University of Rostock

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Rat connectome



Posteromedial barrel subfield left


Abbreviation
PMBSF
Color       
Superior regionsPrimary somatosensory cortex barrel field

SynonymsAbbr.Language
Posteromedial barrel subfieldPMBSFEng
Posteromedial barrel field Eng
Posteromedial barrel subfield of Walker and Woosely LL Eng

SubregionsSide
Posteromedial barrel subfield vibrissae row Aleft
Posteromedial barrel subfield vibrissae row Bleft
Posteromedial barrel subfield vibrissae row Cleft
Posteromedial barrel subfield vibrissae row Dleft
Posteromedial barrel subfield vibrissae row Eleft
Posteromedial barrel subfield alphaleft
Posteromedial barrel subfield betaleft
Posteromedial barrel subfield gammaleft
Posteromedial barrel subfield deltaleft
Posteromedial barrel subfield dysgranular regionleft
Posteromedial barrel subfield quadrantsleft
Posteromedial barrel subfield layersleft

Output to

NameSideAbbr.WeightDetails
Superior colliculus intermediate layersipsiSCi2
Intermediate gray layer of the superior colliculusipsiInG2
Intermediate white layer of the superior colliculusipsiInWh2
Peripeduncular nucleus ventral partipsiPPv-0.5
Medial part of the ventral peripeduncular nucleusipsiPPvM-0.5
Lateral pontine nucleusipsiLPn-0.5
Pontine nucleiipsiPn3
Caudal half of the pontine nucleiipsiBPNch-0.5
Caudalmost third of the pontine nucleiipsiCmBPNc-0.5
Pontine nucleus medial partipsiBPNm-0.5
Pontine nucleus ventral partipsiBPNv-0.5
Lateral part of the ventral pontine nucleusipsiBPNLV-0.5
Rostral centrolateral pontine nucleiipsiPnRCLa-0.5
Spinal trigeminal nucleusipsiSp5nc1
Ventral posteromedial thalamic nucleusipsiVPM3
Posterior part of the reticular thalamic nucleusipsiRtP-0.5
Internal capsuleipsiic-0.5
Caudate putamenipsiCPu-0.5
Dorsolateral striatumipsiCPudl3
Parietal rhinal cortexipsiPaRH-0.5
Lateral parietal association cortexipsiLPtA-0.5
Medial parietal association cortexipsiMPtA-0.5
Parietal cortex posterior areaipsiParP-0.5
Lateral agranular prefrontal cortexipsiAGl-0.5
Anterior to the forelimb projection zone of the lateral agranular prefrontal cortex layer 2ipsiAGlAFL2-0.5
Anterior to the forelimb projection zone of the lateral agranular prefrontal cortex layer 3ipsiAGlAFL3-0.5
Anterior to the forelimb projection zone of the lateral agranular prefrontal cortex layer 4ipsiAGlAFL4-0.5
Anterior to the forelimb projection zone of the lateral agranular prefrontal cortex layer 5ipsiAGlAFL5-0.5
Medial agranular prefrontal cortexipsiAGm-0.5
Primary somatosensory cortex dysgranular region peripher partipsiS1DZpp-0.5
Primary somatosensory cortex lower lip regionipsiS1LL-0.5
Primary somatosensory cortex upper lip regionipsiS1ULp-0.5
Primary somatosensory cortex central intercalated zoneipsiS1iZce-0.5
Primary somatosensory cortex lateral part of the central intercalated zoneipsiS1iZLce-0.5
Primary somatosensory cortex lateral posterior part of the central intercalated zoneipsiS1iZLPce-0.5
Primary somatosensory cortex medial part of the central intercalated zoneipsiS1iZMce-0.5
Primary somatosensory cortex lateral intercalated zoneipsiS1iZL-0.5
Primary somatosensory cortex infragranular layersipsiS1Lig3
Primary somatosensory cortex supragranular layersipsiS1Lsg3
Primary somatosensory cortex forelimb region forepawipsiS1FP-0.5
Primary somatosensory cortex perigranular zoneipsiS1PZ-0.5
Secondary somatosensory cortexipsiS2-0.5
Spinal trigeminal nucleuscontraSp5nc3
Primary visual cortexcontraV13

Input from

NameSideAbbr.WeightDetails
ThalamusipsiT-0.5
Posterior thalamic nuclear groupipsiPo-0.5
Parietal rhinal cortexipsiPaRH-0.5
Lateral parietal association cortexipsiLPtA-0.5
Medial parietal association cortexipsiMPtA-0.5
Lateral agranular prefrontal cortexipsiAGl-0.5
Anterior to the forelimb projection zone of the lateral agranular prefrontal cortex layer 2ipsiAGlAFL2-0.5
Anterior to the forelimb projection zone of the lateral agranular prefrontal cortex layer 3ipsiAGlAFL3-0.5
Anterior to the forelimb projection zone of the lateral agranular prefrontal cortex layer 4ipsiAGlAFL4-0.5
Anterior to the forelimb projection zone of the lateral agranular prefrontal cortex layer 5ipsiAGlAFL5-0.5
Medial agranular prefrontal cortexipsiAGm-0.5
Primary somatosensory cortex dysgranular region anterior partipsiS1DZA3
Primary somatosensory cortex dysgranular region peripher partipsiS1DZpp-0.5
Primary somatosensory cortex lower lip regionipsiS1LL-0.5
Primary somatosensory cortex upper lip regionipsiS1ULp-0.5
Primary somatosensory cortex central intercalated zoneipsiS1iZce-0.5
Primary somatosensory cortex lateral part of the central intercalated zoneipsiS1iZLce-0.5
Primary somatosensory cortex lateral posterior part of the central intercalated zoneipsiS1iZLPce-0.5
Primary somatosensory cortex medial part of the central intercalated zoneipsiS1iZMce-0.5
Primary somatosensory cortex lateral intercalated zoneipsiS1iZL-0.5
Primary somatosensory cortex infragranular layersipsiS1Lig3
Primary somatosensory cortex supragranular layersipsiS1Lsg3
Primary somatosensory cortex forelimb region forepawipsiS1FP-0.5
Primary somatosensory cortex perigranular zoneipsiS1PZ-0.5
Secondary somatosensory cortexipsiS2-0.5
Ventrolateral thalamic nucleuscontraVL0.5
Primary visual cortexcontraV13
Medial geniculate nucleus medial partcontraMGM0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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