University of Rostock

Department of Anatomy

Neuroscience Group

 Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Anteromedial thalamic nucleus left


Abbreviation
AM
Color       
Superior regionsAnterior group of the dorsal thalamus

SynonymsAbbr.Language
Anteromedial nucleus thalamusAMEng
Anteromedial thalamic nucleusAMEng
Anteromedial thalamus Eng
Pars medialis of the anterior thalamus Eng

SubregionsSide
Anteromedial thalamic nucleus caudal partleft
Anteromedial thalamic nucleus caudalmedial partleft
Anteromedial thalamic nucleus caudalmost partleft
Anteromedial thalamic nucleus caudodorsal partleft
Anteromedial thalamic nucleus central partleft
Anteromedial thalamic nucleus dorsal partleft
Anteromedial thalamic nucleus dorsomedial partleft
Anteromedial thalamic nucleus intermediate partleft
Anteromedial thalamic nucleus lateral partleft
Anteromedial thalamic nucleus rostral partleft
Anteromedial thalamic nucleus rostrolateral partleft
Anteromedial thalamic nucleus ventral partleft
Anteromedial thalamic nucleus ventrolateral partleft
Anteromedial thalamic nucleus ventromedial partleft
Medialmost part of the anteromedial thalamic nucleusleft
Anterior part of the anteromedial thalamic nucleusleft
Anteromedial thalamic nucleus posterolateral partleft
Anteromedial thalamic nucleus posteromedial partleft
Anteromedial thalamic nucleus posterior partleft
Rostroventral anteromedial thalamic nucleusleft
Interanteromedial thalamic nucleusleft
Dorsolateral anteromedial thalamic nucleusleft

Output to

NameSideAbbr.WeightDetails
Paralemniscal nucleusipsiPL2
Ventral tegmental area A10ipsiVTA-0.5
Laterodorsal tegmental nucleusipsiLDTg2.5
Pedunculopontine tegmental nucleusipsiPPTg1
Median preoptic nucleusipsiMnPO2
Ventrolateral preoptic nucleusipsiVLPO1
Medial mammillary nucleus lateral partipsiML-0.5
Anterior group of the dorsal thalamusipsiATN-0.5
Anterodorsal thalamic nucleus posterior two-thirdsipsiADptt0
Anteroventral thalamic nucleus posterior part posterior two-thirdsipsiAVPptt0
Anteroventral thalamic nucleus rostral partipsiAVRo-0.5
Mediodorsal thalamic nucleus medial partipsiMDM-10
Submedius thalamic nucleusipsiSub2
Reticular thalamic nucleusipsiRt-0.5
Reticular thalamic nucleus rostral partipsiRtr2
Dorsal part of reticular thalamic nucleus rostral partipsiRtrD1
Pineal glandipsiPi2
Medial forebrain bundle at the level of the anterior commissureipsimfbac0
Medial forebrain bundle at the level of the lateral preoptic areraipsimfbLpa0
Medial forebrain bundle at the level of the anterior hypothalamic nucleusipsimfbahn-2
Medial forebrain bundle at the level of the lateral hypothalamusipsimfbLH-2
Medial forebrain bundle at the level of the posterior hypothalamic nucleusipsimfbPH0
Dorsal bank of the anterior portion of the rhinal fissureipsidarf0
Basolateral amygdaloid nucleusipsiBL-0.5
