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Rat connectome



Mediodorsal thalamic nucleus right


Abbreviation
MD
Color       
Superior regionsMedial group of the dorsal thalamus

SynonymsAbbr.Language
 MED 
Mediodorsal thalamic nucleus of the thalamus  
Mediodorsal nucleus of the thalamus  
Dorsomedial thalamic nucleus Eng
Dorsomedial nucleus of thalamus  
Medial dorsal thalamic nucleus  
Dorsomedial thalamus  
Medial dorsal nucleus Eng
Mediodorsal thalamic nucleusMDEng
Dorsomedial nucleus of the thalamus Eng
Mediodorsal nucleus  
Mediodorsal nuclear area of the thalamus Eng
Mediodorsal thalamic nucleusMDThEng

SubregionsSide
Intermediodorsal thalamic nucleusright
Mediodorsal thalamic nucleus anterior partright
Mediodorsal thalamic nucleus caudal partright
Mediodorsal thalamic nucleus caudomedial partright
Mediodorsal thalamic nucleus central partright
Mediodorsal thalamic nucleus dorsal partright
Mediodorsal thalamic nucleus dorsocentral partright
Mediodorsal thalamic nucleus dorsomedial partright
Mediodorsal thalamic nucleus lateral partright
Mediodorsal thalamic nucleus laterodorsal partright
Mediodorsal thalamic nucleus medial partright
Mediodorsal thalamic nucleus paralaminar partright
Mediodorsal thalamic nucleus posterior partright
Mediodorsal thalamic nucleus posterodorsal partright
Mediodorsal thalamic nucleus rostral partright
Mediodorsal thalamic nucleus rostrocaudal partright
Mediodorsal thalamic nucleus rostromedial partright
Mediodorsal thalamic nucleus ventral partright
Mediodorsal thalamic nucleus ventrolateral partright
Mediodorsal thalamic nucleus ventromedial partright
Mediodorsal thalamic nucleus centromedial portionright
Mediodorsal thalamic nucleus intermediate partright
Mediodorsal thalamic nucleus middle partright
Dorsolateral part of the mediodorsal thalamic nucleusright
Mediodorsal thalamic nucleus basal partright
Mediodorsal thalamic nucleus paralemellar divisionright
Mediodorsal thalamic nucleus intermediate level of the rostrocaudal axisright
Mediodorsal thalamic nucleus dorsoventral partright
Mediodorsal thalamic nucleus marginal zoneright

Output to

NameSideAbbr.WeightDetails
Central graycontraCG1
Substantia nigra A9contraSN0
Dorsal raphe nucleuscontraDR1.5
Linear nucleus of the raphecontraLIR0
Median raphe nucleuscontraMnR0
Rostral ventral respiratory groupcontraRVRG0.5
Islands of CallejacontraICj1
Diagonal band of BrocacontraDBB0
Lateral preoptic areacontraLPO1.5
Medial preoptic nucleuscontraMPO1.5
Lateral hypothalamic areacontraLH3
Dorsal hypothalamic areacontraDA0
Dorsomedial hypothalamic nucleus [Medial zone]contraDM1
Posterior hypothalamic nucleuscontraPH2
Ventromedial hypothalamic nucleuscontraVMH1
Arcuate nucleuscontraArc1
Posterior mammillay nucleuscontraPMAM1
Submammillothalamic nucleuscontraSMT1
Supramammillar nucleuscontraSuM1
Dorsal thalamuscontraDOR0
Posterior thalamic nuclear groupcontraPo2
Mediodorsal thalamic nucleuscontraMD3
Reuniens thalamic nucleuscontraRe1
Lateral thalamic nuclear groupcontraLTNG2
Reticular thalamic nucleuscontraRt2
Reticular thalamic nucleus rostral partcontraRtr-0.5
Reticular thalamic nucleus ventral partcontraRtV2
Zona incertacontraZI2
Zona incerta dorsal partcontraZID2
Tuber cinereum areacontraTC0
Medial forebrain bundlecontramfb3
Anterior amygdaloid areacontraAA1.5
Lateral globus palliduscontraLGP0
Accumbens nucleus shellcontraAcbSh-0.5
Dorsomedial shellcontraAcbShdm-0.5
Caudate putamencontraCPu0
SubiculumcontraS-3
Subiculum dorsal partcontraSd0
Subiculum ventral partcontraSv0
Piriform cortexcontraPir2
Cingulate cortexcontraCg0
Anterior cingulate cortexcontraACC2
Cingulate cortex area 1contraCg1-0.5
Cingulate cortex area 2contraCg22
Prelimbic cortexcontraPrL2
Infralimbic cortexcontraIL2
Parietal association cortexcontraPtA2
Infragranular layers of the auditory cortexcontraAULi-0.5
Insular cortexcontraICX1
Agranular insular cortex dorsal partcontraAID3
Agranular insular cortex ventral partcontraAIV-0.5
Dysgranular insular cortexcontraDI-0.5
Whiskers motor cortexcontraWMCx-0.5
Medial agranular prefrontal cortexcontraAGm2
Anterior medial frontal cortexcontraAMFC0
Orbital cortexcontraOrC2
Lateral orbital cortexcontraLO0.5
Ventrolateral orbital area posterior partcontraVLOp0
Ventral lateral geniculate nucleuscontraVLG-0.5
Lateral septal nucleus intermediate partcontraLSI0.5
Septofimbrial nucleuscontraSFi1.5
Triangular septal nucleuscontraTS0.5
VeinipsiV-0.5
Central grayipsiCG2
Paralemniscal nucleusipsiPL2
Superior colliculusipsiSC-0.5
Rostromedial tegmental nucleusipsiRMTg3
Substantia nigra A9ipsiSN1
Ventral tegmental area A10ipsiVTA3
Reticular systemipsiRF3
Pontine reticular nucleus oral partipsiPnO-0.5
Dorsal raphe nucleusipsiDR2
Linear nucleus of the rapheipsiLIR1
Median raphe nucleusipsiMnR1
Rostral ventral respiratory groupipsiRVRG0.5
ProsencephalonipsiPRC-0.5
Endopiriform systemipsiEnN-0.5
Ventral endopiriform nucleusipsiVEn1
Islands of CallejaipsiICj2
Diagonal band of BrocaipsiDBB2
Basal nucleus Meynert medial partipsiBmp2
Substantia innominataipsiSI-0.5
Lateral preoptic areaipsiLPO2.5
Medial preoptic areaipsiMPA0
Medial preoptic nucleusipsiMPO2.5
Lateral hypothalamic areaipsiLH3
Dorsal hypothalamic areaipsiDA2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Posterior hypothalamic nucleusipsiPH3
Ventromedial hypothalamic nucleusipsiVMH1.5
Periventricular zoneipsiPVZ0
Arcuate nucleusipsiArc2
Paraventricular hypothalamic nucleusipsiPa0
Suprachiasmatic nucleusipsiSCh2
Posterior mammillay nucleusipsiPMAM3
Submammillothalamic nucleusipsiSMT2.5
Supramammillar nucleusipsiSuM1
Central medial thalamic nucleusipsiCM2
Midline in the central medial thalamic nucleusipsiCMmi0
Centrolateral thalamic nucleusipsiCL-0.5
Gelatinosus thalamic nucleusipsiG2
Parafascicular thalamic nucleusipsiPF-2
Rhomboid thalamic nucleusipsiRh2
