleuscontraCERpin2
Posterior interposed nucleus caudolateralcontraCERpinCL1
Posterior interposed nucleus ventral partcontraCERpinV-0.5
Lateral cerebellar nucleuscontraCERL2
Lateral cerebellar nucleus parvicellular partcontraLatPC4
Lateral cerebellar nucleus dorsolateral magnocellular portioncontraCERLdl4
Lateral cerebellar nucleus rostrocaudal columncontraCERLrcc1
Lateral cerebellar nucleus lateroventral partcontraCERLLv1
Medial cerebellar nucleuscontraMed2
Medial cerebellar nucleus caudal partcontraMedc-0.5
Medial cerebellar nucleus caudalmedial partcontraMedCM2
Medial cerebellar nucleus middle subdivisioncontraMMCM2
Dorsolateral protuberancecontraDLPr2
FlocculuscontraFl0.5
Medial part of the flocculuscontraFlM-0.5
Rostrocentral flocculuscontraFlRC-0.5
Ventrolateral flocculuscontraFlVL-0.5
Rostromedial flocculuscontraFlRM-0.5
Rostrodorsal flocculuscontraFlRD-0.5
Dorsolateral flocculuscontraFlDL-0.5
Rostroventral flocculuscontraFlRV-0.5
Caudolateral flocculuscontraFlCaL-0.5
Dorsocentral flocculuscontraFlDC-0.5
Caudodorsomedial flocculuscontraFlCDM-0.5
Rostroventromedial flocculuscontraFlRVM-0.5
Rostrodorsomedial flocculuscontraFlRDM-0.5
Intermediate interstitial nucleus of the medial longitudinal fasciculuscontraII1
Locus coeruleuscontraLC2
Reticulotegmental nucleus of the ponscontraRtTg1
Prepositus nucleuscontraPr1
Reticular systemcontraRF3
Rostroventrolateral reticular nucleuscontraRVL0
Deep mesencephalic nucleuscontraDpMe1
Pontine reticular nucleuscontraPRN3
Pontine reticular nucleus oral partcontraPnO3
Pontine reticular nucleus caudal partcontraPNC3
Lateral parabrachial nucleuscontraLPB1.5
Parabrachial nucleus medialcontraPBnMe0.5
Gigantocellular reticular nucleuscontraGi3
Gigantocellular reticular nucleus alpha partcontraGiA3
Gigantocellular reticular nucleus ventral partcontraGiV3
Medullary reticular nucleuscontraMdD1
Parvicellular reticular nucleuscontraPCRt1
Ambiguus nucleus rostral partcontraAmbR-0.5
Abducens nucleuscontra60
Paraabducens nucleuscontraPa60
Facial nucleuscontra7-0.5
Facial nucleus lateral subnucleuscontra7L1.5
Hypoglossal nucleuscontra12S1
Hypoglossal motor nucleuscontra12M-0.5
Motor trigeminal nucleuscontraMo52
Motor trigeminal nucleus dorsolateral partcontraMo5DL1
Motor trigeminal nucleus ventromedial partcontraMo5VM1
Paratrochlear nucleuscontraPa40.5
Trochlear nucleuscontra40
CochleacontraCO-0.5
Spinal vestibular nucleuscontraSpVe0
Vestibular nuclei ventromedial partcontraVncVM1
Superior vestibular nucleuscontraSuVe1
Medial vestibular nucleuscontraMVe1
Lateral vestibular nucleuscontraLVe0
Dorsal raphe nucleuscontraDR1
Dorsal raphe nucleus caudal midlinecontraDRcmip-0.5
Raphe magnus nucleuscontraRMg3
Nucleus of RollercontraRo0
Inferior olivecontraIO0
Dorsal paragigantocellular nucleuscontraDPGi2
Lateral paragigantocellular nucleuscontraLPGi0.5
Superior salivatory nucleuscontraSuS2
Lateral preoptic areacontraLPO0
Tuberomammillary nucleus dorsomedial partcontraTBMdm-0.5
Ventral tuberomammillary nucleuscontraVTM-0.5
Glia limitans ventral to the ventral tuberomammillary nucleuscontraTuMgL-0.5
HypothalamuscontraHYPO0
Dorsomedial hypothalamic nucleuscontraDMHy-0.5
Lateral zonecontraLHA-0.5