Lateral amygdaloid nucleusipsiLA-0.5
Central amygdaloid nucleusipsiCe-0.5
Globus pallidusipsiGP0
Medial striatumipsiCPum1
Dorsal striatumipsiCPud1
Rostral striatumipsiCPur-0.5
HippocampusipsiHIPP3
Dorsal hippocampusipsiHIPPd3
Field CA1 of hippocampusipsiCA13
Field CA3 of hippocampusipsiCA3-0.5
SubiculumipsiS2
Subiculum distal partipsiSdi0
Subiculum dorsal distal partipsiSdd-0.5
Subiculum ventral partipsiSv3
PresubiculumipsiPrS1
Presubiculum layer 1ipsiPrSL1-0.5
Presubiculum deep layersipsiPrSDL-0.5
ParasubiculumipsiPaS2
PostsubiculumipsiPost3
Entorhinal cortexipsiEnt3
Lateral entorhinal cortexipsiLEnt3
Medial entorhinal cortex dorsal partipsiMEntD2
Medial entorhinal cortex lateral partipsiMEntL3
Medial entorhinal cortex layer 3ipsiMEntLyL31.5
Medial entorhinal cortex caudal partipsiMEntCa3
Retrosplenial regionsipsiRS3
Retrosplenial dorsalipsiRSd3
Retrosplenial ventral partipsiRSPv3
Retrosplenial area ventral part zone b/cipsiRSPv-bc2
Retrosplenial agranular cortexipsiRSA-0.5
Retrosplenial agranular cortex layer 1ipsiRSAL13
Retrosplenial agranular cortex layer 3ipsiRSAL33
Retrosplenial dysgranular cortex layer 1ipsiRSdysL13
Retrosplenial dysgranular cortex layer 4ipsiRSdysL43
Retrosplenial dysgranular cortex layer 5ipsiRSdysL53
Retrosplenial dysgranular cortex layer 6ipsiRSdysL63
Midrostrocaudal part of the retrosplenial dysgranular cortexipsiRSdysmrc2
Lateral part of the retrosplenial dysgranular cortexipsiRSdysLa2
Retrosplenial granular cortexipsiRSGra-0.5
Retrosplenial granular b cortex layer 4ipsiRSGb42
Retrosplenial granular b cortex layer 1ipsiRSGb12
Retrosplenial granular cortex c regionipsiRSGc1
Cerebral cortex layer 1ipsiCCL11
Limbic regionsipsiLR-0.5
Cingulate cortexipsiCg3
Anterior cingulate cortexipsiACC3
Anterior cingulate cortex anterior partipsiACCa2
Anterior cingulate cortex caudal part layer 1ipsiACCcL1-0.5
Anterior cingulate cortex layer 5ipsiACCL53
Anterior cingulate cortex posterior partipsiACCp1.5
Cingulate cortex area 1ipsiCg1-0.5
Cingulate cortex area 1 caudal partipsiCg1c0
Cingulate cortex area 1 rostral partipsiCg1r2
Cingulate cortex area 2ipsiCg2-0.5
Cingulate cortex area 2 caudal partipsiCg2c0
Cingulate cortex area 3ipsiCg31
Dorsal anterior cingulate cortexipsiDACC3
Dorsal anterior cingulate cortex layer 3ipsiDACCL33
Dorsal anterior cingulate cortex layer 5ipsiDACCL53
Dorsal anterior cingulate cortex layer 6ipsiDACCL63
Dorsal anterior cingulate cortex layer 1aipsiDACCL1a3
Ventral anterior cingulate cortexipsiVACC3
Ventral anterior cingulate cortex layer 3ipsiVACCL3-0.5
Rostral part of the ventral anterior cingulate cortex layer 1ipsiVACCRL1-0.5
Rostral part of the ventral anterior cingulate cortex layer 3ipsiVACCRL3-0.5
Rostral part of the ventral anterior cingulate cortex layer 6ipsiVACCRL6-0.5
Middle cingulate cortexipsiMCC-0.5