Mediodorsal thalamic nucleusipsiMD0
Intermediodorsal thalamic nucleusipsiIMD0
Paratenial thalamic nucleusipsiPT-0.5
Paraventricular thalamic nucleusipsiPV-0.5
Reuniens thalamic nucleusipsiRe2
Ventromedial thalamic nucleusipsiVM2
Ventral thalamusipsiVNT1.5
Reticular thalamic nucleusipsiRt1
Reticular thalamic nucleus caudal partipsiRtc1
Reticular thalamic nucleus external partipsiRtex2
Reticular thalamic nucleus ventral partipsiRtV2
Zona incertaipsiZI3
Tuber cinereum areaipsiTC1.5
Lateral habenular nucleusipsiLHb-2
Lateral habenular nucleus lateral partipsiLHbL-0.5
Internal capsuleipsiic-2
Medial forebrain bundleipsimfb3
Dorsal bank of the anterior portion of the rhinal fissureipsidarf3
Amygdaloid complexipsiAC1
Basal nucleusipsiBnc2
Basal dorsal nucleus anterior poleipsiBnDa-0.5
Basal nucleus anterior subdivisionipsiBncA3
Basal nucleus ventral divisonipsiBncV2
Basolateral amygdaloid nucleusipsiBL1
Anterior basolateral nucleusipsiBLA-0.5
Basolateral amygdaloid nucleus ventral partipsiBLve-0.5
Basolateral nucleus medial portionipsiBLmp-0.5
Posterior basolateral nucleusipsiBLP-0.5
Ventral basolateral nucleusipsiBLV1.5
Posterior basomedial nucleusipsiBMP1.5
Caudal basal amygdaloid nucleusipsiBncc-0.5
Lateral amygdaloid nucleusipsiLA-0.5
Dorsolateral part of the lateral nucleusipsiLaDL2
Posterior part of the lateral nucleusipsiLAP-0.5
Ventromedial part of the lateral nucleusipsiLaVM2
Bed nucleus of the stria terminalis intraamygdaloid divisionipsiBSTIA2
Central amygdaloid nucleusipsiCe3
Capsule like area surrounding central amygdaloid nucleusipsiCec2
Central partipsiCeLc-0.5
Anterior amygdaloid areaipsiAA2.5
Anterior cortical amygdaloid nucleusipsiACo2
Posterolateral cortical nucleusipsiPLCo2
Periamygdaloid complexipsiPAC1
Medial amygdaloid nucleusipsiMe-0.5
Medial amygdaloid nucleus anterior partipsiMeAn0.5
Amygdalohippocampal areaipsiAHi2
Basal gangliaipsiBG-0.5
ClaustrumipsiCl-0.5
Globus pallidusipsiGP1
Lateral globus pallidusipsiLGP3
Medial globus pallidusipsiMGP2
Ventral pallidumipsiVP2
Accumbens nucleusipsiAc-0.5
Accumbens nucleus anteromedial partipsiAcAM3
Lateral coreipsiAcbCl-0.5
Accumbens nucleus shellipsiAcbSh-0.5
Dorsomedial shellipsiAcbShdm-0.5
Lateral accumbens shellipsiAcbShl2
Medial accumbens shellipsiAcbShm2
Lateral nucleus accumbensipsiAcl0.5
Medial accumbensipsiAcbM0.5
Caudate putamenipsiCPu3
Medial striatumipsiCPum0
Caudalmost striatumipsiCPucmo0
Dorsal striatumipsiCPud2
Mediodorsal striatumipsiCPuMD-0.5
Rostral striatumipsiCPur2
Rostral most region of the striatumipsiCPurmo1
Ventromedial striatumipsiCPuvm2
Subthalamic nucleusipsiSTh2
Cerebral cortexipsiCEC-0.5
Dorsal hippocampusipsiHIPPd-0.5
SubiculumipsiS0
Subiculum dorsal partipsiSd1
Subiculum ventral partipsiSv3
Entorhinal cortexipsiEnt3
Lateral entorhinal cortexipsiLEnt3
Piriform cortexipsiPir3
Prepiriform cortexipsiPRPIR1
Retrosplenial regionsipsiRS1
Retrosplenial dorsalipsiRSd0
Retrosplenial cortexipsiRSCx-0.5
Cingulate cortexipsiCg3
Anterior cingulate cortexipsiACC3
Anterior cingulate cortex anterior part layer 1bipsiACCaL1b-0.5
Anterior cingulate cortex anterior part layer 2ipsiACCaL2-0.5
Anterior cingulate cortex anterior part layer 3ipsiACCaL3-0.5
Cingulate cortex area 1ipsiCg13
Cingulate cortex area 2ipsiCg22
Cingulate cortex area 3ipsiCg33
Dorsal anterior cingulate cortexipsiDACC-0.5
Dorsal anterior cingulate cortex layer 3ipsiDACCL3-0.5
Cingulate cortex layer 1ipsiCgL11.5
Middle cingulate cortexipsiMCC-0.5
Posterior cingulate cortexipsiPCC-0.5
Prelimbic cortexipsiPrL3
Prelimbic cortex layer 3ipsiPrLL32
Prelimbic cortex layer 4ipsiPrLL4-0.5
Infralimbic areaipsiiLA3
Infralimbic cortexipsiIL3
NeocortexipsiNEOCX-0.5
Frontal association cortexipsiFrA3
Frontal association cortex lateroventral partipsiFrALV0
Frontal cortex area 1ipsiFr12
Frontal cortex area 2ipsiFr23
Frontal cortex area 2 anterior partipsiFr2a2
Frontal cortex area 2 caudal partipsiFr2C3
Frontal cortex area 2 rostral partipsiFr2R3
Frontal cortex area 2 layer 3ipsiFr2L3-0.5
Frontal cortex area 2 layer 1bipsiFr2L1b-0.5
Frontal cortex area 2 layer 2ipsiFr2L2-0.5
Most ventral part of the pregenual part of the anteromedial cortexipsiFr2mvpg3
Parietal association cortexipsiPtA2
Lateral parietal association cortexipsiLPtA1
Medial parietal association cortexipsiMPtA1
Parietal cortex posterior area caudal part of the lateral portionipsiParPcL-0.5
Parietal cortex posterior area medial portionipsimPPC1
Parietal cortex posterior area rostrocaudal extent of the medial portionipsimrcPPC1
Infragranular layers of the auditory cortexipsiAULi-0.5
Frontal polar cortexipsiFP1
Frontal polar cortex dorsal partipsiFPd-0.5
Insular cortexipsiICX3
Agranular insular cortexipsiAI2
Agranular insular cortex anterior partipsiAIA-0.5
Agranular insular cortex dorsal partipsiAID3
Agranular insular cortex dorsal part layer 3ipsiAIDL3-0.5
Agranular insular cortex dorsal part superficial layersipsiAIDsL3
Agranular insular cortex dorsal part rostral subdivision layer 1ipsiAIDrL12
Agranular insular cortex dorsal part rostral subdivision layer 3ipsiAIDrL32
Agranular insular cortex dorsal part rostral subdivision layer 5ipsiAIDrL52
Agranular insular cortex intermediate partipsiAIim2
Agranular insular cortex layer 5ipsiAIL51
Agranular insular cortex layer 6ipsiAIL61
Agranular insular cortex layer 1ipsiAIL12
Agranular insular cortex layer 3ipsiAIL32
Agranular insular cortex layer 4ipsiAIL42
Agranular insular cortex posterior partipsiAIP2
Agranular insular cortex rostral partipsiRAIC3
Agranular insular cortex rostral caudal partipsiRCAIC2
Agranular insular cortex ventral partipsiAIV-0.5
Agranular insular cortex ventral part layer 3ipsiAIVL3-0.5
Agranular insular cortex ventral part jaw movement areaipsiAIVjm-0.5
Dysgranular insular cortexipsiDI3
Granular insular cortexipsiGI0.5