Lateral hypothalamic areacontraLH3
Lateral hypothalamus adjacent to the ventral tuberomammillary nucleuscontraLHVTM-0.5
Dorsomedial nucleus posterior partcontraDMHp3
Lateral mammillary nucleuscontraLM-0.5
Premammillary nucleus dorsal partcontraPMD-0.5
Premammillary nucleus ventromedial partcontraPMvm-0.5
Supramammillar nucleus lateral partcontraSuML-0.5
Centrolateral thalamic nucleuscontraCL3
Parafascicular thalamic nucleuscontraPF3
Mediodorsal thalamic nucleus central partcontraMDC1
Mediodorsal thalamic nucleus lateral partcontraMDL1
Mediodorsal thalamic nucleus medial partcontraMDM3
Ventral posterior thalamic complex medial partcontraVPTm1
Rostral half of the ventral posterior thalamic complex medial partcontraVPTmrh1
Subparafascicular thalamic nucleus rostral partcontraSPFr0.5
Ventral thalamus dorsomedial partcontraVNTdm2
Zona incertacontraZI2
Lateral habenular nucleuscontraLHb0
Lateral pontine reticulospinal tractcontralprst-2
Retrosplenial agranular cortexcontraRSA0
Cingulate cortexcontraCg0
Frontal association cortexcontraFrA0
Parietal association cortexcontraPtA0
Hindlimb motor cortexcontraHMCx0
Visual regionscontraVR0
Nucleus of the posterior commissurecontraPCom1
Precommissural nucleuscontraPrC0
Ventral lateral geniculate nucleuscontraVLG0
Cervical segmentscontraCSeg-0.5
Cervical segment 1contraCS13
Cervical segment 2contraCS23
Cervical segment 7contraCS7-1
Lumbar parasympathetic nucleus L6contraLPSyL6-0.5
Sacral parasympathetic nucleus S1contraSPSyS1-0.5
Hypoglossal nerveipsi12P-2
TongueipsiOrgOCT-0.5
RectumipsiOrgRec-10
Genioglossus muscleipsiMuscGenioG-0.5
Gastrocnemius muscleipsiMuscGC2
Musculus masseteripsiMuscMass-0.5
Bulbocavernosus muscleipsiMuscBCV-10
Ischiocavernosus muscleipsiMuscicav-10
Posterior cricoarytenoid muscleipsiMuscPCA1
Femoral bone marrowipsiOrgSkFemM1
ClitorisipsiOrgCLi1
Mammary glandipsiOrgMamG3
VaginaipsiOrgVag-10
Epididymis caputipsiOrgEpiCa1
Epididymis caudaipsiOrgEpiCau3
ThymusipsiThym-0.5
Genioglossus musclecontraMuscGenioG-0.5
Musculus massetercontraMuscMass-0.5
Femoral bone marrowcontraOrgSkFemM1
Mammary glandcontraOrgMamG-0.5
ThymuscontraThym-0.5
Pancreas sideipsiOrgsPancs-0.5
Pancreas sidecontraOrgsPancs-0.5

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG3
Central gray lateral ventral partipsiCGVD3
Medial longitudinal fasciculusipsimlf-0.5
Nuclei of the lateral lemniscusipsiNLL2
Nucleus of DarkschewitschipsiDk3
Oculomotor nucleusipsi30
Lateral dorsal border of the oculomotor nucleusipsi3LDB1
Oculomotor nucleus parvicellular partipsi3PC1
Medial accessory oculomotor nucleusipsiMA31
Rostral interstitial nucleus of medial longitudinal fasciculusipsiRI2
Periaqueductal grayipsiPAG1
Dorsal periaqueductal grayipsiDPAG3
Dorsolateral periaqueductal grayipsiDLPAG3
Caudal part of the medial periaqueductal grayipsiPAGmc3
Ventral periaqueductal grayipsiVPAG1
Ventrolateral periaqueductal grayipsiVLPAG3
Ventrolateral periaqueductal gray caudal partipsiPAGvlc-2
Caudal lateral pontine tegmentumipsiCLPTG3
Red nucleusipsiR3
Prerubral fieldipsiPR3
Red nucleus magnocellular partipsiRMC1
Central nucleus of the inferior colliculusipsiCIC-0.5
Superior colliculusipsiSC2
