University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Superior colliculus caudal part left


Abbreviation
cSC
Color       
Superior regionsSuperior colliculus

SynonymsAbbr.Language
Superior colliculus caudal partcSCEng

SubregionsSide
Superior colliculus caudal part layersleft
Lateral portion of the caudal superior colliculusleft
Central portion of the caudal superior colliculusleft
Caudal one third of the superior colliculusleft
Most caudal part of the superior colliculusleft
Superior colliculus caudal edgeleft

Output to

NameSideAbbr.WeightDetails
Parabigeminal nucleusipsiPBG0.5
Facial nucleus medial partipsi7M1
Subthalamic nucleus caudal partipsiSThc2.5
Subthalamic nucleus rostral partipsiSThr2.5
Facial nucleus medial partcontra7M0.5
Spinal cord layers C1contraSCLC12
Spinal cord layers C2contraSCLC22

Input from

NameSideAbbr.WeightDetails
Dorsal nucleus of the lateral lemniscusipsiDLL2
Substantia nigra reticular partipsiSNR3
Principal sensory trigeminal nucleusipsiPr5-0.5
Cochlear root neuronsipsiCORN-0.5
RetinaipsiRET3
Retina nasal partipsiRETna1
Retina upper nasal regionipsiRETuna2
Lower temporal crescent of the retinaipsiRETLtc2
Medial globus pallidusipsiMGP1
Medial agranular prefrontal cortex layer 5ipsiAGmL5-2
Primary somatosensory cortex layer 5ipsiS1L5-2
Primary visual cortex monocular areaipsiV1M-2
Ventrolateral quadrant of the spinal cordipsiMESVLq-0.5
Dorsal nucleus of the lateral lemniscuscontraDLL2
Medial cerebellar nucleuscontraMed1
Principal sensory trigeminal nucleuscontraPr50.5
Spinal trigeminal nucleus interpolar partcontraSp5I0.5
Gracile nucleus principal partcontraGr3
RetinacontraRET3
Retina nasal partcontraRETna4
Peripheral nasal retina retinal ganglion cells type 1contraRETpna13
Peripheral nasal retina retinal ganglion cells type 2contraRETpna23
Peripheral nasal retina retinal ganglion cells type 3contraRETpna33
Retina upper nasal regioncontraRETuna2
Lower temporal crescent of the retinacontraRETLtc3
Retinal ganglion cells type 1contraRETgT11
Retinal ganglion cells type 2contraRETgT21
Retinal ganglion cells type 3contraRETgT31
Retina ventral partcontraRETV2
Medial agranular prefrontal cortex layer 5contraAGmL50
Primary somatosensory cortex layer 5contraS1L50
Spinal cord layers C1contraSCLC12
Spinal cord layers C2contraSCLC22

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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