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Rat connectome



Ventrolateral thalamic nucleus right


Abbreviation
VL
Color       
Superior regionsVentral anterior-lateral complex of the thalamus

SynonymsAbbr.Language
Ventral lateral thalamic nucleus  
Ventrolateral regions of the thalamus Eng
Ventrolateral nucleus of thalamus  
Ventrolateral thalamic complex Eng
Ventrolateral nucleus Eng
Ventrolateral thalamic nucleustvlEng
Ventrolateral thalamic nucleusVLEng

SubregionsSide
Region between ventral posterolateral thalamic nucleus and ventroposterior lateral thalamic nucleusright
Ventrolateral thalamic nucleus caudal partright
Ventrolateral thalamic nucleus dorsal partright
Ventrolateral thalamic nucleus lateral mediodorsal partright
Ventrolateral thalamic nucleus medial partright
Ventrolateral thalamic nucleus oral partright
Ventrolateral thalamic nucleus posterior partright
Ventrolateral thalamic nucleus rostral partright
Ventrolateral thalamic nucleus rostromedial partright
Ventrolateral thalamic nucleus ventrolateral partright
Ventrolateral thalamic nucleus ventromedial partright
Caudomedial portion of the ventrolateral thalamic nucleusright
Ventrolateral thalamic nucleus centrocaudal partright
Ventrolateral thalamic nucleus dorsolateral partright
Ventrolateral thalamic nucleus ventral partright
Ventrolateral thalamic nucleus lateral partright
Ventrolateral thalamic nucleus caudoventral partright
Ventrolateral thalamic nucleus ventralmost aspectright
Ventrolateral thalamic nucleus caudodorsal partright
Central part of the ventrolateral thalamic nucleusright
Periphery of the ventrolateral thalamic nucleusright
Anterior part of the ventrolateral thalamic nucleusright
Anterodorsal part of the ventrolateral thalamic nucleusright
Ventrolateral thalamic nucleus anteroventral partright

Output to

NameSideAbbr.WeightDetails
Laterodorsal tegmental nucleuscontraLDTg2.5
Pedunculopontine tegmental nucleuscontraPPTg1
Ansiform lobule crus 1contraCrus11
Superior vestibular nucleuscontraSuVe3
Medial vestibular nucleuscontraMVe3
Nucleus of the solitary tractcontraSol-0.5
Submedius thalamic nucleus dorsal partcontraSubD2
Caudate putamencontraCPu1
Motoric regionscontraM0
Lateral agranular prefrontal cortexcontraAGl1
Jaw movement motor cortexcontraJMCx1
Whiskers motor cortexcontraWMCx-0.5
Whisker motor cortex subfieldscontraWMCxS1
Posteromedial barrel subfieldcontraPMBSF0.5
MesencephalonipsiMEC-0.5
Laterodorsal tegmental nucleusipsiLDTg2.5
Pedunculopontine tegmental nucleusipsiPPTg1
Middle cerebellar peduncleipsimcp-2
Superior cerebellar peduncleipsisucep-2
Locus coeruleusipsiLC1
Facial nucleusipsi72
Vestibular nucleiipsiVnc1
Superior vestibular nucleusipsiSuVe3
Medial vestibular nucleusipsiMVe3
Dorsal motor nucleus of vagusipsi10-1
ThalamusipsiT-0.5
Submedius thalamic nucleusipsiSub2
Ventral posterolateral thalamic nucleusipsiVPL-0.5
Ventral posterolateral thalamic nucleus caudal partipsiVPLca-0.5
Reticular thalamic nucleusipsiRt2
Reticular thalamic nucleus caudal partipsiRtc-10
Corpus callosumipsicc-2
Basal gangliaipsiBG3
Rostral part of claustrumipsiRCl1
Globus pallidusipsiGP1
Caudate putamenipsiCPu3
Dorsomedial striatumipsiCPudm1
Caudal striatumipsiCPuc1
Central striatumipsiCPuce2
Dorsal striatumipsiCPud1.5
Dorsocentral striatumipsiDCS2
Dorsolateral striatumipsiCPudl-0.5
Mediodorsal striatumipsiCPuMD-0.5
Mediolateral striatumipsiCPuml1
Rostral striatumipsiCPur2
Rostrocaudal striatumipsiCPurc1
Rostrocaudal region of the caudate putamenipsiRCCPu-0.5
Ventromedial striatumipsiCPuvm0
Lateral striatumipsiCPul3
Subthalamic nucleusipsiSTh1
Field CA1 of hippocampusipsiCA13
Lateral entorhinal cortexipsiLEnt0.5
Lateral entorhinal cortex lateral partipsiLEntLa0.5
Lateral entorhinal cortex medial partipsiLEntM0
Lateral entorhinal cortex intermediate partipsiLEnti0.5
Medial entorhinal cortexipsiMEnt0.5
Medial entorhinal cortex lateral partipsiMEntL0
Medial entorhinal field medial partipsiMEntFm0.5
Intermediate medial entorhinal cortexipsiMEntim0
Cingulate cortexipsiCg3
Anterior cingulate cortexipsiACC-0.5
Cingulate cortex area 1 caudal partipsiCg1c2
Cingulate cortex area 1 rostral partipsiCg1r2
Cingulate cortex area 2 caudal partipsiCg2c2
Cingulate area 2 layer 1ipsiCg2L14
Prelimbic cortexipsiPrL1
Infralimbic cortexipsiIL2
Frontal association cortexipsiFrA2
