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Rat connectome



Infralimbic cortex layer 6 left


Abbreviation
ILL6
Color       
Superior regionsInfralimbic cortex deep layers

SynonymsAbbr.Language
Infralimbic cortex layer 6ILL6 

SubregionsSide
Infralimbic cortex layer 6aleft
Infralimbic cortex layer 6bleft

Output to

NameSideAbbr.WeightDetails
Medial longitudinal fasciculusipsimlf-2
Ventrolateral periaqueductal grayipsiVLPAG3
Lateral wing of ventrolateral periaqueductal grayipsiVLPAGLW1
Ventrolateral periaqueductal gray caudal partipsiPAGvlc1
Ventrolateral periaqueductal gray middle levelipsiVLPAGmL3
Ventrolateral periaqueductal gray rostral partipsiPAGvlr1
Laterodorsal tegmental nucleusipsiLDTg3
Dorsal motor nucleus of vagusipsi103
Dorsal raphe nucleusipsiDR3
Dorsal raphe nucleus midrostrocaudal partipsiDRmrc3
Dorsal raphe nucleus rostrocaudal partipsiDRrc3
Caudal wing of rostrocaudal dorsal raphe nucleusipsiDRrcCW1
Dorsal raphe nucleus rostrocaudal part middle levelipsiDRrcm3
Lateral wing of rostrocaudal dorsal raphe nucleusipsiDRrcLW1
Rostral wing of rostrocaudal dorsal raphe nucleusipsiDRrcRW1
Neuropil of dorsal raphe nucleusipsiDRnp3
Lateral hypothalamic area ventral partipsiLHAvp-0.5
Suprachiasmatic nucleusipsiSCh1
Anteroventral thalamic nucleusipsiAV-0.5
Centrolateral thalamic nucleus dorsal partipsiCLD3
Mediodorsal thalamic nucleusipsiMD3
Mediodorsal thalamic nucleus central partipsiMDC3
Mediodorsal thalamic nucleus lateral partipsiMDL3
Mediodorsal thalamic nucleus medial partipsiMDM3
Paraventricular thalamic nucleusipsiPV1
Reuniens thalamic nucleusipsiRe3
Ventral medial nucleus of the thalamusipsiVMT3
Lateral habenular nucleusipsiLHb2
Amygdaloid complexipsiAC3
Basomedial amygdaloid nucleusipsiBM0.5
ClaustrumipsiCl0
Accumbens nucleusipsiAc2
Accumbens nucleus coreipsiAcbC-0.5
Accumbens nucleus shellipsiAcbSh-0.5
Anterior accumbensipsiAcbA1
Retrosplenial dorsalipsiRSd0
Retrosplenial ventral partipsiRSPv0
Dorsal anterior cingulate cortex layer 5ipsiDACCL50.5
Dorsal anterior cingulate cortex layer 6ipsiDACCL60.5
Ventral anterior cingulate cortex layer 1ipsiVACCL10.5
Ventral anterior cingulate cortex layer 2ipsiVACCL20.5
Ventral anterior cingulate cortex layer 3ipsiVACCL30.5
Ventral anterior cingulate cortex layer 5ipsiVACCL50.5
Prelimbic cortexipsiPrL-0.5
Prelimbic cortex layer 1ipsiPrLL12
Prelimbic cortex layer 2ipsiPrLL20.5
Prelimbic cortex layer 3ipsiPrLL32
Prelimbic cortex layer 4ipsiPrLL41
Prelimbic cortex layer 5ipsiPrLL52
Prelimbic cortex layer 6ipsiPrLL60.5
Infralimbic cortexipsiIL3
Infralimbic cortex layer 1ipsiILL12
Infralimbic cortex layer 2ipsiILL22
Infralimbic cortex layer 5ipsiILL52
Infralimbic cortex layer 6ipsiILL62
Infralimbic cortex layer 3ipsiILL32
Infralimbic cortex layer 4ipsiILL42
Infralimbic cortex rostral partipsiILR2.5
Perirhinal cortexipsiA352
Ectorhinal cortexipsiA360.5
Postrhinal cortexipsiPOR2
Precommissural nucleusipsiPrC1
AqueductipsiAq-2
Laterodorsal tegmental nucleuscontraLDTg1.5
Dorsal motor nucleus of vaguscontra101
Dorsal raphe nucleuscontraDR3
Mediodorsal thalamic nucleus central partcontraMDC1
Mediodorsal thalamic nucleus lateral partcontraMDL2
Mediodorsal thalamic nucleus medial partcontraMDM1
ClaustrumcontraCl0
Anterior accumbenscontraAcbA0.5
Infralimbic cortexcontraIL2
Infralimbic cortex rostral partcontraILR2.5

Input from

NameSideAbbr.WeightDetails
Dorsal raphe nucleus rostrocaudal partipsiDRrc0.5
Basal forebrainipsiBAF-0.5
Lateral hypothalamic areaipsiLH-0.5
Paraventricular thalamic nucleusipsiPV1
Reuniens thalamic nucleusipsiRe2
Subfornical organipsiSFO1
Tuber cinereum areaipsiTC-0.5
Basolateral amygdaloid nucleusipsiBL2
Anterior basolateral nucleusipsiBLA-0.5
Posterior basomedial nucleusipsiBMP1
Bed nucleus of the stria terminalis anterior medial partipsiBSTAM1
Field CA1 of hippocampusipsiCA13
Mid-rostral level of dorsolateral entorhinal cortex layer 4ipsiDLEntMrL42
Mid-rostral level of dorsolateral entorhinal cortex layer 5ipsiDLEntMrL52
Mid-rostral level of dorsolateral entorhinal cortex layer 6ipsiDLEntMrL62
Ventral anterior cingulate cortex layer 5ipsiVACCL50.5
Ventral anterior cingulate cortex layer 6ipsiVACCL60.5
Prelimbic cortex layer 2ipsiPrLL22
Prelimbic cortex layer 3ipsiPrLL32
Prelimbic cortex layer 5ipsiPrLL52
Prelimbic cortex layer 6ipsiPrLL62
Infralimbic cortexipsiIL3
Infralimbic cortex layer 1ipsiILL12
Infralimbic cortex layer 2ipsiILL22
Infralimbic cortex layer 5ipsiILL52
Infralimbic cortex layer 5bipsiILL5b-2
Infralimbic cortex layer 6ipsiILL62
Infralimbic cortex layer 3ipsiILL32
Infralimbic cortex layer 4ipsiILL42
Agranular insular cortex dorsal partipsiAID2
Superficial layers of the posterior part of the agranular insular cortexipsiAIPsL0.5
Agranular insular cortex posterior part layer 5ipsiAIPL51
Agranular insular cortex posterior part layer 6ipsiAIPL60.5
Perirhinal cortexipsiA352
Perirhinal cortex midportion layer 4ipsiPRhMiL42
Perirhinal cortex midportion layer 5ipsiPRhMiL52
Perirhinal cortex midportion layer 6ipsiPRhMiL62
Perirhinal cortex rostral part layer 4ipsiPRroL42
Perirhinal cortex rostral part layer 5ipsiPRroL52
Perirhinal cortex rostral part layer 6ipsiPRroL62
Ectorhinal cortexipsiA364
Postrhinal cortexipsiPOR0
Infralimbic cortexcontraIL1.5
Superficial layers of the posterior part of the agranular insular cortexcontraAIPsL0.5
Agranular insular cortex posterior part layer 5contraAIPL50.5
Agranular insular cortex posterior part layer 6contraAIPL60.5
Perirhinal cortexcontraA350.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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