University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Subthalamic nucleus rostral part left


Abbreviation
SThr
Color       
Superior regionsSubthalamic nucleus

SynonymsAbbr.Language
Subthalamic nucleus rostral partSThrEng

SubregionsSide
Subthalamic nucleus dorsal border of the rostral two-thirdleft
Subthalamic nucleus rostral halfleft

Output to

NameSideAbbr.WeightDetails
Pedunculopontine tegmental nucleus caudal partipsiPPTgC2
Pedunculopontine tegmental nucleus rostral partipsiPPTgR2
Spinal cord layers C1ipsiSCLC11
Spinal cord layers C2ipsiSCLC21
Spinal cord layers C3ipsiSCLC31
Spinal cord layers C4ipsiSCLC41
Spinal cord layers C5ipsiSCLC51
Spinal cord layers C1contraSCLC12
Spinal cord layers C2contraSCLC22
Spinal cord layers C3contraSCLC32
Spinal cord layers C4contraSCLC42
Spinal cord layers C5contraSCLC52

Input from

NameSideAbbr.WeightDetails
Superior colliculus caudal partipsicSC2.5
Midbrain extrapyramidal areaipsiMEA2
Peduncular pontine nucleus central partipsiPPNc2
Peduncular pontine nucleus lateral partipsiPPNl1
Substantia nigra compact part ventral tieripsiSNCV2
Laterodorsal tegmental nucleusipsiLDTg0
Parafascicular centre-median complexipsiPFCM2
Dorsal hippocampusipsiHIPPd0
Lateral orbital cortex medial partipsiLOm1
Dorsal hippocampuscontraHIPPd2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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