Rostral part of the dorsal part of frontal association cortexipsiFrARD-0.5
Caudal part of the dorsal part of frontal association cortexipsiFrACD-0.5
Frontal association cortex dorsal partipsiFrAd-0.5
Frontal association cortex lateral aspect layer 1ipsiFrALAL12.5
Frontal association cortex lateral aspect layer 3ipsiFrALAL32.5
Frontal association cortex lateral aspect layer 5ipsiFrALAL52.5
Frontal cortex area 1ipsiFr13
Frontal cortex area 2ipsiFr23
Frontal cortex area 2 anterior partipsiFr2a2
Frontal cortex area 2 caudal partipsiFr2C3
Frontal cortex area 2 rostral partipsiFr2R3
Frontal cortex area 3ipsiFr32
Parietal cortex posterior areaipsiParP2
Parietal cortex posterior area caudal part of the lateral portionipsiParPcL-0.5
Parietal cortex posterior area medial portionipsimPPC2
Parietal cortex posterior area rostrocaudal extent of the medial portionipsimrcPPC2
Parietal cortex posterior area ventral partipsiParPv1
Parietal cortex area 1ipsiPar12
Insular cortexipsiICX3
Agranular insular cortexipsiAI1.5
Perirhinal cortexipsiA351
Ectorhinal cortexipsiA362
Postrhinal cortexipsiPOR1.5
Medial sulcal areaipsiMeSA1
Somatomotoric regionsipsiSMR2
Motoric regionsipsiM3
Lateral agranular prefrontal cortexipsiAGl3
Caudal part of lateral agranular prefrontal cortexipsiAGlc3
Forelimb motor cortexipsiFMCx3
Caudal forelimb motor areaipsiCFMA4
Elbow flexion motor cortexipsiEFMCx3
Rostral forelimb motor areaipsiRFMA3
Lateral part of the granular cortex of forelimb motor regionsipsiLFMCx3
Hindlimb motor cortexipsiHMCx3
Ankle dorsiflexion motor cortexipsiADFMCx2
Ankle plantar flexion motor cortexipsiAPFMCx2
Hip flexion motor cortexipsiHFMCx1
Lateral agranular prefrontal cortex layer 1ipsiAGlL12
Lateral agranular prefrontal cortex layer 1aipsiAGlL1a1
Lateral agranular prefrontal cortex layer 2ipsiAGlL2-0.5
Lateral agranular prefrontal cortex layer 3ipsiAGlL32
Lateral agranular prefrontal cortex layer 4ipsiAGlL4-0.5
Lateral agranular prefrontal cortex layer 5ipsiAGlL52
Lateral agranular prefrontal cortex layer 6ipsiAGlL6-0.5
Rostral part of lateral agranular prefrontal cortexipsiAGlr2
Jaw movement motor cortexipsiJMCx2.5
Whiskers motor cortexipsiWMCx-0.5
Whisker motor cortex subfieldsipsiWMCxS2
Medial prefrontal cortexipsimPFC2
Medial agranular prefrontal cortexipsiAGm2
Medial agranular prefrontal cortex caudal part layer 1ipsicAGmL1-1
Medial agranular prefrontal cortex layer 1ipsiAGmL12
Medial agranular prefrontal cortex layer 2ipsiAGmL21
Medial agranular prefrontal cortex layer 2 pyramidal cellsipsiAGmL2py-0.5
Medial agranular prefrontal cortex layer 3ipsiAGmL32
Medial agranular prefrontal cortex lower part of layer 3ipsiAGmLL31
Medial agranular prefrontal cortex lower part of layer 3 pyramidal cellsipsiAGmLL3py-0.5
Medial agranular prefrontal cortex layer 4ipsiAGmL41
Medial agranular prefrontal cortex layer 5ipsiAGmL52
Medial agranular prefrontal cortex layer 5 bipsiAGmL5b1
Crossed corticostriatal cellsipsiCCS-0.5
Medial agranular prefrontal cortex rostral partipsirAGm1
Medial agranular prefrontal cortex rostral part layer 1ipsirAGmL1-1
Posterior part of the medial agranular prefrontal cortexipsiPoAGm1
Primary somatosensory cortexipsiS13
Primary somatosensory cortex barrel fieldipsiS1BF2
Posteromedial barrel subfield C3ipsiPMBSFC3-0.5
Caudal whisker areaipsiCS1BF1.5
Rostral whisker areaipsiRS1BF2
Primary somatosensory cortex jaw regionipsiS1J-0.5
Primary somatosensory cortex layer 5ipsiS1L5-0.5
Primary somatosensory cortex forelimb regionipsiS1FL3
Primary somatosensory cortex forelimb region rostral partipsiS1FLR3
Primary somatosensory cortex hindlimb regionipsiS1HL3
Primary somatosensory cortex hindlimb region caudal partipsiS1HLC3
Primary somatosensory cortex trunk regionipsiS1Tr2
Primary somatosensory cortex rostral partipsiS1r0
Dorsolateral part of the primary somatosensory cortexipsiS1DL-0.5
Secondary somatosensory cortexipsiS23
Visual regionsipsiVR3
Primary visual cortexipsiV11
Secondary visual cortex medial areaipsiV2M1
Secondary visual cortex lateral areaipsiV2L1
Orbital cortexipsiOrC-0.5
Medial orbital cortexipsiMO2
Ventral orbital cortexipsiVO2
Ventrolateral orbital areaipsiVLO2
Ventral lateral geniculate nucleusipsiVLG0.5
Ventral lateral geniculate nucleus magnocellular partipsiVLGMC0
Ventral lateral geniculate nucleus parvicellular partipsiVLGPC0
Flexor digitorum muscleipsiMuscFD2
Biceps femoris muscleipsiMuscBF1