Superior colliculus superficial layers commissural neuronsipsiSCscn-0.5
Superior colliculus intermediate and deep layersipsiSCidLa-0.5
Superior colliculus deep layersipsiSCd-0.5
Tegmental areaipsiTGA-0.5
Surrounding central tegmental fieldipsiTGACsur3
Peduncularpontine nucleusipsiPPN1
Peduncular pontine nucleus lateral partipsiPPNl3
Peduncularpontine nucleus caudal levelsipsiPPNCa-0.5
Pars alpha of the peduncularpontine nucleusipsiPPNa3
Subpeduncular tegmental nucleusipsiSPTg1
Ventral midbrain tegmentumipsiVeMT1
Substantia nigra A9ipsiSN0.5
Substantia nigra A9 dorsocaudal partipsiSNdc0.5
Substantia nigra compact partipsiSNC3
Substantia nigra compact part dorsal surfaceipsiSNCDs-0.5
Substantia nigra compact part lateral part of the dorsal surfaceipsiSNCDLs3
Substantia nigra compact part ventral tieripsiSNCV1
Substantia nigra lateral partipsiSNL3
Substantia nigra reticular partipsiSNR3
Ventral tegmental area A10ipsiVTA1.5
Interfascicular nucleusipsiIF-0.5
Ventral tegmental tailipsiVTTa1
Parabrachial pigmented nucleusipsiPBP3
Peripeduncular nucleusipsiPP3
Transitional region between ventral tegmental area and the medial substantia nigra pars compactaipsiTRVTAmSNC1
Ventrolateral tegmental areaipsiVLTg1
Laterodorsal tegmental nucleusipsiLDTg3
Dorsal tegmental nucleusipsiDTg0
Pedunculopontine tegmental nucleusipsiPPTg3
Edinger Westphal nucleusipsiEW2
Interstitial nucleus of CajalipsiInC3
Deep cerebellar nucleiipsiDNC-0.5
Anterior interposed nucleusipsiAIN3
Anterior interposed nucleus lateral partipsiAINL0.5
Posterior interposed nucleusipsiCERpin0.5
Lateral cerebellar nucleusipsiCERL3
Lateral cerebellar nucleus hilusipsiCERLH0.5
Medial cerebellar nucleusipsiMed1
Fastigial pressure areaipsiFastPress-0.5
Interstitial cell groupsipsiCERIc-0.5
Intermediate interstitial nucleus of the medial longitudinal fasciculusipsiII1
Locus coeruleusipsiLC2
Nucleus incertus pars dissipataipsiNId1
Pons oral partipsiPor3
Reticulotegmental nucleus of the ponsipsiRtTg0
Prepositus nucleusipsiPr3
Intermediate reticular nucleusipsiIRt-0.5
Medial reticular formationipsiRFm-0.5
Rostroventrolateral reticular nucleusipsiRVL1
Mesopontine reticular formationipsiMPRF-0.5
Mesencephalic reticular formationipsiMRF-0.5
Deep mesencephalic nucleusipsiDpMe2
Reticular formation lateral of the median rapheipsiRfMR-0.5
Rostral mesencephalic reticular formationipsiRMRf2
Pontine reticular nucleusipsiPRN3
Pontine reticular nucleus oral partipsiPnO0
Pontine reticular nucleus oral part lateral partipsiPnOL-0.5
Pontine reticular nucleus caudal partipsiPNC2
Peribrachial regionipsiPBR2
Cuneiforme nucleus caudal partipsiCnFc-0.5
Cuneiforme nucleus dorsal partipsiCnFD-0.5
Parabrachial nucleusipsiPB2
Koelliker Fuse nucleusipsiKF-2
Lateral parabrachial nucleusipsiLPB1
Lateral edge of the central lateral parabrachial nucleusipsiPBCeLe-2
Parabrachial nucleus external divison lateral partipsiPBeDL-2
Parabrachial nucleus medialipsiPBnMe1
Medial parabrachial nucleus external partipsiMPBE-2
Gigantocellular reticular nucleusipsiGi1
Medullary reticular nucleusipsiMdD1
Subnucleus reticularis dorsalisipsiSRD-0.5
Medial medullary reticular nucleusipsiMMdD0.5