Posterior cingulate cortexipsiPCC-0.5
Posterior cingulate cortex anterior partipsiPCCa2
Posterior cingulate cortex posterior partipsiPCCp1
Prelimbic cortexipsiPrL3
Prelimbic cortex layer 1ipsiPrLL1-0.5
Prelimbic cortex layer 3ipsiPrLL3-0.5
Prelimbic cortex layer 6ipsiPrLL6-0.5
Prelimbic cortex rostral partipsiPrLr-0.5
Infralimbic areaipsiiLA2
Infralimbic cortexipsiIL2
Infralimbic cortex anterior part layer 5ipsiILAnL53
Infralimbic cortex anterior part layer 6ipsiILAnL63
Frontal cortex area 1ipsiFr12
Frontal cortex area 2 caudal partipsiFr2C3
Frontal cortex area 2 rostral partipsiFr2R0
Most ventral part of the pregenual part of the anteromedial cortexipsiFr2mvpg0
Frontal cortex area 2 dorsal part layer 1aipsiFr2DL1a3
Frontal cortex area 2 dorsal part layer 3ipsiFr2DL33
Frontal cortex area 2 dorsal part layer 5ipsiFr2DL53
Frontal cortex area 2 dorsal part layer 6ipsiFr2DL63
Parietal association cortexipsiPtA3
Parietal cortex posterior areaipsiParP2
Parietal cortex posterior area caudal part of the lateral portionipsiParPcL-0.5
Temporal association area 2ipsiTe21
Ventral temporal association cortexipsiTev-1
Supragranular layers of the auditory cortexipsiAULs3
Frontal polar cortexipsiFP0
Insular cortexipsiICX3
Agranular insular cortexipsiAI-0.5
Agranular insular cortex dorsal part superficial layersipsiAIDsL1
Dysgranular insular cortexipsiDI-0.5
Perirhinal cortexipsiA353
Prefrontal cortexipsiPFC2
Prefrontal cortex supragenual partipsisgPFC0
Most ventral part of the pregenual sector of the prefrontal cortexipsimvpgPFC0
Dorsal part of the pregenual sector of the prefrontal cortexipsidpgPFC0
Lateral agranular prefrontal cortexipsiAGl2
Elbow flexion motor cortexipsiEFMCx1
Ankle dorsiflexion motor cortexipsiADFMCx0
Ankle plantar flexion motor cortexipsiAPFMCx0
Hip flexion motor cortexipsiHFMCx1
Medial prefrontal cortexipsimPFC3
Medial prefrontal cortex layer 5ipsimPFCL53
Medial prefrontal cortex layer 3ipsimPFCL33
Medial prefrontal cortex layer 4ipsimPFCL43
Medial prefrontal cortex posterior partipsimPFCp3
Medial agranular prefrontal cortexipsiAGm3
Medial agranular prefrontal cortex anterior partipsiAGmA3
Primary somatosensory cortexipsiS11
Infragranular layer of visual cortexipsiIGVR0
Primary visual cortexipsiV11
Central primary visual areaipsiV1Ce1
Supragranular layer of visual cortexipsiSGVR0
Secondary visual cortexipsiV22
Secondary visual cortex medial areaipsiV2M1
Secondary visual cortex medial area layer 1ipsiV2ML12
Secondary visual cortex lateral area layer 1ipsiV2LL12
Lateral extrastriate cortexipsiVISxL-1
Medial extrastriate cortexipsiVISM2
Lateral orbital cortexipsiLO-0.5
Medial orbital cortexipsiMO1
Ventral orbital cortexipsiVO1
Ventrolateral orbital areaipsiVLO3
Ventrolateral orbital area layer 3ipsiVLOL33
Ventrolateral orbital area layer 1ipsiVLOL13
Interpeduncular nucleusipsiIP2
