University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Parafascicular centre-median complex left


Abbreviation
PFCM
Color       
Superior regionsPosterior intralaminar thalamic nucleus

SynonymsAbbr.Language
Parafascicular centre median complex  
Centermedian parafascicular thalamic nucleusCM-PfEng
Median parafascicular complexCM-PFEng
Centre median nucleus Fr
Thalamic centromedian parafascicular complex Eng
Parafascicular-centro-median nuclear complex Eng
Parafasciculo-centro-medianus Eng
Centre median part of parafascicular thalamic nucleus Eng
Parafascicular centre-median complexPFCMEng
Centromedian parafascicular nucleus Eng

SubregionsSide
Parafascicular centre-median complex dorsomedial partleft
Posterior parafascicular centre-median complexleft

Output to

NameSideAbbr.WeightDetails
Substantia nigra A9ipsiSN0
Nucleus of the ansa lenticularisipsiAL0
Lateral hypothalamic areaipsiLH1
Mediodorsal thalamic nucleus central partipsiMDC-10
Reticular thalamic nucleusipsiRt-0.5
Reticular thalamic nucleus rostral partipsiRtr-10
Zona incertaipsiZI1
Nucleus of the fields of ForelipsiF1
Posterior part of the lateral nucleusipsiLAP-0.5
Medial globus pallidusipsiMGP0
StriatumipsiSTR2
Caudate putamenipsiCPu3
Dorsal striatumipsiCPud-0.5
Lateral striatumipsiCPul2
Subthalamic nucleusipsiSTh1
Subthalamic nucleus caudal partipsiSThc1
Subthalamic nucleus rostral partipsiSThr2
Cerebral cortexipsiCEC-0.5

Input from

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG-0.5
Periventricular gray matteripsiPVG1
Peduncularpontine nucleusipsiPPN-0.5
Substantia nigra A9ipsiSN-0.5
Laterodorsal tegmental nucleusipsiLDTg-0.5
Pedunculopontine tegmental nucleus pars compactaipsiPPNC2
Cerebellar nucleiipsiDCeN-0.5
Pontine periventricular grayipsiPPG-0.5
Pontomesencephalic reticular formationipsiPMRF1
Cuneiforme nucleusipsiCnF1
Parabrachial nucleusipsiPB1
Lateral parabrachial nucleusipsiLPB-0.5
Bulbar reticular formationipsiBRF-0.5
Substantia innominataipsiSI1
Lateral hypothalamic areaipsiLH2.5
Dorsolateral hypothalamusipsiDLH-0.5
Rostrolateral hypothalamusipsiLHArl2
Reticular thalamic nucleusipsiRt2.5
Zona incertaipsiZI-0.5
Zona incerta dorsal partipsiZID3
Bed nucleus of the stria terminalisipsiBST1
Central amygdaloid nucleusipsiCe0.5
Globus pallidusipsiGP1
Caudal globus pallidusipsiGPc0.5
Lateral globus pallidusipsiLGP0.5
Medial globus pallidusipsiMGP2.5
Medial globus pallidus caudal partipsiMGPc2
Medial globus pallidus caudal one-thirdipsiMGPcot3
Medial globus pallidus rostral partipsiMGPr0
Anterior cingulate cortexipsiACC1
Prelimbic cortexipsiPrL1
Infralimbic cortexipsiIL1
Frontal cortex area 2 layer 5ipsiFr2L53
Frontal cortex area 2 layer 6ipsiFr2L63
Insular cortexipsiICX1
Agranular insular cortex dorsal part layer 5ipsiAIDL53
Agranular insular cortex dorsal part layer 6ipsiAIDL63
Lateral agranular prefrontal cortex layer 5ipsiAGlL53
Lateral agranular prefrontal cortex layer 6ipsiAGlL63
Sensory regionsipsiSR1
Pedunculopontine tegmental nucleus pars compactacontraPPNC1
Bulbar reticular formationcontraBRF-0.5
Globus palliduscontraGP0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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