University of Rostock

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Rat connectome



Anterior hippocampal formation left


Abbreviation
AHCf
Color       
Superior regionsHippocampal regions

SynonymsAbbr.Language
Anterior hippocampal formationAHCfEng
Anterior hippocampusAHCfEng

SubregionsSide
CA1 pyramidal cells in the anterior hippocampal formationleft
Molecular layer of the anterior hippocampal rudimentleft
Praecommissural hippocampusleft
Supracommissural hippocampusleft
Anterior one-third hippocampal formationleft
Anterior hippocampal continuationleft
Indusium griseum anterior hippocampal continuationleft

Output to

NameSideAbbr.WeightDetails
Median eminence external layeripsiMEeL-0.5
Nucleus of the vertical limb of the diagonal bandipsiVDB-0.5
Medial septal nucleusipsiMS-0.5
Amygdaloid complexipsiAC0.5
Basolateral amygdaloid nucleusipsiBL0.5
Basomedial amygdaloid nucleusipsiBM0.5
Bed nucleus of the stria terminalis dorsal nucleusipsiBSTd-0.5
Hippocampal septalipsiHIPPs0
Ammon hornipsiAmH-0.5
Subiculum dorsal partipsiSd-0.5
Presubiculum dorsal part deep layersipsiPrDLD-0.5
ParasubiculumipsiPaS-0.5
Entorhinal cortexipsiEnt-0.5
Lateral entorhinal cortexipsiLEnt0
Lateral entorhinal cortex ventral part layer 2ipsiVLEAL21
Lateral entorhinal cortex ventral part layer 4ipsiVLEAL43
Medial entorhinal cortexipsiMEnt0
Medial entorhinal cortex layer 2ipsiMEntLyL21
Medial entorhinal cortex layer 4ipsiMEntLyL43
Ventral entorhinal cortex layersipsiEntVeL-0.5
Retrosplenial regionsipsiRS-0.5
Cingulate cortex area 1 caudal partipsiCg1c2
Cingulate cortex area 2 caudal partipsiCg2c2
Prelimbic cortexipsiPrL2
Infralimbic cortexipsiIL2
Medial agranular prefrontal cortexipsiAGm2
Primary somatosensory cortexipsiS1-0.5
Olfactory bulb A16ipsiMOB-0.5
Lateral septal nucleusipsiLS-0.5
Septofimbrial nucleusipsiSFi-0.5
Anterodorsal one third hippocampuscontraHIPPADot2

Input from

NameSideAbbr.WeightDetails
Median raphe nucleusipsiMnR-0.5
Granule cell layer of the dentate gyrusipsiDGgL-0.5
Field CA1 of hippocampus layer stratum pyramidal cellsipsiCA1L3spc-0.5
Field CA3 of hippocampus caudal partipsiCA3C-0.5
Field CA4 of hippocampus pyramidal cellsipsiCA4Lpyc-0.5
Field CA4 of hippocampus caudal partipsiCA4C-0.5
Subiculum layer 5 pyramidal cellsipsiSuL5pyc-0.5
Entorhinal cortex layer 2ipsiEntL2-0.5
Lateral entorhinal cortex layer 1ipsiLEntL13
Lateral entorhinal cortex layer 1 spiny neuronsipsiLEntL1sn-0.5
Lateral entorhinal cortex layer 1 sparsely spinous horizontal cellsipsiLEntL1ssh-0.5
Lateral entorhinal cortex layer 2ipsiLEntL23
Lateral entorhinal cortex layer 2 stellate neuronsipsiLEntL2sn-0.5
Lateral entorhinal cortex layer 2 spiny neuronsipsiLEntL2spn-0.5
Lateral entorhinal cortex layer 2 sparsely spineous horizontal cellsipsiLEntL2ssh-0.5
Lateral entorhinal cortex layer 2 sparsely spineous multipolar neuronsipsiLEntL2ssm-0.5
Lateral entorhinal cortex layer 3ipsiLEntL33
Lateral entorhinal cortex layer 3 pyramidal neuronsipsiLEntL3py-0.5
Lateral entorhinal cortex layer 3 stellate cellsipsiLEntL3stc-0.5
Lateral entorhinal cortex layer 3 sparsely spineous multipolar neuronsipsiLEntL3ssm-0.5
Medial entorhinal cortexipsiMEnt1
Field CA2 of hippocampuscontraCA22
Field CA3 of hippocampuscontraCA33
Field CA4 of hippocampuscontraCA4-0.5
Entorhinal cortex layer 2contraEntL2-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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