Dorsal part of the anterior olfactory nucleus pars externaipsiAONeD1
Cervical segment 7ipsiCS7-1
Laterodorsal tegmental nucleuscontraLDTg2.5
Pedunculopontine tegmental nucleuscontraPPTg1
Ventrolateral preoptic nucleuscontraVLPO-0.5
Submedius thalamic nucleus dorsal partcontraSubD2
Dorsal hippocampuscontraHIPPd2
Field CA1 of hippocampuscontraCA11
Subiculum ventral partcontraSv-0.5
Anterior cingulate cortexcontraACC2
Cingulate cortex area 1contraCg1-0.5
Cingulate cortex area 2contraCg2-0.5
Parietal association cortexcontraPtA2
Supragranular layers of the auditory cortexcontraAULs3
Insular cortexcontraICX1
Dysgranular insular cortexcontraDI-0.5
Lateral agranular prefrontal cortexcontraAGl1
Medial agranular prefrontal cortexcontraAGm1
Interpeduncular nucleuscontraIP2
Cervical segment 7contraCS7-1

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG1
Paralemniscal nucleusipsiPL2
Ventral periaqueductal grayipsiVPAG0
Periventricular gray matteripsiPVG0
Superior colliculusipsiSC0
Central tegmental fieldipsiTGAC0
Substantia nigra compact part ventral tieripsiSNCV2
Substantia nigra compact part ventral tier dopaminergic neuron populationipsiSNCVdopa0.5
Substantia nigra reticular partipsiSNR3
Ventral tegmental area A10 dorsolateral part dorsal periventricular partipsiVTAdLdv-0.5
Laterodorsal tegmental nucleusipsiLDTg0.5
Dorsal tegmental nucleusipsiDTg1
Pedunculopontine tegmental nucleusipsiPPTg-0.5
Lateral cerebellar nucleus central partipsiCERLce0.5
Lateral cerebellar nucleus rostral partipsiCERLr0.5
Locus coeruleusipsiLC3
Gigantocellular reticular nucleusipsiGi0
Medial subnucleus reticularis ventralis rostral partipsiMSRVr2.5
Raphe nucleiipsiRAN-0.5
Dorsal raphe nucleusipsiDR-0.5
Median raphe nucleusipsiMnR1
Pontine raphe nucleusipsiPnR0
Raphe magnus nucleusipsiRMg0
Nucleus of the horizontal limb of the diagonal bandipsiHDB1
Lateral part of the nucleus of the horizontal limb of the diagonal bandipsiLPHDB0
Nucleus of the vertical limb of the diagonal bandipsiVDB2
Nucleus of the vertical limb of the diagonal band lateral partipsiVDBL2
Medial septal nucleusipsiMS0
HypothalamusipsiHYPO-0.5
Lateral hypothalamic areaipsiLH2
Lateral hypothalamic area perifornical partipsiPFx2
Anterior hypothalamic nucleusipsiAHn-2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM2
Posterior hypothalamic areaipsiPHA2
Posterior hypothalamic nucleus caudal partipsiPHCa0
Posterior hypothalamic nucleus rostral partipsiPHRo0
Suprachiasmatic nucleusipsiSCh3
Suprachiasmatic nucleus dorsomedial partipsiSCnDM1
Suprachiasmatic nucleus ventrolateral partipsiSCnVL1
Incerto hypothalamic areaipsiicHYPO1
Mammillary bodyipsiCMAM3
Lateral mammillary nucleusipsiLM1
Medial mammillary nucleusipsiMMn3
Medial mammillary nucleus lateral partipsiML3
Medial mammillary nucleus medial partipsiMM3
