University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Substantia nigra compact part ventral tier dopaminergic neuron population left


Abbreviation
SNCVdopa
Color       
Superior regionsSubstantia nigra compact part ventral tier

SynonymsAbbr.Language
Substantia nigra compact part ventral tier dopaminergic neuron populationSNCVdopa 

Output to

NameSideAbbr.WeightDetails
Substantia nigra compact partipsiSNC0.5
Ventral tegmental area A10ipsiVTA0.5
Pedunculopontine tegmental nucleusipsiPPTg0.5
Deep mesencephalic nucleusipsiDpMe0.5
Anteromedial thalamic nucleusipsiAM0.5
Anteroventral thalamic nucleusipsiAV0.5
Centrolateral thalamic nucleusipsiCL0.5
Paracentral thalamic nucleusipsiPC0.5
Parafascicular thalamic nucleusipsiPF0.5
Mediodorsal thalamic nucleusipsiMD0.5
Ventral anterior-lateral complex of the thalamusipsiVAL0.5
Ventral posterolateral thalamic nucleusipsiVPL1
Ventromedial thalamic nucleusipsiVM-0.5
Reticular thalamic nucleusipsiRt1
Ventral medial nucleus of the thalamusipsiVMT1
Zona incertaipsiZI0.5
Nucleus of the fields of ForelipsiF0.5
Lateral habenular nucleusipsiLHb0.5
Lateral globus pallidusipsiLGP0.5
Medial globus pallidusipsiMGP0.5
Caudate putamenipsiCPu0.5
Striatal matrix compartmentipsiSMC0.5
Striatal patch compartmentipsiSPC0.5
Subcallosal streakipsiSCS0.5
Subthalamic nucleusipsiSTh0.5
Primary somatosensory cortexipsiS10.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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