University of Rostock

Department of Anatomy

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Rat connectome



Hippocampal regions left


Abbreviation
HIPPR
Color       
Superior regionsHippocampus

SynonymsAbbr.Language
 HIP 
Hippocampal regionsHIPPREng
Hippocampal Subfields Eng

SubregionsSide
Anterior hippocampal formationleft
Anterodorsal hippocampal formationleft
Anterodorsal hippocampusleft
Anteroventral hippocampal formationleft
Caudal levels of hippocampusleft
Cell populations of the hippocampusleft
Cortical region located along the dorsal bank of the rhinal sulcus at the junction of the parietal rhinal cortex and the perirhinal cortexleft
Dorsal hippocampusleft
Dorsoposterior hippocampal formationleft
Frontal pole of the hippocampusleft
Hippocampal inferior regionleft
Hippocampal septalleft
Hippocampal superior regionleft
Hippocampal temporalleft
Hippocampus intermediate partleft
Hippocampal formationleft
Subiculumleft
Neurons between fascia dentata and CA3left
Parietal rhinal cortexleft
Posterior hippocampusleft
Posterodorsal hippocampal formationleft
Septohippocampal nucleusleft
Subicular cortex border to CA1left
Ventral hippocampusleft
Ventrolateral hippocampusleft
Posteroventral part of the hippocampal formationleft
Hippocampal formation midseptotemporal partleft
Hippocampus rostral partleft
Septotemporal axis of the hippocampusleft
Hippocampal cortexleft
Non-pyramidal cells of the hippocampusleft
Temporal hippocampusleft
Lateral part of hippocampusleft
Middle hippocampusleft

Output to

NameSideAbbr.WeightDetails
Lateral preoptic areaipsiLPO0
Basolateral amygdaloid nucleusipsiBL-0.5
Bed nucleus of the stria terminalis intraamygdaloid divisionipsiBSTIA-0.5
Bed nucleus of the stria terminalis medial divisionipsiBSTM-0.5
Medial amygdaloid nucleusipsiMe-0.5
Accumbens nucleusipsiAc0
Lateral entorhinal cortexipsiLEnt4

Input from

NameSideAbbr.WeightDetails
Medial septal nucleusipsiMS-0.5
Lateral preoptic areaipsiLPO3
Magnocellular preoptic nucleusipsiMCPO-3
Anterior basolateral nucleusipsiBLA0
Posterior basolateral nucleusipsiBLP0
Basomedial amygdaloid nucleusipsiBM0
Lateral amygdaloid nucleusipsiLA0
Central amygdaloid nucleusipsiCe0
Amygdalopiriform transition areaipsiAPir-0.5
Anterior amygdaloid areaipsiAA-0.5
Anterior cortical amygdaloid nucleusipsiACo-0.5
Posterolateral cortical nucleusipsiPLCo-0.5
Anterior tip of the principal division of the medial amygdalaipsiMeApa-0.5
Medial amygdaloid nucleusipsiMe-0.5
Amygdalohippocampal areaipsiAHi-0.5
Bed nucleus of the accessory olfactory tractipsiBAOT-0.5
Posteromedial cortical nucleusipsiPMCo-0.5
Hilus of the dentate gyruscontraHil-0.5
Field CA3 of hippocampus layer stratum pyramidalecontraCA3pyr-0.5
Field CA3 of hippocampus granule cellscontraCA3Lgc-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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