Lateral part of pars medialis of the medial mammillary nucleusipsiMLM-0.5
Medial mammillary nucleus median partipsiMMnm2
Medial mammillary nucleus posterior partipsiMMNp1
Premammillary nucleus dorsal partipsiPMD2.5
Supramammillar nucleusipsiSuM2
Supramammillar nucleus lateral part lateral subpartipsiSuMLL0
Supramammillar nucleus lateral part medial subpartipsiSuMLM1
Supramammillar nucleus medial partipsiSuMM1
ThalamusipsiT-0.5
Anterior group of the dorsal thalamusipsiATN0.5
Anteroventral thalamic nucleusipsiAV0.5
Paracentral thalamic nucleusipsiPC1
Rhomboid thalamic nucleusipsiRh1.5
Paratenial thalamic nucleusipsiPT1
Reuniens thalamic nucleusipsiRe1
Reticular thalamic nucleusipsiRt2.5
Reticular thalamic nucleus medial part ventral partipsiRtmv2
Dorsal part of reticular thalamic nucleus rostral partipsiRtrD0
Pretectal regionipsiPRT0
Basolateral amygdaloid nucleusipsiBL-0.5
Lateral amygdaloid nucleusipsiLA-0.5
Central amygdaloid nucleusipsiCe2
Globus pallidusipsiGP2
Parasubthalamic nucleusipsiPSTh-2
Bed nucleus of the anterior commissureipsiBAC0
HippocampusipsiHIPP-0.5
Hippocampus intermediate partipsiHIPPip-0.5
Hilus of the dentate gyrusipsiHil0
Field CA1 of hippocampusipsiCA10
Field CA1 of hippocampus ventral poleipsiCA1vp1
Field CA2 of hippocampusipsiCA20
Field CA3 of hippocampusipsiCA30
SubiculumipsiS2
Border of the subiculumipsiSbo-0.5
Intermediate subiculumipsiInSu-0.5
Intermediate subiculum stratum radiatum deeper partipsiInSusrd2
Subiculum distal partipsiSdi1
Subiculum dorsal partipsiSd3
Septal dorsal subiculumipsiSSd-0.5
Subiculum dorsal halfipsiSdh3
Subiculum dorsal part deeper layersipsiSdLde3
Subiculum dorsal part stratum radiatum deeper partipsiSdLrde1
Subiculum dorsal proximal partipsiSdp-0.5
Subiculum proximal partipsiSpx3
Subiculum posterolateral part of the proximal partipsiSpxpL-0.5
Subiculum ventral partipsiSv3
Subiculum ventral halfipsiSvh0.5
Subiculum ventral part stratum radiatumipsiSvSR2
PresubiculumipsiPrS-0.5
Lamina principalis externa of the presubiculumipsiPrSLpe1
Lamina principalis interna of the presubiculumipsiPrSLpi3
Dorsal one half of the lamina principalis interna of the presubiculumipsiPrSdhLpi0.5
Ventral parasubiculumipsiPaSV1
PostsubiculumipsiPost3
Postsubiculum layersipsiPostL0.5
Postsubiculum layer 5ipsiPostL50.5
Postsubiculum layer 6ipsiPostL60.5
Entorhinal cortexipsiEnt-0.5
Entorhinal cortex layer 4ipsiEntL4-2
Lateral entorhinal cortexipsiLEnt0
Lateral entorhinal cortex deep layer 5ipsiLEntL5b0
Medial entorhinal cortex layer 2ipsiMEntLyL21
Medial entorhinal cortex layer 3ipsiMEntLyL31
Medial entorhinal cortex deep layer 5ipsiMEntLyL5b0
Retrosplenial regionsipsiRS3
Retrosplenial dorsalipsiRSd3
Retrosplenial cortexipsiRSCx3
Retrosplenial agranular cortexipsiRSA3
Retrosplenial agranular cortex deep layersipsiRSAdL3
Retrosplenial dysgranular cortexipsiRSdys1