Border region of the agranular and granular insular cortex ventral partipsiAGbGICXv3
Perirhinal cortexipsiA352
Ectorhinal cortexipsiA360
Prefrontal cortexipsiPFC3
Prefrontal cortex layer 1ipsiPFCL11
Prefrontal cortex layer 2ipsiPFCL21
Prefrontal cortex layer 3ipsiPFCL32
Prefrontal cortex layer 4ipsiPFCL41
Prefrontal cortex layer 5ipsiPFCL51
Prefrontal cortex layer 6ipsiPFCL61
Prefrontal cortex supragenual partipsisgPFC3
Pregenual sector of the prefrontal cortexipsipgPFC-0.5
Ventral part of the pregenual sector of the prefrontal cortexipsivpgPFC4
Dorsal part of the pregenual sector of the prefrontal cortexipsidpgPFC3
Lateral prefrontal cortexipsilPFC-0.5
Lateral agranular prefrontal cortexipsiAGl1
Caudal forelimb motor areaipsiCFMA1.5
Rostral forelimb motor areaipsiRFMA3
Rostral part of lateral agranular prefrontal cortexipsiAGlr1
Whiskers motor cortexipsiWMCx2
Rostral motor areaipsiRMA2
Medial prefrontal cortexipsimPFC3
Medial prefrontal cortex dorsal partipsimPFCd0.5
Medial prefrontal cortex layer 5ipsimPFCL5-0.5
Medial prefrontal cortex layer 6ipsimPFCL6-0.5
Medial prefrontal cortex layer 3ipsimPFCL32
Medial prefrontal cortex layer 4ipsimPFCL42
Medial prefrontal cortex layer 1ipsimPFCL12
Medial prefrontal cortex layer 2ipsimPFCL2-0.5
Medial prefrontal cortex ventral partipsimPFCV0.5
Medial prefrontal cortex posterior partipsimPFCp0
Medial agranular prefrontal cortexipsiAGm1
Medial agranular prefrontal cortex rostral partipsirAGm2
Medial agranular prefrontal cortex rostral part layer 1ipsirAGmL1-1
Posterior part of the medial agranular prefrontal cortexipsiPoAGm-0.5
Primary somatosensory cortexipsiS11
Caudal whisker areaipsiCS1BF1
Rostral whisker areaipsiRS1BF2
Primary somatosensory cortex layer 4ipsiS1L4-0.5
Primary somatosensory cortex forelimb region rostral partipsiS1FLR3
Primary somatosensory cortex rostral partipsiS1r0
Primary visual cortexipsiV11
Secondary visual cortexipsiV2-0.5
Lateral extrastriate cortexipsiVISxL1
Medial extrastriate cortexipsiVISM1
Orbitofrontal cortexipsiOrFCx-0.5
Anterior medial frontal cortexipsiAMFC1
Orbital cortexipsiOrC2
Lateral orbital cortexipsiLO3
Lateral orbital cortex layer 1bipsiLOLaL1b-0.5
Lateral orbital cortex layer 2ipsiLOLaL2-0.5
Lateral orbital cortex layer 3ipsiLOLaL32
Medial orbital cortexipsiMO3
Ventral orbital cortexipsiVO2
Rostral ventral orbital cortexipsiRVO-0.5
Ventral orbital cortex layer 1bipsiVOL1b-0.5
Ventral orbital cortex layer 2ipsiVOL2-0.5
Ventral orbital cortex layer 3ipsiVOL3-0.5
Ventrolateral orbital areaipsiVLO2
Ventrolateral orbital area posterior partipsiVLOp1
Orbital prefrontal cortexipsioPFC-0.5
Ventral lateral geniculate nucleusipsiVLG-0.5
Ventral lateral geniculate nucleus magnocellular partipsiVLGMC1
Ventral lateral geniculate nucleus parvicellular partipsiVLGPC4
Interpeduncular nucleusipsiIP3
Olfactory bulb A16ipsiMOB-1
Olfactory tubercle lateral partipsiTuOL0.5
Lateral septal nucleusipsiLS-0.5
Lateral septal nucleus intermediate partipsiLSI2.5
Septofimbrial nucleusipsiSFi2
Triangular septal nucleusipsiTS2
Intermediolateral cell columnipsiIML-0.5
Vagus nerveipsiAutoV1

Input from

NameSideAbbr.WeightDetails
Central graycontraCG0.5
Central gray pons partcontraCGP3
Tegmental areacontraTGA-0.5
Mesopontine tegmental areacontraTGAm1
Substantia nigra reticular partcontraSNR-0.5
Laterodorsal tegmental nucleuscontraLDTg3
Dorsal tegmental nucleuscontraDTg3
Dorsal tegmental nucleus lateral partcontraDLTN1
Pedunculopontine tegmental nucleus pars compactacontraPPNC0.5
Pedunculopontine tegmental nucleus pars dissipatacontraPPNd-0.5
Dorsolateral humpcontraCERcndl2
Dorsomedial crestcontraCERcndm1
Interposed cerebellar nucleicontraICN2
Lateral cerebellar nucleuscontraCERL3
Lateral cerebellar nucleus parvicellular partcontraLatPC1
Lateral cerebellar nucleus rostral partcontraCERLr2
Medial cerebellar nucleuscontraMed-0.5
Medial cerebellar nucleus centromedial partcontraCMMed1
Medial cerebellar nucleus middle subdivisioncontraMMCM1
Dorsolateral protuberancecontraDLPr1
Caudal pons dorsal groupcontraPcaD-0.5
Central part of the pontis caudaliscontraPcaCe-0.5
Medioventral part of the nucleus pontis oraliscontraPorMV-0.5
Prepositus nucleuscontraPr3
Deep mesencephalic nucleuscontraDpMe1
Dorsomedial cuneiforme nucleuscontraCnFdm1
Lateral reticular nucleuscontraLRt-0.5
Parvicellular reticular nucleuscontraPCRt-0.5
Principal sensory trigeminal nucleuscontraPr54
Principal sensory trigeminal nucleus dorsal boundarycontraPr5Db1
Spinal trigeminal nucleus caudal partcontraSp5C0.5
Spinal trigeminal nucleus interpolar partcontraSp5I3
Spinal trigeminal nucleus oral partcontraSp5O1
Medial vestibular nucleus caudal partcontraMVeP3
Dorsal raphe nucleuscontraDR1
Median raphe nucleuscontraMnR1
Cuneate nucleuscontraCu3
GracilecontraGra3
Nucleus of BischoffcontraNBi0.5
Basal forebraincontraBAF0
Basal nucleus MeynertcontraB2.5
Basal nucleus Meynert caudal partcontraBca2.5
Intermediate hypothalamic cell groupscontraIHCG-0.5
Dorsomedial hypothalamic nucleuscontraDMHy-0.5
Lateral zonecontraLHA-0.5
Lateral hypothalamic areacontraLH-0.5
Anterior hypothalamic areacontraAHA-0.5
Dorsal hypothalamic areacontraDA-0.5
Ventromedial hypothalamic nucleuscontraVMH-0.5
Ventromedial hypothalamic nucleus ventrolateral partcontraVMHVL-0.5
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contraPaAP-0.5
Ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contravPaAP-0.5
Adjacent to the ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contraPaAPav-0.5
Paraventricular hypothalamic nucleuscontraPa-0.5
Anterior part of periventricular parvocellular subdivision of paraventricular hypothalamic nucleuscontraPVPapvA-0.5
Perifornical nucleuscontraPeF-0.5
Centrolateral thalamic nucleuscontraCL1
Mediodorsal thalamic nucleuscontraMD3
Reticular thalamic nucleuscontraRt2
Zona incertacontraZI1
Lateral habenular nucleus lateral partcontraLHbL1