Medullary reticular nucleus rostral partipsiMdDR-0.5
Parvicellular reticular nucleusipsiPCRt2
Medulla oblongataipsiMeOb-0.5
Abducens nucleusipsi60
Paraabducens nucleusipsiPa61
Area dorsal to trigeminal nucleusipsiADT-0.5
Supratrigeminal nucleusipsiSu5-0.5
Mesencephalic trigeminal nucleusipsiMe5-0.5
Motor trigeminal nucleusipsiMo50
Principal sensory trigeminal nucleusipsiPr51
Principal sensory trigeminal nucleus dorsal partipsiPr5D-2
Spinal trigeminal nucleus caudal part ventral part layer 4ipsiSp5CVL4-0.5
Spinal trigeminal nucleus caudal part ventral part layer 5ipsiSp5CVL5-0.5
Spinal trigeminal nucleus caudal part ventral part layer 3ipsiSp5CVL3-0.5
Spinal trigeminal nucleus caudal part ventral part layer 1ipsiSp5CVL1-0.5
Spinal trigeminal nucleus caudal part ventral part layer 2ipsiSp5CVL2-0.5
Paratrochlear nucleusipsiPa41
Trochlear nucleusipsi40
Cochlear nucleusipsiCON1
Cochlear root neuronsipsiCORN-3
Spinal vestibular nucleusipsiSpVe1
Vestibular nucleiipsiVnc3
Vestibular nuclei ventromedial partipsiVncVM2
Superior vestibular nucleusipsiSuVe3
Medial vestibular nucleusipsiMVe2
Lateral vestibular nucleusipsiLVe3
11 beta hydroxysteroiddehydrogenase type-2 cellsipsiSolHSD20
Caudal nucleus of the solitary tract medial partipsiSolcame2
Nucleus of the solitary tract medial partipsiSolM-2
Raphe nucleiipsiRAN-0.5
Dorsal raphe nucleusipsiDR3
Dorsal raphe nucleus caudal partipsiDRC2.5
Dorsal raphe nucleus dorsomedial subdivisionipsiDRdm2.5
Dorsal raphe nucleus rostral partipsiDRr2.5
Medial raphe nucleusipsiMeR-0.5
Superior central raphe nucleusipsiCS1
Raphe magnus nucleusipsiRMg0
Raphe magnus nucleus caudal partipsiRMgc-0.5
Raphe obscurus nucleus rostral partipsiRObr-0.5
Raphe pallidus nucleusipsiRPa-0.5
A1 noradrenergic cellsipsiA1-0.5
Dorsal column nucleiipsiDCN-0.5
Nucleus of RolleripsiRo0.5
Inferior oliveipsiIO0
Dorsal paragigantocellular nucleusipsiDPGi2
Lateral paragigantocellular nucleusipsiLPGi-0.5
Rostral part of the ventromedial medulla oblongataipsiRMeObvm3
Basal nucleus MeynertipsiB-0.5
Basal nucleus Meynert caudal partipsiBca-0.5
Substantia innominataipsiSI3
Substantia innominata lateral partipsiSIl3
Lateral preoptic areaipsiLPO3
Medial preoptic areaipsiMPA0.5
Medial preoptic area dorsolateral partipsiMPADL1
Lateral preoptic nucleusipsiLPN-0.5
Magnocellular preoptic nucleusipsiMCPO3
Medial preoptic nucleusipsiMPO-0.5
Median preoptic nucleusipsiMnPO3
Tuberomammillary nucleusipsiTuM2
DiencephalonipsiDEC-0.5
HypothalamusipsiHYPO3
Dorsomedial hypothalamic nucleusipsiDMHy1
Dorsomedial hypothalamic nucleus large-celled loosely packed portionipsiDMHyLC-0.5
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area perifornical partipsiPFx1
Ventral perifornical lateral hypothalamusipsiPFxV3
Lateral hypothalamic area posterior partipsiLHAp-0.5
Tuberal region of lateral hypothalamusipsiTuLH3
Tuberal nucleusipsiTU1
Anteroventral periventricular nucleus lateral borderipsiAVPeL1
Anterior hypothalamic nucleusipsiAHn1
Dorsal hypothalamic areaipsiDA-0.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM1
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM1
Medial mammillary nucleus 2ipsiMM2-0.5
Parastriatal nucleusipsiPS1
