University of Rostock

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Rat connectome



Lateral cervical nucleus left


Abbreviation
LatC
Color       
Superior regionsSpinal cord

SynonymsAbbr.Language
 LCN 
Lateral cervical nucleusLatCEng

Output to

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG2
Lateral periaqueductal grayipsiLPAG0.5
External cortex of the inferior colliculusipsiECIC-0.5
Intercollicular nucleusipsiInCo0.5
Deep mesencephalic nucleusipsiDpMe2
Pontine reticular nucleus caudal partipsiPNC2
Cuneiforme nucleusipsiCnF2
Lateral parabrachial nucleusipsiLPB3
Parabrachial nucleus medialipsiPBnMe1
Medullary reticular nucleusipsiMdD0.5
Subcoeruleus nucleusipsiSubC1
Parafascicular thalamic nucleusipsiPF1
Posterior thalamic nuclear group caudal partipsiPoca0
Mediodorsal thalamic nucleusipsiMD1
Ventrobasal complexipsiVB1
Ventral posterolateral thalamic nucleusipsiVPL-0.5
Ventral posterolateral thalamic nucleus caudal partipsiVPLca0
Central amygdaloid nucleusipsiCe1
Lumbar segmentsipsiLSeg0.5
Periaqueductal graycontraPAG3
Lateral periaqueductal graycontraLPAG0.5
Central nucleus of the inferior colliculuscontraCIC3
External cortex of the inferior colliculuscontraECIC2
Intercollicular area of the external cortex of the inferior colliculuscontraicECIC-0.5
Intercollicular nucleuscontraInCo0.5
Intermediate gray layer of the superior colliculuscontraInG3
Deep gray layer of the superior colliculuscontraDpG1
Lateral tegmental areacontraLTGA0
Deep mesencephalic nucleuscontraDpMe2
Pontine reticular nucleus caudal partcontraPNC1
Cuneiforme nucleuscontraCnF2
Lateral parabrachial nucleuscontraLPB3
Parabrachial nucleus medialcontraPBnMe2
Medullary reticular nucleuscontraMdD0.5
Subcoeruleus nucleuscontraSubC1
ThalamuscontraT-0.5
Parafascicular thalamic nucleuscontraPF2
Posterior thalamic nuclear groupcontraPo3
Posterior thalamic nuclear group triangular partcontraPoT2
Suprageniculate thalamic nucleuscontraSG2
Mediodorsal thalamic nucleuscontraMD1
Ventral posterolateral thalamic nucleuscontraVPL3
Ventral posteromedial thalamic nucleuscontraVPM3
Posterior intralaminar thalamic nucleuscontraPIL2
Anterior pretectal nucleuscontraAPT2
Central amygdaloid nucleuscontraCe2

Input from

NameSideAbbr.WeightDetails
Caudal part of the lateral reticular nucleusipsiCaLRt-0.5
Lateral reticular nucleus rostral partipsiLRtr-0.5
Nucleus proprius C1ipsiPDHC13
Nucleus proprius C2ipsiPDHC23
Nucleus proprius C3ipsiPDHC33
Nucleus proprius C4ipsiPDHC43
Nucleus proprius C5ipsiPDHC53
Nucleus proprius C6ipsiPDHC63
Nucleus proprius T1ipsiPDHT11
Nucleus proprius T2ipsiPDHT21
Nucleus proprius T3ipsiPDHT31
Nucleus proprius T4ipsiPDHT41
Nucleus proprius T5ipsiPDHT51
Nucleus proprius T6ipsiPDHT61
Nucleus proprius T7ipsiPDHT71
Nucleus proprius T8ipsiPDHT81
Nucleus proprius T9ipsiPDHT91
Nucleus proprius T10ipsiPDHT101
Nucleus proprius T11ipsiPDHT111
Nucleus proprius T12ipsiPDHT121
Nucleus proprius T13ipsiPDHT131
Nucleus proprius L1ipsiPDHL11
Nucleus proprius L2ipsiPDHL21
Nucleus proprius L3ipsiPDHL31
Nucleus proprius L4ipsiPDHL41
Nucleus proprius L5ipsiPDHL51
Nucleus proprius L6ipsiPDHL61
Nucleus proprius S1ipsiPDHS10.5
Nucleus proprius S2ipsiPDHS20.5
Nucleus proprius S3ipsiPDHS30.5
Nucleus proprius S4ipsiPDHS40.5
Caudal part of the lateral reticular nucleuscontraCaLRt-0.5
Lateral reticular nucleus rostral partcontraLRtr-0.5
Cervical segment 6contraCS6-0.5
Cervical segment 7contraCS7-0.5
Cervical segment 8contraCS8-0.5
Thoracal segment 1contraT1-0.5
Thoracal segment 8contraT8-0.5
Thoracal segment 9contraT9-0.5
Thoracal segment 10contraT10-0.5
Lumbar segment 3contraL3-0.5
Lumbar segment 4contraL4-0.5
Lumbar segment 5contraL5-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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