Anterior basolateral nucleus medial partcontraBLAM3
Bed nucleus of the stria terminalis fusiform partcontraFu3
Central amygdaloid nucleuscontraCe-1
Nucleus of the lateral olfactory tractcontraLOT3
Lateral globus palliduscontraLGP1
Parasubthalamic nucleuscontraPSTh3
Anterior cingulate cortex layer 5contraACCL5-0.5
Anterior cingulate cortex layer 6contraACCL6-0.5
Anterior cingulate cortex rostral partcontraACCr3
Cingulate cortex area 3contraCg32
Cingulate cortex area 3 layer 6contraCg3L6-0.5
Dorsal anterior cingulate cortexcontraDACC2.5
Prelimbic cortexcontraPrL2.5
Prelimbic cortex layer 5contraPrLL52
Prelimbic cortex layer 6contraPrLL62
Infralimbic cortexcontraIL2.5
Infralimbic cortex layer 5contraILL5-0.5
Frontal association cortexcontraFrA2
Frontal cortex area 2contraFr2-0.5
Parietal cortex ventral area caudal partcontraParVC2
Agranular insular cortexcontraAI2
Agranular insular cortex dorsal partcontraAID2.5
Agranular insular cortex rostral partcontraRAIC1
Agranular insular cortex ventral partcontraAIV2.5
Dysgranular insular cortex layer 5contraDIL5-0.5
Dorsal part of the granular insular cortex rostroventrally adjacent to the rostralmost part of S2contradGlrvs20
Dorsal peduncular cortexcontraDP2.5
Prefrontal cortexcontraPFC1
Lateral agranular prefrontal cortexcontraAGl-0.5
Medial agranular prefrontal cortexcontraAGm3
Sensory regionscontraSR2
Anterior medial frontal cortexcontraAMFC2
Orbital cortexcontraOrC2
Lateral orbital cortexcontraLO2.5
Medial orbital cortexcontraMO2.5
Posterior orbital cortexcontraOrCP2
Ventrolateral orbital areacontraVLO2.5
Interpeduncular nucleuscontraIP1
Interpeduncular nucleus dorsolateral subnucleuscontraIPDL2
Lateral cervical nucleuscontraLatC1
Lateral spinal nucleuscontraMESLn1
Cervical segment 1contraCS14
Internal basilar nucleus C1contraIBC1-0.5
Spinal cord layer 5 C1contraSCL5C12
Spinal cord layer 6 C1contraSCL6C12
Spinal cord layer 3 C1contraSCL3C12
Spinal cord layer 4 C1contraSCL4C12
Spinal cord layer 1 C1contraSCL1C1-0.5
Intermediate zone C1contraizVHC1-0.5
Cervical segment 2contraCS24
Internal basilar nucleus C2contraIBC2-0.5
Spinal cord layer 5 C2contraSCL5C22
Spinal cord layer 6 C2contraSCL6C22
Spinal cord layer 3 C2contraSCL3C22
Spinal cord layer 4 C2contraSCL4C22
Spinal cord layer 1 C2contraSCL1C2-0.5
Intermediate zone C2contraizVHC2-0.5
Cervical segment 3contraCS33
Spinal cord layer 5 C3contraSCL5C32
Spinal cord layer 6 C3contraSCL6C32
Spinal cord layer 3 C3contraSCL3C32
Spinal cord layer 4 C3contraSCL4C32
Intermediate zone C3contraizVHC3-0.5
Cervical segment 4contraCS42
Spinal cord layer 5 C4contraSCL5C42
Spinal cord layer 6 C4contraSCL6C42
Spinal cord layer 3 C4contraSCL3C42
Spinal cord layer 4 C4contraSCL4C42
Intermediate zone C4contraizVHC4-0.5
Cervical segment 5contraCS52
Spinal cord layer 5 C5contraSCL5C52
Spinal cord layer 6 C5contraSCL6C52
Spinal cord layer 3 C5contraSCL3C52
Spinal cord layer 4 C5contraSCL4C52
Intermediate zone C5contraizVHC5-0.5
Cervical segment 6contraCS61
Spinal cord layer 5 C6contraSCL5C62
Spinal cord layer 6 C6contraSCL6C62
Spinal cord layer 3 C6contraSCL3C62
Spinal cord layer 4 C6contraSCL4C62
Intermediate zone C6contraizVHC6-0.5
Cervical segment 7contraCS72
Lateral spinal nucleus C7contraLSpC71.5
Spinal cord layer 5 C7contraSCL5C72
Spinal cord layer 6 C7contraSCL6C72
Spinal cord layer 3 C7contraSCL3C72
Spinal cord layer 4 C7contraSCL4C72
Spinal cord layer 1 C7contraSCL1C70.5
Spinal cord layer 2 C7contraSCL2C70.5
Intermediate zone C7contraizVHC7-0.5
Spinal cord layer 7 C7contraSCL7C70.5
Cervical segment 8contraCS82
Spinal cord layer 5 C8contraSCL5C82
Spinal cord layer 6 C8contraSCL6C82
Spinal cord layer 3 C8contraSCL3C82
Spinal cord layer 4 C8contraSCL4C82
Intermediate zone C8contraizVHC8-0.5
Thoracal segment 1contraT11
Spinal cord layer 5 T1contraSCL5T12
Spinal cord layer 6 T1contraSCL6T12
Spinal cord layer 3 T1contraSCL3T12
Spinal cord layer 4 T1contraSCL4T12
Intermediate zone T1contraizVHT1-0.5
Thoracal segment 2contraT21
Spinal cord layer 5 T2contraSCL5T22
Spinal cord layer 6 T2contraSCL6T22
Spinal cord layer 3 T2contraSCL3T22
Spinal cord layer 4 T2contraSCL4T22
Intermediate zone T2contraizVHT2-0.5
Thoracal segment 3contraT31
Spinal cord layer 5 T3contraSCL5T32
Spinal cord layer 6 T3contraSCL6T32
Spinal cord layer 3 T3contraSCL3T32
Spinal cord layer 4 T3contraSCL4T32
Intermediate zone T3contraizVHT3-0.5
Thoracal segment 4contraT40.5
Spinal cord layer 5 T4contraSCL5T42
Spinal cord layer 6 T4contraSCL6T42
Spinal cord layer 3 T4contraSCL3T42
Spinal cord layer 4 T4contraSCL4T42
Intermediate zone T4contraizVHT4-0.5
Thoracal segment 5contraT50.5
Spinal cord layer 5 T5contraSCL5T52
Spinal cord layer 6 T5contraSCL6T52
Spinal cord layer 3 T5contraSCL3T52
Spinal cord layer 4 T5contraSCL4T52
Intermediate zone T5contraizVHT5-0.5
Thoracal segment 6contraT60.5
Spinal cord layer 5 T6contraSCL5T62
Spinal cord layer 6 T6contraSCL6T62
Spinal cord layer 3 T6contraSCL3T62
Spinal cord layer 4 T6contraSCL4T62
Intermediate zone T6contraizVHT6-0.5
Thoracal segment 7contraT71
Spinal cord layer 5 T7contraSCL5T72
Spinal cord layer 6 T7contraSCL6T72
Spinal cord layer 3 T7contraSCL3T72
Spinal cord layer 4 T7contraSCL4T72
Intermediate zone T7contraizVHT7-0.5
Thoracal segment 8contraT80.5
Spinal cord layer 5 T8contraSCL5T82
Spinal cord layer 6 T8contraSCL6T82
Spinal cord layer 3 T8contraSCL3T82
Spinal cord layer 4 T8contraSCL4T82
Intermediate zone T8contraizVHT8-0.5
Thoracal segment 9contraT92
Spinal cord layer 5 T9contraSCL5T92
Spinal cord layer 6 T9contraSCL6T92
Spinal cord layer 3 T9contraSCL3T92
Spinal cord layer 4 T9contraSCL4T92
Intermediate zone T9contraizVHT9-0.5
Thoracal segment 10contraT102
Spinal cord layer 5 T10contraSCL5T102
Spinal cord layer 6 T10contraSCL6T102
Spinal cord layer 3 T10contraSCL3T102
Spinal cord layer 4 T10contraSCL4T102