Midrostrocaudal part of the retrosplenial dysgranular cortexipsiRSdysmrc3
Retrosplenial granular cortexipsiRSGra3
Retrosplenial granular a cortex layer 2ipsiRSGa22
Retrosplenial granular a cortex layer 3ipsiRSGa31
Retrosplenial granular a cortex layer 5ipsiRSGa52
Retrosplenial granular a cortex layer 6ipsiRSGa62
Retrosplenial granular b cortex caudal part layer 2ipsiRSGbcL22
Retrosplenial granular b cortex caudal part layer 3ipsiRSGbcL31
Retrosplenial granular b cortex layer 3ipsiRSGb31.5
Retrosplenial granular b cortex layer 4ipsiRSGb41
Retrosplenial granular b cortex superficial layersipsiRSGbsL0
Retrosplenial granular b cortex layer 1ipsiRSGb10.5
Retrosplenial granular b cortex layer 2ipsiRSGb22
Retrosplenial granular b cortex layer 5ipsiRSGb52
Retrosplenial granular b cortex layer 6ipsiRSGb63
Retrosplenial granular cortex b region rostrocaudal middle layersipsiRSGbrcmL1
Retrosplenial granular cortex c regionipsiRSGc0.5
Deep layers of retrosplenial granular cortexipsiDRSG3
Retrosplenial granular cortex layer 5ipsiRSGL52
Retrosplenial granular cortex layer 6ipsiRSGL62
Retrosplenial granular cortex rostral partipsiRSGr1
Cerebral cortex layer 1ipsiCCL12
Anterior cingulate cortexipsiACC3
Anterior cingulate cortex layer 3ipsiACCL33
Anterior cingulate cortex layer 5ipsiACCL53
Anterior cingulate cortex layer 6ipsiACCL63
Anterior cingulate cortex layer 4ipsiACCL43
Cingulate cortex area 3 layer 6ipsiCg3L6-0.5
Dorsal anterior cingulate cortex layer 6ipsiDACCL61
Ventral anterior cingulate cortexipsiVACC2
Posterior cingulate cortexipsiPCC3
Posterior cingulate cortex granular partipsiPCCg2
Posterior cingulate cortex agranular partipsiPCCag2
Prelimbic cortexipsiPrL2.5
Prelimbic cortex anteroposterior partipsiPrLap2
Prelimbic cortex dorsal part layer 6ipsiPrLdL6-0.5
Prelimbic cortex dorsoventral partipsiPrLdv2
Prelimbic cortex layer 5ipsiPrLL51
Prelimbic cortex layer 6ipsiPrLL63
Prelimbic cortex rostral partipsiPrLr3
Prelimbic cortex most rostral partipsiPrLmr4
Prelimbic cortex rostral part layer 5ipsiPrLrL53
Prelimbic cortex rostral part layer 6ipsiPrLrL63
Infralimbic areaipsiiLA2
Infralimbic cortexipsiIL2
Frontal cortex area 2ipsiFr23
Dysgranular insular cortexipsiDI2
Dysgranular insular cortex layer 5ipsiDIL51
Dysgranular insular cortex layer 6ipsiDIL62
Dysgranular insular cortex layer 6aipsiDIL6a3
Perirhinal cortexipsiA35-0.5
Motoric regionsipsiM3
Lateral agranular prefrontal cortexipsiAGl2
Medial agranular prefrontal cortexipsiAGm2
Medial agranular prefrontal cortex layer 5ipsiAGmL51
Medial agranular prefrontal cortex layer 6ipsiAGmL62
Medial agranular prefrontal cortex medial partipsimAGm2
Medial agranular prefrontal cortex rostral partipsirAGm2
Posterior part of the medial agranular prefrontal cortexipsiPoAGm-0.5
Sensory regionsipsiSR2
Medial extrastriate cortexipsiVISM2
Orbital cortexipsiOrC-0.5