Posterior hypothalamic areaipsiPHA1
Posterior hypothalamic nucleusipsiPH-0.5
Ventromedial hypothalamic nucleus central partipsiVMHC1
Ventromedial hypothalamic nucleus dorsomedial partipsiVMHDM1
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL1
Arcuate nucleusipsiArc1
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]ipsiPaMP3
Paraventricular hypothalamic nucleusipsiPa3
Paraventricular nucleus lateral parvocellular partipsiPaLp3
Incerto hypothalamic areaipsiicHYPO-0.5
Lateral mammillary nucleusipsiLM1
Medial mammillary nucleus dorsomedial partipsiMMdm-0.5
Medial mammillary nucleus lateral partipsiML-0.5
Medial mammillary nucleus medial partipsiMM-0.5
Lateral part of pars medialis of the medial mammillary nucleusipsiMLM-0.5
Medial mammillary nucleus median partipsiMMnm-0.5
Medial mammillary nucleus posterior partipsiMMNp0.5
Supramammillar nucleusipsiSuM-0.5
A8 dopamine cells retrorubral groupipsiRRF3
Retrochiasmatic areaipsiRCh1
Centrolateral thalamic nucleusipsiCL0
Parafascicular thalamic nucleusipsiPF2
Parafascicular thalamic nucleus lateral partipsiPFL2
Parafascicular thalamic nucleus prerubral partipsiPFPR-0.5
Parafascicular thalamic nucleus ventrolateral partipsiPFvl-0.5
Subfascicular nucleusipsiSFN3
Ventral posterior thalamic complex medial partipsiVPTm-0.5
Reticular thalamic nucleusipsiRt2
Subparafascicular thalamic nucleus parvicellular partipsiSPFp2
Zona incertaipsiZI3
Forel field H1ipsiFFH1-0.5
Forel field H2ipsiFFH2-0.5
Zona incerta dorsal partipsiZID4
Rostrocaudal part of the dorsal zona incertaipsiZIrcD4
Zona incerta ventral partipsiZIV-0.5
Nucleus of the optic tractipsiOT1
Dorsal part of the rostromedial nucleus of the optic tractipsiDRMOT-0.5
HabenulaipsiHAB3
Lateral habenular nucleusipsiLHb3
Centrolateral part of the lateral habenular nucleusipsiLHbcL3
Pretectal regionipsiPRT-0.5
Anterior pretectal nucleusipsiAPT-0.5
Medial lemniscusipsiml0
Dorsal medial lemniscusipsidml3
Ventral to the medial lemniscusipsivml1
TelencephalonipsiTEL-0.5
Medial terminal nucleus of the accessory optic tractipsiMT-2
Amygdaloid complexipsiAC-0.5
Bed nucleus of the stria terminalisipsiBST3
Bed nucleus of the stria terminalis anterior lateral areaipsiBSTAL3
Bed nucleus of the stria terminalis anterior medial partipsiBSTAM0.5
Bed nucleus of the stria terminalis dorsolateral partipsiBSTDL3
Bed nucleus of the stria terminalis lateral division ventral partipsiBSTLV3
Bed nucleus of the stria terminalis posterolateral partipsiBSTPL3
Bed nucleus of the stria terminalis preoptic partipsiBSTPO3
Bed nucleus of the stria terminalis ventral tipipsiBNSTvt1
Central amygdaloid nucleusipsiCe3
Central amygdaloid nucleus lateral divisionipsiCeL2.5
Central amygdaloid nucleus lateral division medial partipsiCeLm2.5
Central amygdaloid nucleus medial divisionipsiCeM3
Central amygdaloid nucleus ventral partipsiCeV2
Anterior amygdaloid areaipsiAA3
Intercalated cell chain between Ce BL LAipsiIMcc3
Intercalated masses between intermediate and external fiber capsulesipsiIMie-0.5
Intercalated masses dorsal to the rostral pole of CeipsiIMdr-0.5
Intercalated masses ventral and dorsal to posterior limb of the anterior commissureipsiIMvd-0.5