Intermediate zone T10contraizVHT10-0.5
Thoracal segment 11contraT112
Spinal cord layer 5 T11contraSCL5T112
Spinal cord layer 6 T11contraSCL6T112
Spinal cord layer 3 T11contraSCL3T112
Spinal cord layer 4 T11contraSCL4T112
Intermediate zone T11contraizVHT11-0.5
Thoracal segment 12contraT121
Spinal cord layer 5 T12contraSCL5T122
Spinal cord layer 6 T12contraSCL6T122
Spinal cord layer 3 T12contraSCL3T122
Spinal cord layer 4 T12contraSCL4T122
Intermediate zone T12contraizVHT12-0.5
Thoracal segment 13contraT131
Spinal cord layer 5 T13contraSCL5T132
Spinal cord layer 6 T13contraSCL6T132
Spinal cord layer 3 T13contraSCL3T132
Spinal cord layer 4 T13contraSCL4T132
Intermediate zone T13contraizVHT13-0.5
Lumbar segment 1contraL13
Spinal cord layer 5 L1contraSCL5L12
Spinal cord layer 6 L1contraSCL6L12
Spinal cord layer 3 L1contraSCL3L12
Spinal cord layer 4 L1contraSCL4L12
Lumbar segment 2contraL23
Spinal cord layer 5 L2contraSCL5L22
Spinal cord layer 6 L2contraSCL6L22
Spinal cord layer 3 L2contraSCL3L22
Spinal cord layer 4 L2contraSCL4L22
Lumbar segment 3contraL33
Spinal cord layer 5 L3contraSCL5L32
Spinal cord layer 6 L3contraSCL6L32
Spinal cord layer 3 L3contraSCL3L32
Spinal cord layer 4 L3contraSCL4L32
Intermediate zone L3contraizVHL3-0.5
Spinal cord layer 7 L3contraSCL7L3-0.5
Spinal cord layer 8 L3contraSCL8L3-0.5
Lumbar segment 4contraL42
Spinal cord layer 5 L4contraSCL5L42
Spinal cord layer 6 L4contraSCL6L42
Spinal cord layer 3 L4contraSCL3L42
Spinal cord layer 4 L4contraSCL4L42
Intermediate zone L4contraizVHL4-0.5
Spinal cord layer 7 L4contraSCL7L4-0.5
Spinal cord layer 8 L4contraSCL8L4-0.5
Lumbar segment 5contraL52
Spinal cord layer 5 L5contraSCL5L52
Spinal cord layer 6 L5contraSCL6L52
Spinal cord layer 3 L5contraSCL3L52
Spinal cord layer 4 L5contraSCL4L52
Intermediate zone L5contraizVHL5-0.5
Spinal cord layer 7 L5contraSCL7L5-0.5
Spinal cord layer 8 L5contraSCL8L5-0.5
Lumbar segment 6contraL63
Spinal cord layer 5 L6contraSCL5L62
Spinal cord layer 6 L6contraSCL6L62
Spinal cord layer 3 L6contraSCL3L62
Spinal cord layer 4 L6contraSCL4L62
Intermediate zone L6contraizVHL6-0.5
Spinal cord layer 7 L6contraSCL7L6-0.5
Spinal cord layer 8 L6contraSCL8L6-0.5
Sacral segment 1contraSa13
Spinal cord layer 5 S1contraSCL5S12
Spinal cord layer 6 S1contraSCL6S12
Spinal cord layer 3 S1contraSCL3S12
Spinal cord layer 4 S1contraSCL4S12
Sacral segment 2contraSa23
Spinal cord layer 5 S2contraSCL5S22
Spinal cord layer 6 S2contraSCL6S22
Spinal cord layer 3 S2contraSCL3S22
Spinal cord layer 4 S2contraSCL4S22
Sacral segment 3contraSa31
Spinal cord layer 5 S3contraSCL5S32
Spinal cord layer 6 S3contraSCL6S32
Spinal cord layer 3 S3contraSCL3S32
Spinal cord layer 4 S3contraSCL4S32
Sacral segment 4contraSa41
Spinal cord layer 5 S4contraSCL5S42
Spinal cord layer 6 S4contraSCL6S42
Spinal cord layer 3 S4contraSCL3S42
Spinal cord layer 4 S4contraSCL4S42
Coccygeal segment 1contraCo11
Coccygeal segment 2contraCo21
Coccygeal segment 3contraCo31
Central grayipsiCG3
Central gray dorsomedialipsiCGDM-0.5
Central gray pons partipsiCGP3
Medial longitudinal fasciculusipsimlf3
Paralemniscal nucleusipsiPL-1
Nucleus of DarkschewitschipsiDk1
Periaqueductal grayipsiPAG3
Aqueductal part of periaqueductal grayipsiAPAG1
Lateral periaqueductal grayipsiLPAG1
Periaqueductal gray dorsal partipsiPAGd1
Ventral periaqueductal grayipsiVPAG2
Ventrolateral periaqueductal grayipsiVLPAG1.5
Periventricular gray matteripsiPVG-0.5
Superior colliculusipsiSC4
Intermediate gray layer of the superior colliculusipsiInG-0.5
Intermediate white layer of the superior colliculusipsiInWh-0.5
Intermediate white layer lower part of the superior colliculusipsiInWh2-0.5
Superior colliculus deep layersipsiSCd2
Deep gray layer of the superior colliculusipsiDpG-0.5
Tegmental areaipsiTGA-0.5
Central tegmental fieldipsiTGAC2
Mesopontine tegmental areaipsiTGAm2
Peduncularpontine nucleusipsiPPN-0.5
Peduncularpontine nucleus caudal levelsipsiPPNCa-0.5
Subpeduncular tegmental nucleusipsiSPTg0
Substantia nigra A9ipsiSN3
Substantia nigra compact partipsiSNC3
Substantia nigra compact part dorsal tieripsiSNCD2
Substantia nigra compact part ventral tier dopaminergic neuron populationipsiSNCVdopa0.5
Substantia nigra lateral partipsiSNL3
Substantia nigra reticular partipsiSNR3
Substantia nigra reticular part central divisionipsiSNRce-0.5
Substantia nigra reticular part lateral tieripsiSNRL-0.5
Substantia nigra reticular part medial tieripsiSNRm1
Substantia nigra reticular part rostrolateral subdivisionipsiSNRRL-0.5
Substantia nigra reticular part ventral subdivisionipsiSNRv1
Substantia nigra reticular part ventrolateral tieripsiSNRVL-0.5
Substantia nigra reticular part ventromedial tieripsiSNRVM1
Ventral tegmental area A10ipsiVTA3
Parabrachial pigmented nucleusipsiPBP2
Caudal linear nucleus of the rapheipsiCLi3
Retrorubral nucleusipsiRR2.5
Laterodorsal tegmental nucleusipsiLDTg3
Laterodorsal tegmental nucleus rostral halfipsiLDTgrh3
Dorsal tegmental nucleusipsiDTg3
Dorsal tegmental nucleus dorsal partipsiDTgD0
Dorsal tegmental nucleus lateral partipsiDLTN2
Ventromedial part of the ventral aprt of the dorsal tegmental nucleusipsiDTgVVM0
Pedunculopontine tegmental nucleusipsiPPTg1
Pedunculopontine tegmental nucleus pars compactaipsiPPNC2
Pedunculopontine tegmental nucleus pars dissipataipsiPPNd-0.5
Interstitial nucleus of CajalipsiInC1
Lateral cerebellar nucleus rostral partipsiCERLr0.5
A5 noradrenaline cellsipsiA50
Barringtons nucleusipsiBar1
Locus coeruleusipsiLC4
Locus coeruleus rostral partipsiLCRo3
Nucleus incertusipsiNI0
Nucleus incertus pars dissipataipsiNId0.5
Caudal pons dorsal groupipsiPcaD-0.5
Central part of the pontis caudalisipsiPcaCe-0.5
Medioventral part of the nucleus pontis oralisipsiPorMV-0.5
Pontomesencephalic grayipsiPoMG-0.5
Dorsomedial tegmental areaipsiDMTg1