Medial orbital cortexipsiMO2
Ventral orbital cortexipsiVO2
Septal regionipsiSER-0.5
Dorsal medial septumipsiDMS0
Dorsolateral septumipsiDLSER0
Ventral medial septumipsiVMSe-0.5
Ventrolateral septal regionipsiVLSER0
Caudoventral septal regionipsiCVSER-2
Cervical segment 1ipsiCS1-3
Intermediomedial cell column C1ipsiIMMC1-3
Lateral cervical nucleus C1ipsiLatCC1-3
Lateral spinal nucleus C1ipsiLSpC1-3
Area X C1ipsiSCL10C1-3
Dorsal horn C1ipsiDHC1-3
Spinal cord layer 1 C1ipsiSCL1C1-3
Cervical segment 2ipsiCS2-3
Intermediomedial cell column C2ipsiIMMC2-3
Lateral cervical nucleus C2ipsiLatCC2-3
Lateral spinal nucleus C2ipsiLSpC2-3
Area X C2ipsiSCL10C2-3
Dorsal horn C2ipsiDHC2-3
Spinal cord layer 1 C2ipsiSCL1C2-3
Cervical segment 4ipsiCS4-3
Intermediomedial cell column C4ipsiIMMC4-3
Lateral cervical nucleus C4ipsiLatCC4-3
Lateral spinal nucleus C4ipsiLSpC4-3
Area X C4ipsiSCL10C4-3
Dorsal horn C4ipsiDHC4-3
Spinal cord layer 1 C4ipsiSCL1C4-3
Cervical segment 5ipsiCS5-3
Intermediomedial cell column C5ipsiIMMC5-3
Lateral cervical nucleus C5ipsiLatCC5-3
Lateral spinal nucleus C5ipsiLSpC5-3
Area X C5ipsiSCL10C5-3
Dorsal horn C5ipsiDHC5-3
Spinal cord layer 1 C5ipsiSCL1C5-3
Cervical segment 7ipsiCS7-3
Intermediomedial cell column C7ipsiIMMC7-3
Lateral cervical nucleus C7ipsiLatCC7-3
Lateral spinal nucleus C7ipsiLSpC7-3
Area X C7ipsiSCL10C7-3
Dorsal horn C7ipsiDHC7-3
Spinal cord layer 1 C7ipsiSCL1C7-3
Cervical segment 8ipsiCS8-3
Intermediomedial cell column C8ipsiIMMC8-3
Lateral cervical nucleus C8ipsiLatCC8-3
Lateral spinal nucleus C8ipsiLSpC8-3
Area X C8ipsiSCL10C8-3
Dorsal horn C8ipsiDHC8-3
Spinal cord layer 1 C8ipsiSCL1C8-3
Thoracal segment 4ipsiT4-3
Intermediomedial cell column T4ipsiIMMT4-3
Lateral spinal nucleus T4ipsiLSpT4-3
Area X T4ipsiSCL10T4-3
Dorsal horn T4ipsiDHT4-3
Spinal cord layer 1 T4ipsiSCL1T4-3
Thoracal segment 8ipsiT8-3
Intermediomedial cell column T8ipsiIMMT8-3
Lateral spinal nucleus T8ipsiLSpT8-3
Area X T8ipsiSCL10T8-3
Dorsal horn T8ipsiDHT8-3
Spinal cord layer 1 T8ipsiSCL1T8-3
Thoracal segment 12ipsiT12-3
Intermediomedial cell column T12ipsiIMMT12-3
Lateral spinal nucleus T12ipsiLSpT12-3
Area X T12ipsiSCL10T12-3
Dorsal horn T12ipsiDHT12-3
Spinal cord layer 1 T12ipsiSCL1T12-3
Lumbar segment 1ipsiL1-3
Intermediomedial cell column L1ipsiIMML1-3
Lateral spinal nucleus L1ipsiLSpL1-3
Area X L1ipsiSCL10L1-3
Dorsal horn L1ipsiDHL1-3
Spinal cord layer 1 L1ipsiSCL1L1-3
Lumbar segment 2ipsiL2-3
Intermediomedial cell column L2ipsiIMML2-3
Lateral spinal nucleus L2ipsiLSpL2-3
Area X L2ipsiSCL10L2-3
Dorsal horn L2ipsiDHL2-3
Spinal cord layer 1 L2ipsiSCL1L2-3
Lumbar segment 3ipsiL3-3
Intermediomedial cell column L3ipsiIMML3-3
Lateral spinal nucleus L3ipsiLSpL3-3
Area X L3ipsiSCL10L3-3
Dorsal horn L3ipsiDHL3-3
Spinal cord layer 1 L3ipsiSCL1L3-3
Lumbar segment 4ipsiL4-3