Caudal part of claustrumipsiCCl3
Medial globus pallidusipsiMGP3
Ventral pallidumipsiVP-0.5
HippocampusipsiHIPP0
Retrosplenial agranular cortexipsiRSA1
Area 29dipsiA29d2
Retrosplenial granular cortex c regionipsiRSGc2
Cingulate cortexipsiCg3
Cingulate cortex area 1 caudal partipsiCg1c1
Cingulate cortex area 2ipsiCg21
Cingulate cortex area 2 caudal partipsiCg2c1
Area 24aipsiA24a2
Area 24bipsiA24b1
Dorsal anterior cingulate cortexipsiDACC1
Cingulumipsicg-0.5
Rostral part of the cingulate cortexipsiRCg-0.5
Prelimbic cortexipsiPrL1
Prelimbic cortex dorsal partipsiPrLd1
Prelimbic cortex ventral partipsiPrLv1
Infralimbic cortexipsiIL1
Infralimbic cortex layer 5 caudal halfipsiILL5ch3
Frontal association cortexipsiFrA3
Frontal cortex area 1ipsiFr12
Frontal cortex area 2ipsiFr23
Parietal association cortexipsiPtA1
Parietal cortex area 1ipsiPar11
Insular cortexipsiICX3
Agranular insular cortex caudal part layer 5ipsiAICL53
Agranular insular cortex dorsal partipsiAID3
Dysgranular insular cortex layer 5ipsiDIL53
Granular insular cortexipsiGI-0.5
Perirhinal cortexipsiA351
Prefrontal cortexipsiPFC3
Motoric regionsipsiM3
Lateral agranular prefrontal cortexipsiAGl1
Forelimb motor cortexipsiFMCx1
Hindlimb motor cortexipsiHMCx1
Rostral part of lateral agranular prefrontal cortex layer 5ipsiAGlrL52
Whisker motor cortex subfieldsipsiWMCxS0.5
Whisker motor cortex A1ipsiWMCxA11.5
Medial prefrontal cortexipsimPFC3
Medial agranular prefrontal cortexipsiAGm2
Medial agranular prefrontal cortex rostral part layer 5ipsirAGmL52
Sensory regionsipsiSR1
Primary somatosensory cortexipsiS11.5
Primary somatosensory cortex hindlimb regionipsiS1HL1.5
Visual regionsipsiVR1
Nucleus of the posterior commissureipsiPCom2
Precommissural nucleusipsiPrC2
Intergeniculate leaf rostrocaudal partipsiIGLR-0.5
Ventral lateral geniculate nucleusipsiVLG2
Interpeduncular nucleusipsiIP-0.5
Cervical segment 2ipsiCS2-0.5
Area X C2ipsiSCL10C2-0.5
Spinal cord layer 5 lateral part C2ipsiSCL5lpC2-0.5
Spinal cord layer 7 C2ipsiSCL7C2-0.5
Spinal cord layer 8 C2ipsiSCL8C2-0.5
Cervical segment 3ipsiCS3-0.5
Area X C3ipsiSCL10C3-0.5
Spinal cord layer 5 lateral part C3ipsiSCL5lpC3-0.5
Spinal cord layer 7 C3ipsiSCL7C3-0.5
Spinal cord layer 8 C3ipsiSCL8C3-0.5
Cervical segment 4ipsiCS4-0.5
Area X C4ipsiSCL10C4-0.5
Spinal cord layer 5 lateral part C4ipsiSCL5lpC4-0.5
Spinal cord layer 7 C4ipsiSCL7C4-0.5
Spinal cord layer 8 C4ipsiSCL8C4-0.5
Cervical segment 5ipsiCS5-0.5
Area X C5ipsiSCL10C5-0.5
Spinal cord layer 5 lateral part C5ipsiSCL5lpC5-0.5
Spinal cord layer 7 C5ipsiSCL7C5-0.5
Spinal cord layer 8 C5ipsiSCL8C5-0.5
Cervical segment 6ipsiCS6-0.5
Area X C6ipsiSCL10C6-0.5
Spinal cord layer 5 lateral part C6ipsiSCL5lpC6-0.5
Spinal cord layer 7 C6ipsiSCL7C6-0.5
Spinal cord layer 8 C6ipsiSCL8C6-0.5
Cervical segment 7ipsiCS7-0.5
Area X C7ipsiSCL10C7-0.5
Spinal cord layer 5 lateral part C7ipsiSCL5lpC7-0.5
Spinal cord layer 7 C7ipsiSCL7C7-0.5
Spinal cord layer 8 C7ipsiSCL8C7-0.5
Cervical segment 8ipsiCS8-0.5
Area X C8ipsiSCL10C8-0.5
Deep dorsal horn C8ipsiDDHC8-1
Spinal cord layer 5 lateral part C8ipsiSCL5lpC8-0.5
Spinal cord layer 7 C8ipsiSCL7C8-0.5
Spinal cord layer 8 C8ipsiSCL8C8-0.5