Prepositus nucleusipsiPr2
Reticular systemipsiRF3
Intermediate reticular nucleusipsiIRt0
Mesencephalic reticular formationipsiMRF1
Deep mesencephalic nucleusipsiDpMe2
Deep mesencephalic nucleus lateral partipsiDpMeL2
Deep mesencephalic nucleus medial partipsiDpMeM1
Pontine reticular nucleus oral partipsiPnO1
Pontine reticular nucleus ventral partipsiPnV0
Pontine reticular nucleus caudal partipsiPNC-0.5
Cuneiforme nucleusipsiCnF2
Dorsomedial cuneiforme nucleusipsiCnFdm3
Parabrachial nucleusipsiPB3
Central medial parabrachial nucleus waistipsiCMPBw-1
Lateral parabrachial nucleus external partipsiLPBE-1
Lateral parabrachial nucleus ventral partipsiLPBV-1
Medial parabrachial nucleus external partipsiMPBE-1
Gigantocellular reticular nucleusipsiGi-0.5
Gigantocellular reticular nucleus alpha partipsiGiA-0.5
Lateral reticular nucleusipsiLRt3
Medullary reticular nucleusipsiMdD0
Subnucleus reticularis dorsalisipsiSRD0
Medullary reticular nucleus ventrolateral partipsiMdVL-0.5
Medullary reticular nucleus ventral partipsiMdV0
Parvicellular reticular nucleusipsiPCRt-0.5
Subcoeruleus nucleusipsiSubC1
Subcoeruleus nucleus dorsal partipsiSubCD1
MyelencephalonipsiMYC3
Medulla oblongataipsiMeOb-0.5
Facial nucleus caudal partipsi7c-0.5
Mesencephalic trigeminal nucleusipsiMe53
Principal sensory trigeminal nucleusipsiPr52
Spinal trigeminal nucleus caudal partipsiSp5C0.5
Spinal trigeminal nucleus interpolar partipsiSp5I1.5
Spinal trigeminal nucleus interpolar part caudalipsiSp5Ic-0.5
Spinal trigeminal nucleus oral partipsiSp5O0.5
Vestibular nucleiipsiVnc0
Medial vestibular nucleus caudal partipsiMVeP1
Medial vestibular nucleus intermediate partipsiMVei1
Medial vestibular nucleus ventromedial partipsiMVevm1
Nucleus of the solitary tractipsiSol1
Nucleus of the solitary tract dorsal partipsiSolD-0.5
Parasolitary nucleusipsiPSol0
Dorsal motor nucleus of vagusipsi100
Raphe nucleiipsiRAN2
Dorsal raphe nucleusipsiDR3
Dorsal raphe nucleus caudal partipsiDRC3
Dorsal raphe nucleus dorsal partipsiDRD3
Dorsal raphe nucleus rostral partipsiDRr3
Dorsal raphe nucleus ventral partipsiDRV3
Dorsal raphe nucleus ventrolateral partipsiDRVL4
Rostral linear nucleus of the rapheipsiRLi3
Median raphe nucleusipsiMnR3
Paramedian raphe nucleusipsiPMnR3
Pontine raphe nucleusipsiPnR1
Raphe interpositus nucleusipsiRIP1
Raphe magnus nucleusipsiRMg1
Raphe obscurus nucleusipsiROb1
Raphe pallidus nucleusipsiRPa1
Rostral ventrolateral medullaipsiRVLM0
Cuneate nucleusipsiCu1.5
GracileipsiGra1.5
Gracile nucleus principal partipsiGr0
Nucleus of BischoffipsiNBi0.5
Medulla oblongata rostral partipsiMeObR-0.5
Obexipsiobex-0.5
Inferior oliveipsiIO1
Paragigantocellular reticular nucleusipsiPGi2
Dorsal paragigantocellular nucleusipsiDPGi0
Lateral paragigantocellular nucleusipsiLPGi0
Ventral medulla oblongataipsiVMeO-0.5
Ventral part of the ventral medulla oblongataipsiVMeOV-0.5
Basal forebrainipsiBAF3
Dorsal endopiriform nucleusipsiDEn-0.5
Rostrocaudal extent of the ventral endopiriform nucleusipsiVEnRC1
Islands of CallejaipsiICj2
Diagonal band of BrocaipsiDBB2
Nucleus of the horizontal limb of the diagonal bandipsiHDB3
Lateral part of the nucleus of the horizontal limb of the diagonal bandipsiLPHDB0
Nucleus of the vertical limb of the diagonal bandipsiVDB2
Nucleus of the vertical limb of the diagonal band lateral partipsiVDBL0
Medial septal nucleusipsiMS0
Basal nucleus MeynertipsiB2.5
Basal nucleus Meynert caudal partipsiBca2.5
Substantia innominataipsiSI3
Substantia innominata anterior partipsiSIA-0.5
Substantia innominata dorsal partipsiSID2
Substantia innominata rostral aspectipsiSIr2.5
Substantia innominata ventromedial partipsiSIvm1
Preoptic regionipsiPREO2
Intermediate hypothalamic cell groupsipsiIHCG3
Lateral preoptic areaipsiLPO3
Lateral preoptic area anterior limitipsiLPOaL-0.5
Medial preoptic areaipsiMPA3
Medial preoptic area dorsolateral partipsiMPADL1
Median preoptic areaipsiMnPA-0.5
Magnocellular preoptic nucleusipsiMCPO-0.5
Medial preoptic nucleusipsiMPO1
Median preoptic nucleusipsiMnPO3
Tuberomammillary nucleusipsiTuM3
Dorsal cap of the vascular organ of the lamina terminalisipsiVOLTdc3
Lateral aspect of the vascular organ of the lamina terminalisipsiLVOLT3
HypothalamusipsiHYPO-0.5
Dorsomedial hypothalamic nucleusipsiDMHy2
Lateral zoneipsiLHA2
Lateral hypothalamic areaipsiLH4
Lateral hypothalamic area perifornical partipsiPFx4
Tuberal division of the lateral hypothalamic areaipsiLHTC-0.5
Medial division of the hypothalamusipsiMdH-0.5
Anterior hypothalamic areaipsiAHA2
Anterior hypothalamic nucleusipsiAHn1
Dorsal hypothalamic areaipsiDA2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM4
Posterior hypothalamic nucleus caudal partipsiPHCa1
Posterior hypothalamic nucleus rostral partipsiPHRo1
Tuberal areaipsiTA-0.5
Ventromedial hypothalamic nucleusipsiVMH3
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL1.5
Arcuate nucleusipsiArc3
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]ipsiPaMP-0.5
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAP-0.5
Ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsivPaAP-0.5
Adjacent to the ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAPav-0.5
Paraventricular hypothalamic nucleusipsiPa2
Anterior part of periventricular parvocellular subdivision of paraventricular hypothalamic nucleusipsiPVPapvA-0.5
Suprachiasmatic nucleusipsiSCh3
Suprachiasmatic nucleus dorsal divisionipsiSChd-0.5
Supraoptic hypothalamic partipsiSOHYP0
Incerto hypothalamic areaipsiicHYPO-0.5
Medial mammillary nucleus lateral partipsiML1
Medial mammillary nucleus medial partipsiMM-3
Medial mammillary nucleus median partipsiMMnm3
Medial mammillary nucleus posterior partipsiMMNp-1
Premammillary nucleus ventral partipsiPMV1
Supramammillar nucleusipsiSuM-0.5
Supramammillar nucleus lateral part lateral subpartipsiSuMLL2
