| Name | Side | Abbr. | Weight | Details |
|---|
| Central gray | ipsi | CG | 0.5 | |
| Substantia nigra compact part | ipsi | SNC | 0.5 | |
| Ventral tegmental area A10 | ipsi | VTA | 1 | |
| Laterodorsal tegmental nucleus | ipsi | LDTg | 0 | |
| Dorsal tegmental nucleus pericentral part | ipsi | DTgP | 0 | |
| Locus coeruleus | ipsi | LC | 1 | |
| Nucleus incertus pars compacta | ipsi | NIc | 2 | |
| Dorsal raphe nucleus | ipsi | DR | 1 | |
| Rostral linear nucleus of the raphe | ipsi | RLi | 1 | |
| Median raphe nucleus | ipsi | MnR | 1 | |
| Pontine raphe nucleus | ipsi | PnR | 1 | |
| Dorsal endopiriform nucleus | ipsi | DEn | 0 | |
| Nucleus of the horizontal limb of the diagonal band | ipsi | HDB | 1 | |
| Nucleus of the vertical limb of the diagonal band | ipsi | VDB | 0 | |
| Basal nucleus Meynert | ipsi | B | 1 | |
| Substantia innominata | ipsi | SI | 1 | |
| Tuberomammillary nucleus | ipsi | TuM | 1 | |
| Lateral hypothalamic area [Region of tuber cinereum] | ipsi | LHTUC | 0.5 | |
| Lateral hypothalamic area | ipsi | LH | 0.5 | |
| Dorsomedial hypothalamic nucleus [Medial zone] | ipsi | DM | 0 | |
| Ventromedial hypothalamic nucleus | ipsi | VMH | 0 | |
| Dorsomedial hypothalamic nucleus [Periventricular zone] | ipsi | DMpz | 0 | |
| Anteromedial thalamic nucleus | ipsi | AM | 0 | |
| Anteromedial thalamic nucleus caudal part | ipsi | AMc | -0.5 | |
| Anteromedial thalamic nucleus caudalmost part | ipsi | AMcm | -0.5 | |
| Anteromedial thalamic nucleus rostral part | ipsi | AMr | -3 | |
| Interoanteromedial thalamic nucleus | ipsi | IAM | -0.5 | |
| Central medial thalamic nucleus | ipsi | CM | 1 | |
| Centrolateral thalamic nucleus | ipsi | CL | 2 | |
| Gelatinosus thalamic nucleus | ipsi | G | 0.5 | |
| Paracentral thalamic nucleus | ipsi | PC | 2 | |
| Parafascicular thalamic nucleus | ipsi | PF | 1 | |
| Rhomboid thalamic nucleus | ipsi | Rh | 1 | |
| Posterior thalamic nuclear group | ipsi | Po | 1 | |
| Intermediodorsal thalamic nucleus | ipsi | IMD | 1 | |
| Mediodorsal thalamic nucleus central part | ipsi | MDC | 0 | |
| Mediodorsal thalamic nucleus lateral part | ipsi | MDL | 2 | |
| Mediodorsal thalamic nucleus medial part | ipsi | MDM | 0 | |
| Paratenial thalamic nucleus | ipsi | PT | -0.5 | |
| Paraventricular thalamic nucleus | ipsi | PV | 0 | |
| Paraventricular thalamic nucleus anterior part | ipsi | PVA | 0 | |
| Paraventricular thalamic nucleus posterior part | ipsi | PVP | 1 | |
| Reuniens thalamic nucleus | ipsi | Re | 2 | |
| Ventrolateral thalamic nucleus | ipsi | VL | 2 | |
| Ventromedial thalamic nucleus | ipsi | VM | 2 | |
| Lateral posterior thalamic nucleus | ipsi | LP | 2 | |
| Laterodorsal thalamic nucleus | ipsi | LD | 0.5 | |
| Zona incerta | ipsi | ZI | 1 | |
| Nucleus of the fields of Forel | ipsi | F | 0.5 | |
| Xiphoid thalamic nucleus | ipsi | Xi | 1 | |
| Anterior basolateral nucleus | ipsi | BLA | 1 | |
| Basomedial amygdaloid nucleus | ipsi | BM | 0.5 | |
| Dorsolateral part of the lateral nucleus | ipsi | LaDL | 0 | |
| Ventrolateral part of the lateral nucleus | ipsi | LaVL | 0 | |
| Ventromedial part of the lateral nucleus | ipsi | LaVM | 0 | |
| Amygdalopiriform transition area | ipsi | APir | 0 | |
| Amygdalohippocampal area anterolateral part | ipsi | AHiAL | 0 | |
| Amygdalohippocampal area posteromedial part | ipsi | AHiPM | 0 | |
| Claustrum | ipsi | Cl | 1 | |
| Ventral pallidum | ipsi | VP | 1 | |
| Rostral striatum | ipsi | CPur | 2 | |
| Anterior hippocampal formation | ipsi | AHCf | 2 | |
| Field CA1 of hippocampus | ipsi | CA1 | 0 | |
| Field CA2 of hippocampus | ipsi | CA2 | 0 | |
| Field CA3 of hippocampus | ipsi | CA3 | 0 | |
| Subiculum | ipsi | S | 0 | |
| Presubiculum | ipsi | PrS | 0 | |
| Parasubiculum | ipsi | PaS | 0 | |
| Entorhinal cortex | ipsi | Ent | 0 | |
| Piriform cortex | ipsi | Pir | 0 | |
| Retrosplenial granular cortex c region | ipsi | RSGc | 1 | |
| Anterior cingulate cortex | ipsi | ACC | 0 | |
| Cingulate cortex area 1 | ipsi | Cg1 | 1 | |
| Cingulate cortex area 1 caudal part | ipsi | Cg1c | 2.5 | |
| Cingulate cortex area 2 | ipsi | Cg2 | 1 | |
| Cingulate cortex area 2 caudal part | ipsi | Cg2c | 2.5 | |
| Prelimbic cortex | ipsi | PrL | 1 | |
| Prelimbic cortex dorsal part | ipsi | PrLd | 2 | |
| Prelimbic cortex ventral part | ipsi | PrLv | 1 | |
| Infralimbic cortex | ipsi | IL | 1 | |
| Frontal cortex area 2 | ipsi | Fr2 | 2.5 | |
| Parietal cortex area 1 | ipsi | Par1 | 0 | |
| Parietal cortex area 2 | ipsi | Par2 | 0 | |
| Temporal association area 3 | ipsi | Te3 | 1 | |
| Agranular insular cortex | ipsi | AI | 0 | |
| Dysgranular insular cortex | ipsi | DI | 0 | |
| Perirhinal cortex | ipsi | A35 | 1 | |
| Dorsal peduncular cortex | ipsi | DP | 1 | |
| Medial agranular prefrontal cortex | ipsi | AGm | 1 | |
| Primary somatosensory cortex forelimb region | ipsi | S1FL | 0 | |
| Primary somatosensory cortex hindlimb region | ipsi | S1HL | 1 | |
| Secondary visual cortex medial area | ipsi | V2M | 1 | |
| Secondary visual cortex lateral area | ipsi | V2L | 1 | |
| Lateral orbital cortex caudal part | ipsi | LOc | 1 | |
| Lateral orbital cortex rostral part | ipsi | LOr | 1 | |
| Medial orbital cortex | ipsi | MO | 1 | |
| Ventrolateral orbital area | ipsi | VLO | 1 | |
| Lateral septal nucleus intermediate part | ipsi | LSI | 0 | |
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