Thoracal segment 1ipsiT1-0.5
Area X T1ipsiSCL10T1-0.5
Spinal cord layer 5 lateral part T1ipsiSCL5lpT1-0.5
Spinal cord layer 7 T1ipsiSCL7T1-0.5
Spinal cord layer 8 T1ipsiSCL8T1-0.5
Thoracal segment 6ipsiT61
Thoracal segment 7ipsiT71
Thoracal segment 8ipsiT81
Thoracal segment 9ipsiT91
Lumbar segment 6ipsiL61.5
Central graycontraCG1
Nuclei of the lateral lemniscuscontraNLL1
Nucleus of DarkschewitschcontraDk3
Oculomotor nucleuscontra30
Lateral dorsal border of the oculomotor nucleuscontra3LDB1
Oculomotor nucleus parvicellular partcontra3PC1
Medial accessory oculomotor nucleuscontraMA31
Rostral interstitial nucleus of medial longitudinal fasciculuscontraRI0
Periaqueductal graycontraPAG1
Dorsal periaqueductal graycontraDPAG1
Dorsolateral periaqueductal graycontraDLPAG1
Caudal part of the medial periaqueductal graycontraPAGmc1
Ventral periaqueductal graycontraVPAG0.5
Ventrolateral periaqueductal graycontraVLPAG1
Ventrolateral periaqueductal gray caudal partcontraPAGvlc-2
Red nucleuscontraR0
Prerubral fieldcontraPR1
Red nucleus magnocellular partcontraRMC1
Superior colliculuscontraSC3
Superior colliculus deep layerscontraSCd-0.5
Surrounding central tegmental fieldcontraTGACsur3
Subpeduncular tegmental nucleuscontraSPTg1
Substantia nigra A9contraSN0.5
Ventral tegmental area A10contraVTA1
Laterodorsal tegmental nucleuscontraLDTg1.5
Dorsal tegmental nucleuscontraDTg0
Pedunculopontine tegmental nucleuscontraPPTg2
Edinger Westphal nucleuscontraEW1
Dorsolateral humpcontraCERcndl-0.5
Dorsolateral hump caudal halfcontraCERcndlch-0.5
Anterior interposed nucleuscontraAIN3
Anterior interposed nucleus lateral partcontraAINL3
Posterior interposed nucleuscontraCERpin3
Posterior interposed nucleus rostroventral partcontraCERpinrv-0.5
Lateral cerebellar nucleuscontraCERL3
Lateral cerebellar nucleus hiluscontraCERLH3
Lateral cerebellar nucleus ventrolateral partcontraCERLVL-0.5
Medial cerebellar nucleuscontraMed3
Medial cerebellar nucleus caudal partcontraMedc-0.5
Medial cerebellar nucleus dorsomedial partcontraMeddm-0.5
Medial cerebellar nucleus ventral partcontraMedV3
Medial cerebellar nucleus central partcontraMedCe3
Medial cerebellar nucleus rostrocaudal extentcontraMedrce3
Medial cerebellar nucleus rostrolateral partcontraMedroL-0.5
Rostral interstitial cell groupscontraCERIcr-0.5
PonscontraP-0.5
Intermediate interstitial nucleus of the medial longitudinal fasciculuscontraII1
Locus coeruleuscontraLC1
Reticulotegmental nucleus of the ponscontraRtTg1
Prepositus nucleuscontraPr1
Intermediate reticular nucleuscontraIRt-0.5
Rostroventrolateral reticular nucleuscontraRVL1
Deep mesencephalic nucleuscontraDpMe1
Rostral mesencephalic reticular formationcontraRMRf1
Pontine reticular nucleuscontraPRN3
Pontine reticular nucleus laterocaudal partcontraPRNLC-0.5
Pontine reticular nucleus oral partcontraPnO3
Pontine reticular nucleus oral part lateral partcontraPnOL-0.5
Pontine reticular nucleus caudal partcontraPNC3
Peribrachial regioncontraPBR2
Cuneiforme nucleus dorsal partcontraCnFD-0.5
Parabrachial nucleuscontraPB1
Koelliker Fuse nucleuscontraKF3
Lateral parabrachial nucleuscontraLPB1
Lateral parabrachial nucleus central lateral partcontraLPBCL3