Supramammillar nucleus lateral part medial subpartipsiSuMLM3
Supramammillar nucleus medial partipsiSuMM1
A8 dopamine cells retrorubral groupipsiRRF1
Perifornical nucleusipsiPeF3
ThalamusipsiT3
Central medial thalamic nucleusipsiCM0
Central medial thalamic nucleus rostral partipsiCMr1
Centrolateral thalamic nucleusipsiCL3
Parafascicular thalamic nucleus lateral partipsiPFL1
Rhomboid thalamic nucleusipsiRh-0.5
Mediodorsal thalamic nucleusipsiMD0
Intermediodorsal thalamic nucleusipsiIMD1
Mediodorsal thalamic nucleus central partipsiMDC2
Mediodorsal thalamic nucleus medial partipsiMDM3
Rostral three fourth of the mediodorsal thalamic nucleusipsiMDrtf2
Mediodorsal thalamic nucleus rostrocaudal partipsiMDrc2
Midline group of the dorsal thalamusipsiMTN2
Paratenial thalamic nucleusipsiPT0
Paraventricular thalamic nucleusipsiPV-0.5
Paraventricular thalamic nucleus anterior partipsiPVA0
Paraventricular thalamic nucleus caudal partipsiPVca1
Paraventricular thalamic nucleus dorsal partipsiPVdo1
Paraventricular thalamic nucleus posterior partipsiPVP0
Paraventricular thalamic nucleus rostral partipsiPVr1
Paraventricular thalamic nucleus ventral partipsiPVV1
Reuniens thalamic nucleusipsiRe1
Subfornical organipsiSFO-0.5
Outer part of the subfornical organipsiSFOO3
Reticular thalamic nucleusipsiRt3
Reticular thalamic nucleus anteroventral partipsiRtAV1
Reticular thalamic nucleus medial partipsiRtm-0.5
Subparafascicular thalamic nucleusipsiSPF2
Subparafascicular thalamic nucleus rostral partipsiSPFr1
Zona incertaipsiZI3
Nucleus of the fields of ForelipsiF0.5
HabenulaipsiHAB0
Lateral habenular nucleusipsiLHb2
Lateral habenular nucleus lateral partipsiLHbL3
Pretectal regionipsiPRT2
Anterior pretectal nucleusipsiAPT-0.5
Amygdaloid complexipsiAC2
Supranuclear divisionsipsiSUD0.5
Basal nucleusipsiBnc2
Accessory basal nucleusipsiAB2
Basolateral amygdaloid nucleusipsiBL1
Anterior basolateral nucleusipsiBLA2
Anterior basolateral nucleus caudomedial partipsiBLAcm0.5
Anterior basolateral nucleus medial partipsiBLAM3
External borders of the basolateral amygdalaipsiEBBL-0.5
Internal border of the basolateral amygdalaipsiiBBL-0.5
Middle third of basolateral amygdaloid nucleusipsiBLmt3
Posterior basolateral nucleusipsiBLP2
Medial external capsule dorsal to posterior basolateral amygdaloid nucleusipsiBLPmec3
Posterior basolateral nucleus caudal partipsiBLPc3
Ventral basolateral nucleusipsiBLV-0.5
Basomedial amygdaloid nucleusipsiBM1
Lateral amygdaloid nucleusipsiLA0
Bed nucleus of the stria terminalisipsiBST2
Bed nucleus of the stria terminalis fusiform partipsiFu3
Bed nucleus of the stria terminalis intraamygdaloid divisionipsiBSTIA3
Bed nucleus of the stria terminalis lateral divisionipsiBSTL1
Bed nucleus of the stria terminalis ventral partipsiBNSTv2
Bed nucleus of the stria terminalis ventral tipipsiBNSTvt1
Central amygdaloid nucleusipsiCe2
Central amygdaloid nucleus medial divisionipsiCeM3
Central amygdaloid nucleus rostral partipsiCerp1.5
Interstitial nucleus of the posterior limb of the anterior commissure lateral partipsiIPACL1
Sublenticular extended amygdalaipsiSLEA2
Anterior amygdaloid areaipsiAA3
Anterior cortical amygdaloid nucleusipsiACo3
Posterolateral cortical nucleusipsiPLCo1
Nucleus of the lateral olfactory tractipsiLOT3
Nucleus of the lateral olfactory tract layer 2ipsiLOTL21
Periamygdaloid complexipsiPAC2
Medial amygdaloid nucleusipsiMe3
Medial amygdaloid nucleus anteroventral partipsiMeAV1
Medial amygdaloid nucleus caudal partipsiMeC3
Medial amygdaloid nucleus posteroventral partipsiMePV-3
Amygdalohippocampal areaipsiAHi2
White matter dorsal to amygdalohippocampal areaipsiAHiwm2
Posteromedial cortical nucleusipsiPMCo-0.5
Intercalated nuclei of the amygdalaipsiI-0.5
Anterior part of the claustrumipsiACl2
Medial part of claustrumipsiMCl3
Globus pallidusipsiGP2
Caudal globus pallidusipsiGPc1
Lateral globus pallidusipsiLGP2
Medial globus pallidusipsiMGP2
Medial globus pallidus rostral partipsiMGPr1
Rostral globus pallidusipsiGPr1
Caudal subpallidal regionipsiCaSuPa-0.5
Ventral pallidumipsiVP3
Ventral pallidum caudal partipsiVPc-0.5
Ventral pallidum dorsal partipsiVPd1
Ventral pallidum dorsolateral partipsiVPdl1
Ventral pallidum dorsomedial partipsiVPdm2
Ventral pallidum lateral partipsiVPlp3
Ventral pallidum medial partipsiVPm3
Ventral pallidum rostral partipsiVPr1
Ventral pallidum ventrolateral partipsiVPvl2
Fingers of the ventral pallidum that cap the islands of CallejaipsiVPfic-0.5
Globus pallidus central partipsiGPce2
Sublenticular subcommissural extrapallidal areaipsiSXP2
Accumbens nucleusipsiAc2
Accumbens nucleus coreipsiAcbC1
Accumbens nucleus shellipsiAcbSh1
Medial accumbensipsiAcbM-0.5
Anteroventral segment of the striatumipsiCPuav-0.5
Ventral striatumipsiCPuv-3
Parasubthalamic nucleusipsiPSTh3
Bed nucleus of the anterior commissureipsiBAC0
Entorhinal cortexipsiEnt1
Lateral entorhinal cortexipsiLEnt1
Piriform cortexipsiPir1
Anterior piriform cortex layer 6ipsiAPIRCPIRlL62.5
Anterior piriform cortex ventrolateral partipsiAPIRCvL-0.5
Central piriform cortexipsiCPC2
Piriform cortex deep layersipsiPirLd1
Prepiriform cortexipsiPRPIR-0.5
Prepiriform cortex layer 2ipsiPRPIRLa21
Prepiriform cortex layer 3ipsiPRPIRLa31
Prepiriform cortex layer 6ipsiPRPIRLa6-0.5
Retrosplenial regionsipsiRS-0.5
Cerebral cortex layer 1ipsiCCL10
Limbic regionsipsiLR-0.5
Cingulate cortexipsiCg3
Anterior cingulate cortexipsiACC3
Anterior cingulate cortex layer 5ipsiACCL51
Anterior cingulate cortex layer 6ipsiACCL63
Anterior cingulate cortex rostral partipsiACCr3
Cingulate cortex area 1ipsiCg13
Cingulate cortex area 1 caudal partipsiCg1c2
Cingulate cortex area 2 caudal partipsiCg2c2
Cingulate cortex area 3ipsiCg33
Cingulate cortex area 3 layer 6ipsiCg3L6-0.5
Dorsal anterior cingulate cortexipsiDACC3
Cingulate cortex layer 5ipsiCgL53
Cingulate cortex layer 6ipsiCgL63