Tibialis anterior muscleipsiMuscTA2
Gastrocnemius muscleipsiMuscGC2

Input from

NameSideAbbr.WeightDetails
Central gray mesencephalic partcontraCGM-0.5
Substantia nigra reticular part dorsolateral tiercontraSNRDL0.5
Laterodorsal tegmental nucleuscontraLDTg0.5
Dorsal tegmental nucleuscontraDTg2
Pedunculopontine tegmental nucleus pars compactacontraPPNC0.5
Cerebellar nucleicontraDCeN3
Dorsolateral humpcontraCERcndl2
Dorsomedial crestcontraCERcndm1
Deep cerebellar nucleicontraDNC-0.5
Interposed cerebellar nucleicontraICN2
Anterior interposed nucleuscontraAIN3
Posterior interposed nucleuscontraCERpin2
Lateral cerebellar nucleuscontraCERL3
Lateral cerebellar nucleus caudal partcontraCERLc3
Lateral cerebellar nucleus lateral partcontraCERLL3
Lateral cerebellar nucleus parvicellular partcontraLatPC1
Lateral cerebellar nucleus rostral partcontraCERLr2
Lateral cerebellar nucleus ventral partcontraCERLV3
Medial cerebellar nucleuscontraMed3
Medial cerebellar nucleus caudal partcontraMedc2
Medial cerebellar nucleus centromedial partcontraCMMed1
Medial cerebellar nucleus middle subdivisioncontraMMCM1
Dorsolateral protuberancecontraDLPr1
Locus coeruleuscontraLC2
Locus coeruleus pars principaliscontraLCpp2
Locus coeruleus rostral partcontraLCRo2
Prepositus nucleuscontraPr3
Lateral parabrachial nucleuscontraLPB-0.5
Lateral reticular nucleuscontraLRt-0.5
Medullary reticular nucleus dorsal partcontraMdDd2
Mesencephalic trigeminal nucleus caudal polecontraMe5cp3
Principal sensory trigeminal nucleuscontraPr54
Spinal trigeminal nucleuscontraSp5nc1
Spinal trigeminal nucleus caudal partcontraSp5C0.5
Spinal trigeminal nucleus interpolar partcontraSp5I3
Spinal trigeminal nucleus oral partcontraSp5O1
Spinal vestibular nucleuscontraSpVe1
Medial vestibular nucleuscontraMVe-0.5
Medial vestibular nucleus caudal partcontraMVeP3
Inferior vestibular nucleuscontraIVN-0.5
Nucleus of the solitary tractcontraSol1
Dorsal raphe nucleus dorsal partcontraDRD1.5
Dorsal raphe nucleus rostral partcontraDRr1
Dorsal raphe nucleus ventral partcontraDRV1.5
Rostral ventrolateral medullacontraRVLM-0.5
Caudoventral reticular nucleuscontraCVL-0.5
Dorsal column nucleicontraDCN2
Cuneate nucleuscontraCu3
Dorsal column nuclei caudal partcontraDCNc1
Dorsal column nuclei middle partcontraDCNm3
Dorsal column nuclei rostral partcontraDCNr1
GracilecontraGra3
Nucleus of BischoffcontraNBi0.5
Lateral paragigantocellular nucleuscontraLPGi0.5
Tuberal nucleuscontraTU-0.5
Reticular thalamic nucleuscontraRt2
Medial amygdaloid nucleuscontraMe0.5
Globus palliduscontraGP0
Medial globus palliduscontraMGP-0.5
Caudate putamencontraCPu0
Dentate gyruscontraDG-0.5
Anterior cingulate cortexcontraACC1
Frontal association cortexcontraFrA2
Frontal cortex area 2contraFr21
Parietal association cortexcontraPtA0
Agranular insular cortexcontraAI1
Dorsal part of the granular insular cortex rostroventrally adjacent to the rostralmost part of S2contradGlrvs20
Lateral agranular prefrontal cortexcontraAGl1
Jaw movement motor cortexcontraJMCx1
Whisker motor cortex subfieldscontraWMCxS1
Medial agranular prefrontal cortexcontraAGm1
Primary somatosensory cortex hindlimb regioncontraS1HL2
Lateral septal nucleuscontraLS0.5
Internal basilar nucleus C1contraIBC1-0.5
Spinal cord layer 1 C1contraSCL1C1-0.5
Intermediate zone C1contraizVHC1-0.5
Internal basilar nucleus C2contraIBC2-0.5
Spinal cord layer 1 C2contraSCL1C2-0.5
Intermediate zone C2contraizVHC2-0.5
Intermediate zone C3contraizVHC3-0.5
Intermediate zone C4contraizVHC4-0.5
Intermediate zone C5contraizVHC5-0.5
Spinal cord layer 5 C6contraSCL5C63
Spinal cord layer 4 C6contraSCL4C63
Spinal cord layer 1 C6contraSCL1C63
Intermediate zone C6contraizVHC6-0.5
Spinal cord layer 5 C7contraSCL5C73
Spinal cord layer 4 C7contraSCL4C73
Spinal cord layer 1 C7contraSCL1C73
Intermediate zone C7contraizVHC7-0.5
Spinal cord layer 5 C8contraSCL5C83
Spinal cord layer 4 C8contraSCL4C83
Spinal cord layer 1 C8contraSCL1C83
Intermediate zone C8contraizVHC8-0.5
Intermediate zone T1contraizVHT1-0.5
Intermediate zone T2contraizVHT2-0.5
Intermediate zone T3contraizVHT3-0.5
Intermediate zone T4contraizVHT4-0.5
Spinal cord layer 5 T5contraSCL5T53
Spinal cord layer 4 T5contraSCL4T53
Spinal cord layer 1 T5contraSCL1T53
Intermediate zone T5contraizVHT5-0.5
Spinal cord layer 5 T6contraSCL5T63
Spinal cord layer 4 T6contraSCL4T63
Spinal cord layer 1 T6contraSCL1T63
