University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Aqueduct left


Abbreviation
Aq
Color       
Superior regionsVentricle

SynonymsAbbr.Language
Aqueduct Sylvius  
Cerebral aqueduct Eng
AqueductAqEng

SubregionsSide
Dorsal aqueductleft
Periventricular surface of the aqueductleft
Ventral surface of the aqueductleft
Ventrolateral wall of the cerebral aqueductleft
Floor of the aqueductleft
Around aqueductleft
Aqueductal wallleft
Central aqueductleft
Ependymal layer of the cerebral aqueductleft

Output to

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG-0.5
Dorsomedial periaqueductal grayipsiDMPAG-0.5
Ventromedial periaqueductal grayipsiVMPAG-0.5
Ambiguus nucleusipsiAmb1
Raphe magnus nucleusipsiRMg3
Paragigantocellular reticular nucleusipsiPGi-0.5
Paragigantocellular reticular nucleus medial partipsiPGiM1
Rostral ventral medulla oblongataipsiRVMeO-0.5
3d ventricleipsi3V-0.5

Input from

NameSideAbbr.WeightDetails
Dorsolateral periaqueductal grayipsiDLPAG3
Caudal linear nucleus of the rapheipsiCLi3
Dorsal raphe nucleus caudal partipsiDRC3
Dorsal raphe nucleus median partipsiDRM3
Dorsal raphe nucleus rostral partipsiDRr3
Dorsal raphe nucleus extreme rostral wingipsiDRrw1
Dorsal raphe nucleus dorsocaudal partipsiDRdc-0.5
Central raphe nucleusipsiCRN3
Prelimbic cortex layer 5ipsiPrLL5-2
Prelimbic cortex layer 6ipsiPrLL6-2
Infralimbic cortex layer 5ipsiILL5-2
Infralimbic cortex layer 6ipsiILL6-2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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