Posterior cingulate cortexipsiPCC1
Posterior half of the cingulate cortexipsiPCCh0
Prelimbic cortexipsiPrL3
Prelimbic cortex caudal partipsiPrLc3
Prelimbic cortex dorsal partipsiPrLd3
Prelimbic cortex dorsal part layer 6ipsiPrLdL6-0.5
Prelimbic cortex layer 2ipsiPrLL2-0.5
Prelimbic cortex layer 3ipsiPrLL30.5
Prelimbic cortex layer 5ipsiPrLL52
Prelimbic cortex layer 6ipsiPrLL62
Prelimbic cortex rostral partipsiPrLr3
Prelimbic cortex ventral partipsiPrLv3
Infralimbic cortexipsiIL3
Infralimbic cortex layer 2ipsiILL2-0.5
Infralimbic cortex deep layersipsiILDL2
Infralimbic cortex layer 6ipsiILL63
Infralimbic cortex layer 3ipsiILL30.5
NeocortexipsiNEOCX-0.5
Frontal association cortexipsiFrA3
Frontal cortex area 2ipsiFr23
Frontal cortex medial aspectipsiFrAma3
Insular cortexipsiICX3
Agranular insular cortexipsiAI2
Agranular insular cortex dorsal partipsiAID2.5
Agranular insular cortex intermediate partipsiAIim2
Agranular insular cortex layer 5ipsiAIL51
Agranular insular cortex layer 6ipsiAIL61
Agranular insular cortex layer 1ipsiAIL12
Agranular insular cortex layer 3ipsiAIL32
Agranular insular cortex posterior partipsiAIP1
Agranular insular cortex posterior part pressor siteipsiAIPp1
Agranular insular cortex rostral partipsiRAIC3
Agranular insular cortex rostral caudal partipsiRCAIC2
Agranular insular cortex ventral partipsiAIV2.5
Agranular insular cortex ventral part jaw movement areaipsiAIVjm-0.5
Dysgranular insular cortex layer 5ipsiDIL5-0.5
Gustatory dysgranular insular cortex layer 5ipsiDIgL51
Gustatory dysgranular insular cortex layer 6ipsiDIgL61
Gustatory dysgranular insular cortex layer 2ipsiDIgL20.5
Gustatory dysgranular insular cortex layer 3ipsiDIgL30.5
Gustatory dysgranular insular cortex layer 4ipsiDIgL40.5
Dorsal part of the granular insular cortex rostroventrally adjacent to the rostralmost part of S2ipsidGlrvs20
Medial insular cortexipsiICXM3
Perirhinal cortexipsiA35-0.5
Perirhinal cortex anterior portionipsiPRha3
Perirhinal cortex anterior portion layer 3 to layer 5ipsiPRhaL3L50
Perirhinal cortex anterior portion layer 5 to layer 6ipsiPRhaL5L61
Perirhinal cortex anterior portion layer 6ipsiPRhaL62.5
Dorsal peduncular cortexipsiDP2.5
Ventral peduncular cortexipsiPCv2.5
Prefrontal cortexipsiPFC3
Prefrontal cortex dorsomedial part layer 4ipsiPFCdmL41
Prefrontal cortex dorsomedial part layer 5ipsiPFCdmL53
Prefrontal cortex dorsomedial part layer 6ipsiPFCdmL63
Prefrontal cortex layer 5ipsiPFCL53
Prefrontal cortex layer 6ipsiPFCL63
Motoric regionsipsiM2
Lateral prefrontal cortexipsilPFC-0.5
Lateral agranular prefrontal cortexipsiAGl3
Rostral part of lateral agranular prefrontal cortexipsiAGlr1
Medial prefrontal cortexipsimPFC1
Medial prefrontal cortex layer 5ipsimPFCL5-0.5
Medial prefrontal cortex layer 5 type 1 pyramidal cellipsimPFCL5t1-0.5
Medial agranular prefrontal cortexipsiAGm3
Medial agranular prefrontal cortex medial partipsimAGm3
Medial agranular prefrontal cortex rostral partipsirAGm2
Posterior part of the medial agranular prefrontal cortexipsiPoAGm-0.5
Sensory regionsipsiSR-0.5
Primary somatosensory cortexipsiS10.5
Primary somatosensory cortex rostral partipsiS1r0
Ventral medial prefrontal cortexipsivmPFC-0.5
Medial extrastriate cortexipsiVISM2
Orbitofrontal cortexipsiOrFCx-0.5
Anterior medial frontal cortexipsiAMFC1
Orbital cortexipsiOrC1
Lateral orbital cortexipsiLO3
Medial orbital cortexipsiMO3
Ventral orbital cortexipsiVO3
Ventrolateral orbital areaipsiVLO3
Lateral orbitofrontal cortexipsiLOFC-0.5
Ventral orbitofrontal cortexipsiVOFC-0.5
Nucleus of the posterior commissureipsiPCom2
Intergeniculate leafipsiIGL-0.5
Ventral lateral geniculate nucleusipsiVLG-0.5
Ventral lateral geniculate nucleus magnocellular partipsiVLGMC1
Ventral lateral geniculate nucleus parvicellular partipsiVLGPC4
Interpeduncular nucleusipsiIP3
Interpeduncular nucleus lateral subnucleusipsiIPL2
Interpeduncular nucleus medial part ventral partipsiIPMV1
Interpeduncular nucleus paramedian partipsiIPPM1
Interpeduncular nucleus rostrolateral subnucleusipsiIPRL2
Olfactory tubercleipsiTuO2.5
Olfactory tubercle anterior partipsiTuOA2.5
Olfactory tubercle deep layersipsiTuODL1
Olfactory tubercle deep pallidal layeripsiTuODpL2
Olfactory tubercle polymorph layeripsiTuOpo2
Olfactory tubercle polymorph layer rostral partipsiTuOpoR-0.5
Olfactory tubercle rostral partipsiTuOr-0.5
Dorsal medial septumipsiDMS0
Dorsolateral septumipsiDLSER0
Septofimbrial nucleusipsiSFi3
Triangular septal nucleusipsiTS3
Ventrolateral septal regionipsiVLSER0
3d ventricleipsi3V-2
Gray matter of the floor of the 4th ventricleipsiGMF4V0
Ependyma and subependymal layeripsiE-2
Lateral cervical nucleusipsiLatC1
Lateral spinal nucleusipsiMESLn1
Ventral root C1ipsivrC1-2
Spinal cord layer 1 C1ipsiSCL1C1-0.5
Ventral root C2ipsivrC2-2
Spinal cord layer 1 C2ipsiSCL1C2-0.5
Ventral root C3ipsivrC3-2
Ventral root C4ipsivrC4-2
Ventral root C5ipsivrC5-2
Cervical segment 6ipsiCS6-0.5
Ventral root C6ipsivrC6-2
Cervical segment 7ipsiCS7-0.5
Ventral root C7ipsivrC7-2
Lateral spinal nucleus C7ipsiLSpC71.5
Area X C7ipsiSCL10C70
Spinal cord layer 5 C7ipsiSCL5C70.5
Spinal cord layer 3 C7ipsiSCL3C70.5
Spinal cord layer 4 C7ipsiSCL4C70.5
Spinal cord layer 1 C7ipsiSCL1C70.5
Spinal cord layer 2 C7ipsiSCL2C70.5
Cervical segment 8ipsiCS8-0.5
Ventral root C8ipsivrC8-2
Thoracal segment 1ipsiT1-0.5
Thoracal segment 6ipsiT60
Thoracal segment 7ipsiT70
Thoracal segment 8ipsiT80
Thoracal segment 9ipsiT90
Thoracal segment 10ipsiT10-0.5
Spinal cord layer 1 L1ipsiSCL1L12
Spinal cord layer 2 L1ipsiSCL2L11
Lumbar segment 3ipsiL3-0.5
Lumbar segment 4ipsiL4-0.5
Lumbar segment 6ipsiL60.5
Spinothalamic tract projection neuronsipsiSTTP-0.5
LungipsiOrgsLung-10
Trachea sideipsiOrgsTras2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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