Intermediate zone T6contraizVHT6-0.5
Spinal cord layer 5 T7contraSCL5T73
Spinal cord layer 4 T7contraSCL4T73
Spinal cord layer 1 T7contraSCL1T73
Intermediate zone T7contraizVHT7-0.5
Intermediate zone T8contraizVHT8-0.5
Intermediate zone T9contraizVHT9-0.5
Intermediate zone T10contraizVHT10-0.5
Intermediate zone T11contraizVHT11-0.5
Intermediate zone T12contraizVHT12-0.5
Intermediate zone T13contraizVHT13-0.5
Lateral spinal nucleus L1contraLSpL13
Spinal cord layer 3 L1contraSCL3L13
Spinal cord layer 1 L1contraSCL1L13
Lateral spinal nucleus L2contraLSpL23
Spinal cord layer 3 L2contraSCL3L23
Spinal cord layer 1 L2contraSCL1L23
Lateral spinal nucleus L3contraLSpL33
Spinal cord layer 5 L3contraSCL5L33
Spinal cord layer 3 L3contraSCL3L33
Spinal cord layer 4 L3contraSCL4L33
Spinal cord layer 1 L3contraSCL1L33
Intermediate zone L3contraizVHL3-0.5
Spinal cord layer 7 L3contraSCL7L3-0.5
Spinal cord layer 8 L3contraSCL8L3-0.5
Lateral spinal nucleus L4contraLSpL43
Spinal cord layer 5 L4contraSCL5L43
Spinal cord layer 3 L4contraSCL3L43
Spinal cord layer 4 L4contraSCL4L43
Spinal cord layer 1 L4contraSCL1L43
Intermediate zone L4contraizVHL4-0.5
Spinal cord layer 7 L4contraSCL7L4-0.5
Spinal cord layer 8 L4contraSCL8L4-0.5
Lateral spinal nucleus L5contraLSpL53
Spinal cord layer 5 L5contraSCL5L53
Spinal cord layer 3 L5contraSCL3L53
Spinal cord layer 4 L5contraSCL4L53
Spinal cord layer 1 L5contraSCL1L53
Intermediate zone L5contraizVHL5-0.5
Spinal cord layer 7 L5contraSCL7L5-0.5
Spinal cord layer 8 L5contraSCL8L5-0.5
Lateral spinal nucleus L6contraLSpL63
Spinal cord layer 3 L6contraSCL3L63
Spinal cord layer 1 L6contraSCL1L63
Intermediate zone L6contraizVHL6-0.5
Spinal cord layer 7 L6contraSCL7L6-0.5
Spinal cord layer 8 L6contraSCL8L6-0.5
Spinal cord layer 5 S1contraSCL5S13
Spinal cord layer 4 S1contraSCL4S13
Spinal cord layer 1 S1contraSCL1S13
Spinal cord layer 5 S2contraSCL5S23
Spinal cord layer 4 S2contraSCL4S23
Spinal cord layer 1 S2contraSCL1S23
Spinal cord layer 5 S3contraSCL5S33
Spinal cord layer 4 S3contraSCL4S33
Spinal cord layer 1 S3contraSCL1S33
Central grayipsiCG1
Central gray mesencephalic partipsiCGM1
Ventral periaqueductal grayipsiVPAG0
Periventricular gray matteripsiPVG0
Superior colliculusipsiSC0.5
Central tegmental fieldipsiTGAC1
Midbrain extrapyramidal areaipsiMEA1
Peduncularpontine nucleus caudal levelsipsiPPNCa-0.5
Ventral midbrain tegmentumipsiVeMT-0.5
Substantia nigra A9ipsiSN1.5
Substantia nigra compact part ventral tieripsiSNCV2
Substantia nigra reticular partipsiSNR3
Substantia nigra reticular part caudal tieripsiSNRca1
Substantia nigra reticular part dorsolateral tieripsiSNRDL1.5
Substantia nigra reticular part rostral tieripsiSNRro1
Caudal linear nucleus of the rapheipsiCLi2
Retrorubral nucleusipsiRR1
Laterodorsal tegmental nucleusipsiLDTg3
Laterodorsal tegmental nucleus medial partipsiLDTgM-0.5
Laterodorsal tegmental nucleus rostral partipsiLDTgR-0.5
Dorsal tegmental nucleusipsiDTg2
Pedunculopontine tegmental nucleusipsiPPTg3
Pedunculopontine tegmental nucleus medial partipsiPPTgM-0.5
Pedunculopontine tegmental nucleus pars compactaipsiPPNC3
Pedunculopontine tegmental nucleus pars dissipataipsiPPNd1
Pedunculopontine tegmental nucleus rostral partipsiPPTgR-0.5
Edinger Westphal nucleusipsiEW1
CerebellumipsiCERE3
Dorsolateral humpipsiCERcndl0
Deep cerebellar nucleiipsiDNC2.5
Interposed cerebellar nucleiipsiICN2
Anterior interposed nucleusipsiAIN0
Lateral interposed cerebellar nucleusipsiICNL2
Posterior interposed nucleusipsiCERpin0
Lateral cerebellar nucleusipsiCERL2
Lateral cerebellar nucleus caudal partipsiCERLc1
Lateral cerebellar nucleus rostral partipsiCERLr0.5
Medial cerebellar nucleusipsiMed1
Locus coeruleusipsiLC3
Locus coeruleus ventral portion of the rostral poleipsiLCVRo2
Locus coeruleus ventral partipsiLCv2
Locus coeruleus pars principalisipsiLCpp2
Nucleus incertus pars compactaipsiNIc0
Prepositus nucleusipsiPr2
Medial reticular formationipsiRFm-0.5
Nucleus reticular ventralis pars betaipsiRVb1
Nucleus reticularis ventralis pars alphaipsiRVa1
Mesencephalic reticular formationipsiMRF-0.5
Nucleus reticularis subcuneiformisipsiRScf3
Pontine reticular nucleusipsiPRN3
Pontine reticular nucleus oral partipsiPnO-0.5
Pontine reticular nucleus oral part medial partipsiPnOm1
Pontine reticular nucleus caudal partipsiPNC-0.5
Pontine reticular nucleus caudal part betaipsiPnOcb3
Cuneiforme nucleusipsiCnF3
Horizontal band of labeled nucleus reticularis cuneiformisipsiCnFHo1
Parabrachial nucleusipsiPB3
Lateral parabrachial nucleusipsiLPB-0.5
Gigantocellular reticular nucleusipsiGi-0.5
Lateral reticular nucleusipsiLRt-0.5
Medullary reticular nucleus dorsal partipsiMdDd1
Subcoeruleus nucleusipsiSubC1
MyelencephalonipsiMYC-0.5
Principal sensory trigeminal nucleusipsiPr52
Spinal trigeminal nucleus caudal partipsiSp5C2
Spinal trigeminal nucleus interpolar partipsiSp5I1.5
Spinal trigeminal nucleus interpolar part rostralipsiSp5Ir-0.5
Spinal trigeminal nucleus oral partipsiSp5O0.5
Anterior part of spinal trigeminal nucleus oral partipsiSp5OA2
Ventrolateral of the trigeminal subnucleus caudalisipsi5SSCVL-0.5
Spinal vestibular nucleusipsiSpVe2
Vestibular nucleiipsiVnc3
Superior vestibular nucleusipsiSuVe1
Medial vestibular nucleusipsiMVe-0.5
Medial vestibular nucleus caudal partipsiMVeP1
Medial vestibular nucleus intermediate partipsiMVei1
Lateral vestibular nucleusipsiLVe2
Lateral third of the rostral half of the lateral vestibular nucleusipsiLVeRL2
Inferior vestibular nucleusipsiIVN-0.5
Nucleus of the solitary tractipsiSol-0.5
Raphe nucleiipsiRAN0.5
Dorsal raphe nucleusipsiDR2
Dorsal raphe nucleus dorsal partipsiDRD3
Dorsal raphe nucleus rostral partipsiDRr1.5
Dorsal raphe nucleus ventral partipsiDRV3
Median raphe nucleusipsiMnR1.5
Pontine raphe nucleusipsiPnR0
Raphe magnus nucleusipsiRMg0
Rostral ventrolateral medullaipsiRVLM-0.5
Caudoventral reticular nucleusipsiCVL-0.5
Dorsal column nucleiipsiDCN2
Cuneate nucleusipsiCu1.5
Cuneate nucleus caudal partipsiCuC2
Cuneate nucleus rostral partipsiCuRo2
Middle part of cuneate nucleusipsiCuM2
GracileipsiGra2
Nucleus of BischoffipsiNBi2
Dorsal paragigantocellular nucleusipsiDPGi-0.5
Lateral paragigantocellular nucleusipsiLPGi3
Caudal part of the paragigantocellular reticular nucleusipsiCPGi1
Spinomedullary junctionipsiSMJ3
Basal nucleus MeynertipsiB0.5
Tuberomammillary nucleusipsiTuM0.5
Tuberomammillary nucleus lateral partipsiTuML1
Lateral hypothalamic areaipsiLH1.5
Lateral hypothalamic area perifornical partipsiPFx1
Tuberal nucleusipsiTU-0.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM1
Posterior hypothalamic nucleus caudal partipsiPHCa2
Posterior hypothalamic nucleus rostral partipsiPHRo1
Anterolateral regionipsiMMna1
Supramammillar nucleus lateral part lateral subpartipsiSuMLL0
Supramammillar nucleus lateral part medial subpartipsiSuMLM2
Supramammillar nucleus medial partipsiSuMM0
Dorsal thalamusipsiDOR1
Centrolateral thalamic nucleusipsiCL-0.5
Paracentral thalamic nucleusipsiPC2
Central part of the intralaminar nucleus of the thalamusipsiILMce2
Lateral group of the dorsal thalamusipsiLAT-2
Reuniens thalamic nucleusipsiRe2.5
Reuniens thalamic nucleus medial partipsiReMe2.5
Reuniens thalamic nucleus ventral partipsiReV2.5
Subfornical organipsiSFO3
Ventral aspect of caudal ventrolateral thalamic nucleusipsiVLvC2.5
Ventromedial thalamic nucleusipsiVM-2
Intralaminar nucleiipsiILN2
Centrolateral intralaminar nucleusipsiCLILN2
Rostral thalamusipsiRoT1
Reticular thalamic nucleusipsiRt2
Reticular thalamic nucleus anterior partipsiRtA2
Reticular thalamic nucleus anteroventral partipsiRtAV2
Reticular thalamic nucleus medial partipsiRtm1
Reticular thalamic nucleus rostral partipsiRtr2
Lateral habenular nucleusipsiLHb0
Pretectal regionipsiPRT2
Amygdaloid complexipsiAC3
Posterolateral cortical nucleusipsiPLCo-0.5
Medial amygdaloid nucleusipsiMe3
Globus pallidusipsiGP3
Medial globus pallidusipsiMGP4
Medial globus pallidus caudal one-thirdipsiMGPcot3
Medial globus pallidus rostral partipsiMGPr0
Globus pallidus outer neuronsipsiGPon-0.5
Globus pallidus inner neruonsipsiGPin-0.5
Caudate putamenipsiCPu3
Dorsocentral striatumipsiDCS2
Lateral part of the middle caudate putamenipsiCPuMiL-0.5
Cerebral cortexipsiCEC-0.5
Dentate gyrusipsiDG3
SubiculumipsiS-0.5
Subiculum posterior partipsiSupo-0.5
Retrosplenial cortexipsiRSCx-0.5
Cerebral cortex layer 1ipsiCCL12
Anterior cingulate cortexipsiACC3
Cingulate cortex area 1 caudal partipsiCg1c1.5
Cingulate cortex area 2 caudal partipsiCg2c1.5
Prelimbic cortex dorsal partipsiPrLd0.5
Prelimbic cortex ventral partipsiPrLv0
Infralimbic cortexipsiIL0
Frontal association cortexipsiFrA2
Frontal cortex area 2ipsiFr23
Frontal cortex area 3 layer 5ipsiFr3L53
Frontal cortex area 3 layer 6ipsiFr3L63
Parietal association cortexipsiPtA2
Parietal cortex posterior areaipsiParP-0.5
Parietal cortex posterior area lateral portionipsiParPL-0.5
Parietal cortex posterior area caudomedial part of the lateral portionipsiParPcmL1
Parietal cortex posterior area medial portionipsimPPC-0.5
Parietal cortex ventral area caudal partipsiParVC2
Agranular insular cortexipsiAI3
Agranular insular cortex ventral part jaw movement areaipsiAIVjm-0.5
Dorsal part of the granular insular cortex rostroventrally adjacent to the rostralmost part of S2ipsidGlrvs21
Somatomotoric regionsipsiSMR-0.5
Motoric regionsipsiM-0.5
Lateral prefrontal cortexipsilPFC-2
Lateral agranular prefrontal cortexipsiAGl3
Forelimb motor cortexipsiFMCx4
Caudal forelimb motor areaipsiCFMA2
Elbow motor areaipsiEBMA-0.5
Rostral forelimb motor areaipsiRFMA2
Wrist motor cortexipsiWrMCx0.5
Hindlimb motor cortexipsiHMCx4
Hindlimb motor cortex layer 5ipsiHMCxL5-0.5
Hindlimb motor cortex layer 6ipsiHMCxL6-0.5
Knee motor cortexipsiKHMCx2
Ankle motor areaipsiAHMCx1
Lateral agranular prefrontal cortex layer 5ipsiAGlL53
Lateral agranular prefrontal cortex layer 6ipsiAGlL63
Lateral agranular prefrontal cortex layer 6aipsiAGlL6a3
Lateral agranular prefrontal cortex layer 6bipsiAGlL6b0.5
Rostral part of lateral agranular prefrontal cortexipsiAGlr2
Rostral part of lateral agranular prefrontal cortex layer 5ipsiAGlrL5-2
Rostrolateral part of the lateral agranular prefrontal cortexipsiAGlRL-0.5
Orofacial motor cortexipsiOFCx2
Jaw movement motor cortexipsiJMCx2.5
Whisker motor cortex subfieldsipsiWMCxS2
Rostromedial border of the lateral agranular prefrontal cortexipsiAGlrm-0.5
Motoric regions layer 5ipsiMRL52
Motoric regions layer 6ipsiMRL62
Medial agranular prefrontal cortexipsiAGm3
Medial agranular prefrontal cortex caudal partipsicAGm3
Medial agranular prefrontal cortex medial partipsimAGm1
Medial agranular prefrontal cortex rostral partipsirAGm3
Medial agranular prefrontal cortex rostral part layer 5ipsirAGmL5-2
Posterior part of the medial agranular prefrontal cortexipsiPoAGm1
Sensory regionsipsiSR2
Primary somatosensory cortexipsiS12
Posteromedial barrel subfield A1 layer 5ipsiPMBSFA1L5-0.5
Posteromedial barrel subfield A1 layer 6ipsiPMBSFA1L6-0.5
Posteromedial barrel subfield A1 layer 6 lower partipsiPMBSFA1L6L-0.5
Posteromedial barrel subfield A2 layer 5ipsiPMBSFA2L5-0.5
Posteromedial barrel subfield A2 layer 6ipsiPMBSFA2L6-0.5
Posteromedial barrel subfield A2 layer 6 lower partipsiPMBSFA2L6L-0.5
Posteromedial barrel subfield A3 layer 5ipsiPMBSFA3L5-0.5
Posteromedial barrel subfield A3 layer 6ipsiPMBSFA3L6-0.5
Posteromedial barrel subfield A3 layer 6 lower partipsiPMBSFA3L6L-0.5
Posteromedial barrel subfield A4 layer 5ipsiPMBSFA4L5-0.5
Posteromedial barrel subfield A4 layer 6ipsiPMBSFA4L6-0.5
Posteromedial barrel subfield A4 layer 6 lower partipsiPMBSFA4L6L-0.5
Posteromedial barrel subfield B1 layer 5ipsiPMBSFB1L5-0.5
Posteromedial barrel subfield B1 layer 6ipsiPMBSFB1L6-0.5
Posteromedial barrel subfield B1 layer 6 lower partipsiPMBSFB1L6L-0.5
Posteromedial barrel subfield B2 layer 5ipsiPMBSFB2L5-0.5
Posteromedial barrel subfield B2 layer 6ipsiPMBSFB2L6-0.5
Posteromedial barrel subfield B2 layer 6 lower partipsiPMBSFB2L6L-0.5
Posteromedial barrel subfield B3 layer 5ipsiPMBSFB3L5-0.5
Posteromedial barrel subfield B3 layer 6ipsiPMBSFB3L6-0.5
Posteromedial barrel subfield B3 layer 6 lower partipsiPMBSFB3L6L-0.5
Posteromedial barrel subfield B4 layer 5ipsiPMBSFB4L5-0.5
Posteromedial barrel subfield B4 layer 6ipsiPMBSFB4L6-0.5
Posteromedial barrel subfield B4 layer 6 lower partipsiPMBSFB4L6L-0.5
Posteromedial barrel subfield C1 layer 5ipsiPMBSFC1L5-0.5
Posteromedial barrel subfield C1 layer 6ipsiPMBSFC1L6-0.5
Posteromedial barrel subfield C1 layer 6 lower partipsiPMBSFC1L6L-0.5
Posteromedial barrel subfield C2 layer 5ipsiPMBSFC2L5-0.5
Posteromedial barrel subfield C2 layer 6ipsiPMBSFC2L6-0.5
Posteromedial barrel subfield C2 layer 6 lower partipsiPMBSFC2L6L-0.5
Posteromedial barrel subfield C3 layer 5ipsiPMBSFC3L5-0.5
Posteromedial barrel subfield C3 layer 6ipsiPMBSFC3L6-0.5
Posteromedial barrel subfield C3 layer 6 lower partipsiPMBSFC3L6L-0.5
Posteromedial barrel subfield C4 layer 5ipsiPMBSFC4L5-0.5
Posteromedial barrel subfield C4 layer 6ipsiPMBSFC4L6-0.5
Posteromedial barrel subfield C4 layer 6 lower partipsiPMBSFC4L6L-0.5
Posteromedial barrel subfield C5 layer 5ipsiPMBSFC5L5-0.5
Posteromedial barrel subfield C5 layer 6ipsiPMBSFC5L6-0.5
Posteromedial barrel subfield C5 layer 6 lower partipsiPMBSFC5L6L-0.5
Posteromedial barrel subfield D1 layer 5ipsiPMBSFD1L5-0.5
Posteromedial barrel subfield D1 layer 6ipsiPMBSFD1L6-0.5
Posteromedial barrel subfield D1 layer 6 lower partipsiPMBSFD1L6L-0.5
Posteromedial barrel subfield D2 layer 5ipsiPMBSFD2L5-0.5
Posteromedial barrel subfield D2 layer 6ipsiPMBSFD2L6-0.5
Posteromedial barrel subfield D2 layer 6 lower partipsiPMBSFD2L6L-0.5
Posteromedial barrel subfield D3 layer 5ipsiPMBSFD3L5-0.5
Posteromedial barrel subfield D3 layer 6ipsiPMBSFD3L6-0.5
Posteromedial barrel subfield D3 layer 6 lower partipsiPMBSFD3L6L-0.5
Posteromedial barrel subfield D4 layer 5ipsiPMBSFD4L5-0.5
Posteromedial barrel subfield D4 layer 6ipsiPMBSFD4L6-0.5
Posteromedial barrel subfield D4 layer 6 lower partipsiPMBSFD4L6L-0.5
Posteromedial barrel subfield D5 layer 5ipsiPMBSFD5L5-0.5
Posteromedial barrel subfield D5 layer 6ipsiPMBSFD5L6-0.5
Posteromedial barrel subfield D5 layer 6 lower partipsiPMBSFD5L6L-0.5
Posteromedial barrel subfield D6 layer 5ipsiPMBSFD6L5-0.5
Posteromedial barrel subfield D6 layer 6ipsiPMBSFD6L6-0.5
Posteromedial barrel subfield D6 layer 6 lower partipsiPMBSFD6L6L-0.5
Posteromedial barrel subfield E1 layer 5ipsiPMBSFE1L5-0.5
Posteromedial barrel subfield E1 layer 6ipsiPMBSFE1L6-0.5
Posteromedial barrel subfield E1 layer 6 lower partipsiPMBSFE1L6L-0.5
Posteromedial barrel subfield E2 layer 5ipsiPMBSFE2L5-0.5
Posteromedial barrel subfield E2 layer 6ipsiPMBSFE2L6-0.5
Posteromedial barrel subfield E2 layer 6 lower partipsiPMBSFE2L6L-0.5
Posteromedial barrel subfield E3 layer 5ipsiPMBSFE3L5-0.5
Posteromedial barrel subfield E3 layer 6ipsiPMBSFE3L6-0.5
Posteromedial barrel subfield E3 layer 6 lower partipsiPMBSFE3L6L-0.5
Posteromedial barrel subfield E4 layer 5ipsiPMBSFE4L5-0.5
Posteromedial barrel subfield E4 layer 6ipsiPMBSFE4L6-0.5
Posteromedial barrel subfield E4 layer 6 lower partipsiPMBSFE4L6L-0.5
Posteromedial barrel subfield E5 layer 5ipsiPMBSFE5L5-0.5
Posteromedial barrel subfield E5 layer 6ipsiPMBSFE5L6-0.5
Posteromedial barrel subfield E5 layer 6 lower partipsiPMBSFE5L6L-0.5
Posteromedial barrel subfield E6 layer 5ipsiPMBSFE6L5-0.5
Posteromedial barrel subfield E6 layer 6ipsiPMBSFE6L6-0.5
Posteromedial barrel subfield E6 layer 6 lower partipsiPMBSFE6L6L-0.5
Posteromedial barrel subfield E7 layer 5ipsiPMBSFE7L5-0.5
Posteromedial barrel subfield E7 layer 6ipsiPMBSFE7L6-0.5
Posteromedial barrel subfield E7 layer 6 lower partipsiPMBSFE7L6L-0.5
Primary somatosensory cortex caudomedial partipsiS1CM-0.5
Primary somatosensory cortex face regionipsiS1FR3
Primary somatosensory cortex layer 5ipsiS1L53
Primary somatosensory cortex layer 6ipsiS1L63
Primary somatosensory cortex forelimb regionipsiS1FL2
Primary somatosensory cortex hindlimb regionipsiS1HL2
Primary somatosensory cortex hindlimb region layer 5ipsiS1HL51
Primary somatosensory cortex hindlimb region layer 6ipsiS1HL62
Primary somatosensory cortex rostral partipsiS1r1
Secondary somatosensory cortex layer 5ipsiS2L53
Secondary somatosensory cortex layer 6ipsiS2L63
Rostral forelimb area of SmithipsiRFA-0.5
Primary visual cortexipsiV1-0.5
Primary visual cortex layer 5ipsiV1L53
Primary visual cortex layer 6ipsiV1L63
Secondary visual cortex medial area layer 5ipsiV2ML53
Secondary visual cortex medial area layer 6ipsiV2ML63
Secondary visual cortex lateral area layer 5ipsiV2LL53
Secondary visual cortex lateral area layer 6ipsiV2LL63
Orbital cortexipsiOrC2
Posterior orbital cortexipsiOrCP2
Ventral lateral geniculate nucleusipsiVLG0.5
Ventral lateral geniculate nucleus magnocellular partipsiVLGMC0
Ventral lateral geniculate nucleus parvicellular partipsiVLGPC0
Lateral septal nucleusipsiLS3
Cervical segment 1ipsiCS1-3
Intermediomedial cell column C1ipsiIMMC1-3
Lateral cervical nucleus C1ipsiLatCC1-3
Lateral spinal nucleus C1ipsiLSpC1-3
Area X C1ipsiSCL10C1-3
Dorsal horn C1ipsiDHC1-3
Spinal cord layer 1 C1ipsiSCL1C1-0.5
Cervical segment 2ipsiCS2-3
Intermediomedial cell column C2ipsiIMMC2-3
Lateral cervical nucleus C2ipsiLatCC2-3
Lateral spinal nucleus C2ipsiLSpC2-3
Area X C2ipsiSCL10C2-3
Dorsal horn C2ipsiDHC2-3
Spinal cord layer 1 C2ipsiSCL1C2-0.5
Cervical segment 4ipsiCS4-3
Intermediomedial cell column C4ipsiIMMC4-3
Lateral cervical nucleus C4ipsiLatCC4-3
Lateral spinal nucleus C4ipsiLSpC4-3
Area X C4ipsiSCL10C4-3
Dorsal horn C4ipsiDHC4-3
Spinal cord layer 1 C4ipsiSCL1C4-3
Cervical segment 5ipsiCS5-3
Intermediomedial cell column C5ipsiIMMC5-3
Lateral cervical nucleus C5ipsiLatCC5-3
Lateral spinal nucleus C5ipsiLSpC5-3
Area X C5ipsiSCL10C5-3
Dorsal horn C5ipsiDHC5-3
Spinal cord layer 1 C5ipsiSCL1C5-0.5
Spinal cord layer 5 C6ipsiSCL5C61
Spinal cord layer 4 C6ipsiSCL4C61
Spinal cord layer 1 C6ipsiSCL1C61
Cervical segment 7ipsiCS7-3
Intermediomedial cell column C7ipsiIMMC7-3
Lateral cervical nucleus C7ipsiLatCC7-3
Lateral spinal nucleus C7ipsiLSpC7-3
Area X C7ipsiSCL10C7-3
Dorsal horn C7ipsiDHC7-3
Spinal cord layer 5 C7ipsiSCL5C71
Spinal cord layer 6 C7ipsiSCL6C70.5
Spinal cord layer 3 C7ipsiSCL3C70
Spinal cord layer 4 C7ipsiSCL4C71
Spinal cord layer 1 C7ipsiSCL1C71
Spinal cord layer 2 C7ipsiSCL2C70
Spinal cord layer 7 C7ipsiSCL7C70.5
Cervical segment 8ipsiCS8-3
Intermediomedial cell column C8ipsiIMMC8-3
Lateral cervical nucleus C8ipsiLatCC8-3
Lateral spinal nucleus C8ipsiLSpC8-3
Area X C8ipsiSCL10C8-3
Dorsal horn C8ipsiDHC8-3
Spinal cord layer 5 C8ipsiSCL5C81
Spinal cord layer 4 C8ipsiSCL4C81
Spinal cord layer 1 C8ipsiSCL1C81
Thoracal segment 4ipsiT4-3
Intermediomedial cell column T4ipsiIMMT4-3
Lateral spinal nucleus T4ipsiLSpT4-3
Area X T4ipsiSCL10T4-3
Dorsal horn T4ipsiDHT4-3
Spinal cord layer 1 T4ipsiSCL1T4-3
Spinal cord layer 5 T5ipsiSCL5T51
Spinal cord layer 4 T5ipsiSCL4T51
Spinal cord layer 1 T5ipsiSCL1T51
Thoracal segment 6ipsiT60.5
Spinal cord layer 5 T6ipsiSCL5T61
Spinal cord layer 4 T6ipsiSCL4T61
Spinal cord layer 1 T6ipsiSCL1T61
Thoracal segment 7ipsiT70.5
Spinal cord layer 5 T7ipsiSCL5T71
Spinal cord layer 1 T7ipsiSCL1T71
Spinal cord layer 4 T7ipsiSCL4T71
Thoracal segment 8ipsiT80.5
Intermediomedial cell column T8ipsiIMMT8-3
Lateral spinal nucleus T8ipsiLSpT8-3
Area X T8ipsiSCL10T8-3
Dorsal horn T8ipsiDHT8-3
Spinal cord layer 1 T8ipsiSCL1T8-3
Thoracal segment 9ipsiT90.5
Thoracal segment 12ipsiT12-3
Intermediomedial cell column T12ipsiIMMT12-3
Lateral spinal nucleus T12ipsiLSpT12-3
Area X T12ipsiSCL10T12-3
Dorsal horn T12ipsiDHT12-3
Spinal cord layer 1 T12ipsiSCL1T12-3
Lumbar segment 1ipsiL1-3
Intermediomedial cell column L1ipsiIMML1-3
Lateral spinal nucleus L1ipsiLSpL11
Area X L1ipsiSCL10L1-3
Dorsal horn L1ipsiDHL1-3
Spinal cord layer 3 L1ipsiSCL3L11
Spinal cord layer 1 L1ipsiSCL1L11
Lumbar segment 2ipsiL2-3
Intermediomedial cell column L2ipsiIMML2-3
Lateral spinal nucleus L2ipsiLSpL21
Area X L2ipsiSCL10L2-3
Dorsal horn L2ipsiDHL2-3
Spinal cord layer 3 L2ipsiSCL3L21
Spinal cord layer 1 L2ipsiSCL1L21
Lumbar segment 3ipsiL3-3
Intermediomedial cell column L3ipsiIMML3-3
Lateral spinal nucleus L3ipsiLSpL31
Area X L3ipsiSCL10L3-3
Dorsal horn L3ipsiDHL3-3
Spinal cord layer 5 L3ipsiSCL5L31
Spinal cord layer 3 L3ipsiSCL3L31
Spinal cord layer 4 L3ipsiSCL4L31
Spinal cord layer 1 L3ipsiSCL1L31
Lumbar segment 4ipsiL4-3
Intermediomedial cell column L4ipsiIMML4-3
Lateral spinal nucleus L4ipsiLSpL41
Area X L4ipsiSCL10L4-3
Dorsal horn L4ipsiDHL4-3
Spinal cord layer 5 L4ipsiSCL5L41
Spinal cord layer 3 L4ipsiSCL3L41
Spinal cord layer 4 L4ipsiSCL4L41
Spinal cord layer 1 L4ipsiSCL1L41
Lumbar segment 5ipsiL5-3
Intermediomedial cell column L5ipsiIMML5-3
Lateral spinal nucleus L5ipsiLSpL51
Area X L5ipsiSCL10L5-3
Dorsal horn L5ipsiDHL5-3
Spinal cord layer 5 L5ipsiSCL5L51
Spinal cord layer 3 L5ipsiSCL3L51
Spinal cord layer 4 L5ipsiSCL4L51
Spinal cord layer 1 L5ipsiSCL1L51
Lumbar segment 6ipsiL61
Intermediomedial cell column L6ipsiIMML6-3
Lateral spinal nucleus L6ipsiLSpL61
Area X L6ipsiSCL10L6-3
Dorsal horn L6ipsiDHL6-0.5
Spinal cord layer 3 L6ipsiSCL3L61
Spinal cord layer 1 L6ipsiSCL1L61
Dorsal horn S1ipsiDHS1-0.5
Spinal cord layer 5 S1ipsiSCL5S11
Spinal cord layer 4 S1ipsiSCL4S11
Spinal cord layer 1 S1ipsiSCL1S11
Sacral segment 2ipsiSa2-3
Intermediomedial cell column S2ipsiIMMS2-3
Lateral spinal nucleus S2ipsiLSpS2-3
Area X S2ipsiSCL10S2-3
Dorsal horn S2ipsiDHS2-0.5
Spinal cord layer 5 S2ipsiSCL5S21
Spinal cord layer 4 S2ipsiSCL4S21
Spinal cord layer 1 S2ipsiSCL1S21
Spinal cord layer 5 S3ipsiSCL5S31
Spinal cord layer 4 S3ipsiSCL4S31
Spinal cord layer 1 S3ipsiSCL1S31
LungipsiOrgsLung-10
Trachea sideipsiOrgsTras2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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