Parabrachial nucleus medialcontraPBnMe1
Parabrachial nucleus ventral part lateral portioncontraPBVL3
Gigantocellular reticular nucleuscontraGi1
Medullary reticular nucleuscontraMdD1
Parvicellular reticular nucleuscontraPCRt1
Abducens nucleuscontra60
Paraabducens nucleuscontraPa61
Motor trigeminal nucleuscontraMo50
Paratrochlear nucleuscontraPa40
Trochlear nucleuscontra40
Spinal vestibular nucleuscontraSpVe1
Vestibular nucleicontraVnc3
Vestibular nuclei ventromedial partcontraVncVM1
Superior vestibular nucleuscontraSuVe3
Medial vestibular nucleuscontraMVe1
Lateral vestibular nucleuscontraLVe3
Dorsal raphe nucleuscontraDR1
Dorsal raphe nucleus caudal partcontraDRC2
Dorsal raphe nucleus rostral partcontraDRr2
Nucleus of RollercontraRo1
Inferior olivecontraIO0
Dorsal paragigantocellular nucleuscontraDPGi2
Lateral paragigantocellular nucleuscontraLPGi-0.5
Diagonal band of BrocacontraDBB1
Basal nucleus MeynertcontraB-0.5
Lateral preoptic areacontraLPO0.5
Tuberomammillary nucleuscontraTuM0.5
DiencephaloncontraDEC-0.5
HypothalamuscontraHYPO2
Dorsomedial hypothalamic nucleuscontraDMHy-0.5
Tuberal nucleuscontraTU0.5
Medial mammillary nucleus 2contraMM2-0.5
Ventromedial hypothalamic nucleus central partcontraVMHC0.5
Ventromedial hypothalamic nucleus dorsomedial partcontraVMHDM0.5
Ventromedial hypothalamic nucleus ventrolateral partcontraVMHVL0.5
Lateral mammillary nucleuscontraLM-0.5
Centrolateral thalamic nucleuscontraCL0
Parafascicular thalamic nucleuscontraPF-0.5
Parafascicular thalamic nucleus ventrolateral partcontraPFvl-0.5
Reticular thalamic nucleuscontraRt1
Subparafascicular thalamic nucleus parvicellular partcontraSPFp1
Zona incertacontraZI3
Forel field H1contraFFH1-0.5
Forel field H2contraFFH2-0.5
Lateral habenular nucleuscontraLHb3
Central amygdaloid nucleuscontraCe1
Central amygdaloid nucleus lateral divisioncontraCeL0.5
Central amygdaloid nucleus medial divisioncontraCeM2
Retrosplenial agranular cortexcontraRSA0.5
Area 29dcontraA29d0.5
Retrosplenial granular cortex c regioncontraRSGc0.5
Cingulate cortexcontraCg1
Cingulate cortex area 2contraCg20.5
Area 24acontraA24a0.5
Area 24bcontraA24b0.5
Infralimbic cortexcontraIL-0.5
Frontal association cortexcontraFrA2
Parietal association cortexcontraPtA0
Hindlimb motor cortexcontraHMCx0.5
Whisker motor cortex A1contraWMCxA11.5
Medial agranular prefrontal cortexcontraAGm2
Central dysgranular zone between E4 whisker and forelimb barrel field layers 5contraS1BFcdysL51
Central dysgranular zone between E4 whisker and forelimb barrel field layers 6contraS1BFcdysL61
Posterior dygranular zone between whisker and trunk representation layer 5contraS1pdyL51
Posterior dygranular zone between whisker and trunk representation layer 6contraS1pdyL61
Visual regionscontraVR0.5
Nucleus of the posterior commissurecontraPCom1
Precommissural nucleuscontraPrC1
Internal basilar nucleus C1contraIBC1-0.5
Spinal cord layer 5 C1contraSCL5C1-0.5
Internal basilar nucleus C2contraIBC2-0.5
Spinal cord layer 5 C2contraSCL5C2-0.5
Stomach wallipsiOrgsStomWS-10
Trachea sideipsiOrgsTras2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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