Intermediomedial cell column L4ipsiIMML4-3
Lateral spinal nucleus L4ipsiLSpL4-3
Area X L4ipsiSCL10L4-3
Dorsal horn L4ipsiDHL4-3
Spinal cord layer 1 L4ipsiSCL1L4-3
Lumbar segment 5ipsiL5-3
Intermediomedial cell column L5ipsiIMML5-3
Lateral spinal nucleus L5ipsiLSpL5-3
Area X L5ipsiSCL10L5-3
Dorsal horn L5ipsiDHL5-3
Spinal cord layer 1 L5ipsiSCL1L5-3
Lumbar segment 6ipsiL6-3
Intermediomedial cell column L6ipsiIMML6-3
Lateral spinal nucleus L6ipsiLSpL6-3
Area X L6ipsiSCL10L6-3
Dorsal horn L6ipsiDHL6-3
Spinal cord layer 1 L6ipsiSCL1L6-3
Sacral segment 2ipsiSa2-3
Intermediomedial cell column S2ipsiIMMS2-3
Lateral spinal nucleus S2ipsiLSpS2-3
Area X S2ipsiSCL10S2-3
Dorsal horn S2ipsiDHS2-3
Spinal cord layer 1 S2ipsiSCL1S2-3
Central graycontraCG0.5
Lateral cerebellar nucleus central partcontraCERLce2
Lateral cerebellar nucleus rostral partcontraCERLr2
Locus coeruleuscontraLC3
Suprachiasmatic nucleus dorsomedial partcontraSCnDM-0.5
Suprachiasmatic nucleus ventrolateral partcontraSCnVL-0.5
Lateral mammillary nucleuscontraLM1
Medial mammillary nucleus lateral partcontraML1
Medial mammillary nucleus medial partcontraMM-0.5
Lateral part of pars medialis of the medial mammillary nucleuscontraMLM-0.5
Premammillary nucleus dorsal partcontraPMD2
Reticular thalamic nucleus rostral partcontraRtr2
Reticular thalamic nucleus ventromedial partcontraRtvm1.5
Zona incertacontraZI2
Globus palliduscontraGP0
SubiculumcontraS-0.5
Subiculum dorsal partcontraSd3
Subiculum dorsal proximal partcontraSdp-0.5
Subiculum ventral partcontraSv1
PostsubiculumcontraPost3
Retrosplenial cortexcontraRSCx3
Retrosplenial agranular cortexcontraRSA1
Retrosplenial dysgranular cortexcontraRSdys-0.5
Midrostrocaudal part of the retrosplenial dysgranular cortexcontraRSdysmrc1
Retrosplenial granular cortexcontraRSGra3
Retrosplenial granular cortex layer 5contraRSGL52
Retrosplenial granular cortex layer 6contraRSGL62
Anterior cingulate cortexcontraACC3
Anterior cingulate cortex layer 3contraACCL33
Anterior cingulate cortex layer 5contraACCL53
Anterior cingulate cortex layer 6contraACCL63
Anterior cingulate cortex layer 4contraACCL43
Cingulate cortex area 3 layer 6contraCg3L6-0.5
Posterior cingulate cortexcontraPCC1
Posterior cingulate cortex granular partcontraPCCg1
Posterior cingulate cortex agranular partcontraPCCag1
Prelimbic cortexcontraPrL-0.5
Prelimbic cortex dorsal part layer 6contraPrLdL6-0.5
Prelimbic cortex rostral partcontraPrLr3
Prelimbic cortex rostral part layer 5contraPrLrL53
Prelimbic cortex rostral part layer 6contraPrLrL63
Frontal cortex area 2contraFr21
Lateral agranular prefrontal cortexcontraAGl1
Medial agranular prefrontal cortexcontraAGm2
Medial agranular prefrontal cortex layer 6contraAGmL62
Medial agranular prefrontal cortex rostral partcontrarAGm2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications