University of Rostock

Department of Anatomy

Neuroscience Group

  Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Parabrachial nucleus medial right


Abbreviation
PBnMe
Color       
Superior regionsParabrachial nucleus

SynonymsAbbr.Language
 PBm 
Parabrachial nucleus medial part  
Medial parabrachial nucleusMPBEng
Parabrachial nucleus medialPBnMeEng
Parabrachial nucleus medial division Eng
Medial subnucleus of the parabrachial nucleus  
Medial part of the parabrachial regionMPBEng
Media parabrachial nucleusPbmEng
Medial parabrachial nucleus Eng
Medial parabrachial nucleusMPBEng
Parabrachial nucleus subnucleus medialis Eng
Medial part of parabrachial nucleus Eng
Medial part of the parabrachial area Eng

SubregionsSide
Central part of the medial parabrachial nucleusright
Medial parabrachial nucleus external partright
Medial parabrachial nucleus lateral partright
Medial parabrachial nucleus medial divisionright
Medial parabrachial nucleus rostral lateral portionright
Parabrachial nucleus medial caudodorsal regionright
Parabrachial nucleus medial caudoventral partright
Parabrachial nucleus medial crescentright
Pontine taste arearight
Ventral part of the medial subnucleus of the parabrachial nucleusright
Dorsolateral part of the medial parabrachial nucleusright
Rostral two third of the medial parabrachial nucleusright
Caudal medial part of the medial parabrachial nucleusright
Dorsal medial subnucleus of the parabrachial nucleusright
Caudal part of the medial parabrachial nucleusright
Ventrolateral part of the parabrachial nucleus medialright
Rostral part of the parabrachial nucleus medialright
Parabrachial nucleus medial halfright

Output to

NameSideAbbr.WeightDetails
Ventrolateral periaqueductal graycontraVLPAG2
Commissural nucleus of the inferior colliculuscontraCom-0.5
Intermediate gray layer of the superior colliculuscontraInG1
Superior colliculus medial partcontramSC0
Midbrain extrapyramidal areacontraMEA0.5
Pedunculopontine tegmental nucleuscontraPPTg0.5
Barringtons nucleuscontraBar2
Pontine tegmental fieldcontraPTF0
Dorsolateral reticular formationcontraDLRF-0.5
Paramedian reticular nucleuscontraPMn-0.5
Ventrolateral reticular formationcontraVLRF-0.5
Ventromedial reticular formationcontraVMRF-0.5
Reticular formation adjacent to the nucleus ambiguuscontraRFaA-0.5
Mesencephalic reticular formationcontraMRF1
Deep mesencephalic nucleus dorsal partcontraDpMeD2
Pontine reticular nucleuscontraPRN1
Pontine reticular nucleus oral partcontraPnO1
Pontine reticular nucleus caudal partcontraPNC1
Parabrachial nucleuscontraPB0
Lateral parabrachial nucleuscontraLPB1
Parabrachial nucleus medialcontraPBnMe1
Gigantocellular reticular nucleuscontraGi1
Parvicellular reticular nucleus caudal portioncontrapRNc-0.5
Ambiguus nucleuscontraAmb-0.5
Ambiguus nucleus caudal partcontraAmbc2
Ambiguus nucleus rostral partcontraAmbR2
Boetzinger complexcontraBo1
Facial nucleuscontra7-0.5
Facial nucleus lateral subnucleuscontra7L2
Hypoglossal nucleuscontra12S0.5
Trigeminal sensory nuclear complexcontraTSNC2
Principal sensory trigeminal nucleuscontraPr52
Spinal trigeminal nucleuscontraSp5nc-0.5
Spinal trigeminal nucleus caudal partcontraSp5C2
Spinal trigeminal nucleus interpolar partcontraSp5I2
Spinal trigeminal nucleus oral partcontraSp5O2
Superior vestibular nucleuscontraSuVe0.5
Medial vestibular nucleuscontraMVe2
Lateral vestibular nucleus alpha partcontraLVNa0.5
Lateral vestibular nucleus beta partcontraLVNb2
Lateral vestibular nucleus gamma partcontraLVNg0.5
Inferior vestibular nucleuscontraIVN0.5
Nucleus of the solitary tractcontraSol1
Raphe nucleicontraRAN-0.5
Dorsal raphe nucleus lateral wingcontraDRlw1
Midline apneic sitecontraMAS2
Ventral lateral medulla oblongatacontraMVL0.5
Rostral ventrolateral medullacontraRVLM2
Rostral ventrolateral medulla sympathetic premotor neuronscontraRVLMspn-0.5
Caudoventral respiratory groupcontraCVRG1
Intercalated nucleus of the medullacontraIn-0.5
Lateral paragigantocellular nucleuscontraLPGi0.5
Retrofacial nucleuscontraRFN3
Retrotrapezoid nucleuscontraRTN1
Rostral ventral respiratory groupcontraRVRG1
Subretrofacial nucleuscontraSuReFa0.5
Basal forebraincontraBAF1.5
Substantia innominatacontraSI2
Substantia innominata dorsal partcontraSID1
Magnocellular preoptic nucleuscontraMCPO2
Median preoptic nucleuscontraMnPO3
Posterior region [Lateral division of the hypothalamus]contraPReg0
Lateral hypothalamic areacontraLH1
Lateral hypothalamic area posterior partcontraLHAp1
Medial division of the hypothalamuscontraMdH1
Paraventricular hypothalamic nucleuscontraPa1
A8 dopamine cells retrorubral groupcontraRRF1
Parafascicular thalamic nucleus rostral partcontraPFr2
Parafascicular thalamic nucleus ventral partcontraPFV1
Submedius thalamic nucleuscontraSub1
Dorsal retroreuniens areacontraRREd-0.5
Caudomedial part of the ventral posterior thalamic complex medial partcontraVPTmcm3
Ventral posterior thalamic nucleus parvicellular partcontraVPPC3
Ventrobasal complexcontraVB-0.5
Ventral posteromedial thalamic nucleus parvicellular partcontraVPMpc-0.5
Dorsocaudal ventral posteromedial thalamic nucleus parvicellular partcontraVPMpcdc-0.5
Ethmoid thalamic nucleuscontraEth0.5
Intralaminar nucleicontraILN2
Parafascicular nucleuscontraPFa-0.5
Caudal part of the oval paracentral thalamic nucleuscontraCOPC-0.5
Subparafascicular thalamic nucleus caudal partcontraSPFc0.5
Subparafascicular thalamic nucleus rostral partcontraSPFr0.5
Zona incertacontraZI0
Ventromedial crossingcontravmc-2
Cisterna cerebellomedullariscontraCistcm-3
Basolateral amygdaloid nucleuscontraBL1
Bed nucleus of the stria terminaliscontraBST0.5
Bed nucleus of the stria terminalis caudal part caudoventral regioncontraBSTCacv1
Bed nucleus of the stria terminalis caudal part perifornical regioncontraBSTCapf1
Bed nucleus of the stria terminalis lateral divisioncontraBSTL2
Bed nucleus of the stria terminalis lateral division dorsal partcontraBSTLD1
Bed nucleus of the stria terminalis lateral division ventral partcontraBSTLV0.5
Bed nucleus of the stria terminalis medial divisioncontraBSTM2
Central amygdaloid nucleuscontraCe-0.5
Central amygdaloid nucleus lateral divisioncontraCeL-0.5
Central amygdaloid nucleus lateral division capsular partcontraCeC-0.5
Central amygdaloid nucleus medial divisioncontraCeM1
Continuum area between central amygdaloid nucleus and bed nucleus of the stria terminalis lateral partcontraCeBSTL1
Anterior amygdaloid areacontraAA1
Medial amygdaloid nucleuscontraMe0.5
Ventral pallidumcontraVP1
Medial accumbens shellcontraAcbShm1
Fundus of the striatumcontraFS1
Anterior cingulate cortexcontraACC-0.5
Infralimbic cortexcontraIL1
Frontal polar cortexcontraFP1
Agranular insular cortexcontraAI0.5
Granular insular cortexcontraGI1
Granular insular cortex layer 3contraGIL31
Granular insular cortex layer 5contraGIL51
Granular insular cortex layer 6contraGIL61
Olfacto septal areacontraOSA1
Olfactory tuberclecontraTuO-0.5
Lateral septal nucleuscontraLS1
Dorsal horn C1contraDHC12
Dorsal horn C2contraDHC22
Dorsal horn C3contraDHC32
Phrenic motoneurons of lamina 9 C3contraPh9C31
Dorsal horn C4contraDHC42
Ventral horn C4contraVHC42
Cervical segment 5contraCS50.5
Dorsal horn C5contraDHC52
Dorsal horn C6contraDHC62
Dorsal horn C7contraDHC72
Dorsal horn C8contraDHC82
Dorsal horn T1contraDHT12
Dorsal horn T2contraDHT22
Dorsal horn T3contraDHT32
Dorsal horn T4contraDHT42
Dorsal horn T5contraDHT52
Dorsal horn T6contraDHT62
Dorsal horn T7contraDHT72
Dorsal horn T8contraDHT82
Dorsal horn T9contraDHT92
Dorsal horn T10contraDHT102
Intermediolateral cell column T11contraIMLT110
Dorsal horn T11contraDHT112
Dorsal horn T12contraDHT122
Dorsal horn T13contraDHT132
Dorsal horn L1contraDHL12
Lumbar segment 2contraL20
Dorsal horn L2contraDHL22
Dorsal horn L3contraDHL32
Dorsal horn L4contraDHL42
Dorsal horn L5contraDHL52
Dorsal horn L6contraDHL62
Nucleus of DarkschewitschipsiDk0
Oculomotor nucleusipsi31
Periaqueductal grayipsiPAG2
Lateral periaqueductal grayipsiLPAG2
Ventral periaqueductal grayipsiVPAG2
Ventrolateral periaqueductal grayipsiVLPAG3
Periventricular gray matteripsiPVG-2
Commissural nucleus of the inferior colliculusipsiCom-0.5
Intermediate gray layer of the superior colliculusipsiInG0
Superior colliculus medial partipsimSC0
Midbrain extrapyramidal areaipsiMEA1.5
Substantia nigra A9ipsiSN2
Ventral tegmental area A10ipsiVTA3
Retrorubral nucleusipsiRR-2
Laterodorsal tegmental nucleusipsiLDTg2
Pedunculopontine tegmental nucleusipsiPPTg1
Edinger Westphal nucleusipsiEW2
Locus coeruleusipsiLC2
Locus coeruleus caudal partipsiLCca-1
Locus coeruleus posterior partipsiLCp2.5
Locus coeruleus rostral partipsiLCRo-1
Locus coeruleus ventrolateral partipsiLCvL2.5
Pontine tegmental fieldipsiPTF0
Prepositus nucleusipsiPr2
Probst's tract medullaipsiprbm-2
Ventromedial branch of Probst's bundleipsivmbprb-2
Dorsolateral reticular formationipsiDLRF-0.5
Paramedian reticular nucleusipsiPMn2
Rostroventrolateral reticular nucleusipsiRVL0
Ventrolateral reticular formationipsiVLRF-0.5
Ventromedial reticular formationipsiVMRF-0.5
Reticular formation adjacent to the nucleus ambiguusipsiRFaA-0.5
Mesencephalic reticular formationipsiMRF2
Deep mesencephalic nucleus dorsal partipsiDpMeD3
Pontine reticular nucleusipsiPRN1
Pontine reticular nucleus oral partipsiPnO1
Parabrachial nucleusipsiPB2
Koelliker Fuse nucleusipsiKF2
Parabrachial nucleus caudal partipsiPBca-2
Parabrachial nucleus ventral part lateral portionipsiPBVL1
Gigantocellular reticular nucleusipsiGi2
Medullary reticular nucleusipsiMdD1
Medullary reticular nucleus ventrolateral part rostral partipsiMdVLR3
Parvicellular reticular nucleusipsiPCRt3
Parvicellular reticular nucleus caudal portionipsipRNc-0.5
Trapezoid bodyipsitz1.5
Ambiguus nucleusipsiAmb2
Ambiguus nucleus caudal partipsiAmbc3
Ambiguus nucleus rostral partipsiAmbR3
Boetzinger complexipsiBo2
Facial nucleusipsi71
Facial nucleus lateral subnucleusipsi7L3
Facial nucleus medial partipsi7M2
Hypoglossal nucleusipsi12S0.5
Hypoglossal motor nucleusipsi12M1
Hypoglossal nucleus ventral partipsi12SV-0.5
Dorsal part of the hypoglossal nucleusipsi12SD-0.5
Mesencephalic trigeminal nucleus caudal poleipsiMe5cp-2
Motor trigeminal nucleusipsiMo51
Motor trigeminal nucleus ventromedial partipsiMo5VM1
Trigeminal sensory nuclear complexipsiTSNC2
Principal sensory trigeminal nucleusipsiPr52
Spinal trigeminal nucleusipsiSp5nc-0.5
Spinal trigeminal nucleus caudal partipsiSp5C2
Spinal trigeminal nucleus interpolar partipsiSp5I2
Spinal trigeminal nucleus oral partipsiSp5O2
Superior vestibular nucleusipsiSuVe2
Medial vestibular nucleusipsiMVe2
Lateral vestibular nucleusipsiLVe0
Lateral vestibular nucleus alpha partipsiLVNa2
Lateral vestibular nucleus beta partipsiLVNb2
Lateral vestibular nucleus gamma partipsiLVNg2
Inferior vestibular nucleusipsiIVN2
Nucleus of the solitary tractipsiSol3
Nucleus of the solitary tract commissural partipsiSolC-0.5
Nucleus of the solitary tract medial partipsiSolM-0.5
Nucleus of the solitary tract rostral partipsiSolro1
Nucleus of the solitary tract rostrolateral partipsiSolRL-0.5
Nucleus of the solitary tract ventrolateral partipsiSolVL1
Dorsal motor nucleus of vagusipsi100
Raphe nucleiipsiRAN-0.5
Dorsal raphe nucleusipsiDR3
Dorsal raphe nucleus dorsal partipsiDRD2
Dorsal raphe nucleus dorsomedial subdivisionipsiDRdm2
Dorsal raphe nucleus dorsomedian partipsiDRdmm2
Dorsal raphe nucleus lateral wingipsiDRlw3
Dorsal raphe nucleus caudal midlineipsiDRcmip0.5
Dorsal raphe nucleus rostral partipsiDRr3
Dorsal raphe nucleus ventral partipsiDRV2
Dorsal raphe nucleus ventromedial subdivisionipsiDRvme2
Median raphe nucleusipsiMnR2
Central raphe nucleusipsiCRN3
Midline apneic siteipsiMAS2
Pontine raphe nucleusipsiPnR2
Raphe magnus nucleusipsiRMg1
Raphe obscurus nucleusipsiROb1
Ventral lateral medulla oblongataipsiMVL3
Caudal ventrolateral medullaipsiCVLM1
Caudal ventrolateral medulla lateral partipsiCVLMl1
Rostral ventrolateral medullaipsiRVLM3
Rostral ventrolateral medulla sympathetic premotor neuronsipsiRVLMspn-0.5
Caudoventral respiratory groupipsiCVRG1.5
Caudoventral reticular nucleusipsiCVL1
Ventral respiratory group caudal partipsiVCReG1
Intercalated nucleus of the medullaipsiIn-0.5
Paragigantocellular reticular nucleusipsiPGi2
Lateral paragigantocellular nucleusipsiLPGi1.5
Retrofacial nucleusipsiRFN3
Retrotrapezoid nucleusipsiRTN3
Rostral ventral respiratory groupipsiRVRG1.5
Choroidea innervating part of the superior salivatory nucleusipsiCSSN-10
Subretrofacial nucleusipsiSuReFa1
Basal forebrainipsiBAF2
Diagonal band of BrocaipsiDBB2
Nucleus of the horizontal limb of the diagonal bandipsiHDB3
Basal nucleus MeynertipsiB1
Substantia innominataipsiSI3
Substantia innominata dorsal partipsiSID2
Substantia innominata posterodorsal partipsiSIpd-0.5
Preoptic regionipsiPREO1
Lateral preoptic areaipsiLPO2
Magnocellular preoptic nucleusipsiMCPO3
Medial preoptic nucleusipsiMPO0
Median preoptic nucleusipsiMnPO3
Caudal lateral hypothalamic nucleusipsiTMSbgclh2.5
Dorsomedial hypothalamic nucleusipsiDMHy3
Posterior region [Lateral division of the hypothalamus]ipsiPReg0
Perifornical hypothalamic area [Preoptic anterior region]ipsiPFxPAR3
Lateral zoneipsiLHA1
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area anterior partipsiLHAa1
Lateral hypothalamic area suprafornical regionipsiLHAs-0.5
Caudal levels of the suprafornical areaipsiLHAsC1
Lateral hypothalamic area suprafornical area at the level of superior lateral subnucleusipsiLHAsLSL1
Lateral hypothalamic area suprafornical region at the level of the internal lateral subnucleusipsiLHAsiLs1
Lateral hypothalamic area posterior partipsiLHAp3
Lateral hypothalamic nucleusipsiLHN1
Tuberal region of lateral hypothalamusipsiTuLH2
Lateral hypothalamic area [Lateral zone mammillary level]ipsiLHLZM2
Medial division of the hypothalamusipsiMdH1
Medial zoneipsiMHA0
Area lateralis hypothalamicus posterior [Regio hypothalamus caudalis]ipsiDMrhc-0.5
Dorsal hypothalamic areaipsiDA1
Dorsomedial hypothalamic areaipsiDMHyA0
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM0
Parastriatal nucleusipsiPS2
Posterior hypothalamic area dorsal partipsiPHD3
Ventromedial hypothalamic nucleusipsiVMH-0.5
Paraventricular hypothalamic nucleus lateral parvocellular partipsiLPPa-0.5
Paraventricular hypothalamic nucleus medial parvocellular partipsiMPPa-0.5
Paraventricular hypothalamic nucleus magnocellular part [Periventricular zone anterior region]ipsiPaAM-0.5
Paraventricular hypothalamic nucleusipsiPa3
Subparaventricular zone of the hypothalamusipsiSPa-0.5
Suprachiasmatic nucleusipsiSCh0
Supraoptic nucleus [Supraoptic region]ipsiSO0
Supraoptic nucleus perinuclear zoneipsiSOpnz0
Supraoptic hypothalamic partipsiSOHYP0
A8 dopamine cells retrorubral groupipsiRRF3
Intralaminar nuclei of the dorsal thalamusipsiILM2
Central medial thalamic nucleusipsiCM4
Central medial thalamic nucleus ventrolateral partipsiCMVL-0.5
Ventrocaudal central medial thalamic nucleusipsiCMVC-0.5
Centrolateral thalamic nucleusipsiCL3
Parafascicular thalamic nucleusipsiPF3
Parafascicular thalamic nucleus rostral partipsiPFr3
Parafascicular thalamic nucleus ventral partipsiPFV1
Parafascicular thalamic nucleus dorsocaudal partipsiPFdc-0.5
Rhomboid thalamic nucleusipsiRh2
Posterior thalamic nuclear groupipsiPo3
Intermediodorsal thalamic nucleusipsiIMD4
Submedius thalamic nucleusipsiSub2
Paraventricular thalamic nucleusipsiPV-0.5
Paraventricular thalamic nucleus posterior partipsiPVP3
Retroreuniens areaipsiRRE4
Dorsal retroreuniens areaipsiRREd-0.5
Reuniens thalamic nucleusipsiRe1
Lateral ventroposteromedial thalamic nucleusipsiLVPM1
Ventral posterior thalamic complex medial partipsiVPTm2
Caudomedial part of the ventral posterior thalamic complex medial partipsiVPTmcm1
Ventral posterior thalamic nucleus parvicellular partipsiVPPC3
Dorsal half of the ventral posterior thalamic nucleus parvicellular partipsiVPPCdh1
Dorsal part of the ventral posterior thalamic nucleus parvicellular partipsiVPPCd1
Caudodorsal extent of the ventral posterior thalamic nucleus parvicellular partipsiVPPCcd2
Ventral half of the ventral posterior thalamic nucleus parvicellular partipsiVPPCvh2.5
Rostral pole of the ventral posterior thalamic nucleus parvicellular partipsiVPPCrp0
Ventral posterolateral thalamic nucleusipsiVPL1
Ventral posterolateral thalamic nucleus caudal partipsiVPLca2
Ventral posteromedial thalamic nucleusipsiVPM2.5
Ventral posteromedial thalamic nucleus parvicellular partipsiVPMpc3
Dorsocaudal ventral posteromedial thalamic nucleus parvicellular partipsiVPMpcdc-0.5
Rostral part of the ventral posteromedial thalamic nucleus parvicellular partipsiVPMpcr-0.5
Ventromedial thalamic nucleusipsiVM2
Basal nucleus of the ventromedial thalamic nucleusipsiVMB-0.5
Ventral posterolateral thalamic nucleus parvicellular partipsiVPLpc1
Ethmoid thalamic nucleusipsiEth0.5
Intralaminar nucleiipsiILN3
Laterodorsal thalamic nucleusipsiLD2
Oval paracentral thalamic nucleusipsiOPC3
Caudal part of the oval paracentral thalamic nucleusipsiCOPC-0.5
Posterior groupipsiPTG1
Posteromedial thalamic nucleusipsiPMTN1
Reticular thalamic nucleusipsiRt1
Subparafascicular thalamic nucleusipsiSPF2
Subparafascicular thalamic nucleus caudal partipsiSPFc2
Subparafascicular thalamic nucleus rostral partipsiSPFr2
Ventral medial nucleus of the thalamusipsiVMT2
Zona incertaipsiZI2
Lateral habenular nucleusipsiLHb2
Medial reticulospinal pathwayipsimrsp-2
Cisterna cerebellomedullarisipsiCistcm-3
Basolateral amygdaloid nucleusipsiBL2
Anterior basolateral nucleusipsiBLA0.5
Posterior basolateral nucleusipsiBLP1
Basomedial amygdaloid nucleusipsiBM2
Lateral amygdaloid nucleusipsiLA2
Bed nucleus of the stria terminalisipsiBST2
Bed nucleus of the stria terminalis anterior divisionipsiBSTA4
Bed nucleus of the stria terminalis caudal part caudoventral regionipsiBSTCacv1
Bed nucleus of the stria terminalis caudal part perifornical regionipsiBSTCapf1
Bed nucleus of the stria terminalis dorsolateral partipsiBSTDL3
Bed nucleus of the stria terminalis lateral divisionipsiBSTL2
Bed nucleus of the stria terminalis lateral division dorsal partipsiBSTLD2
Bed nucleus of the stria terminalis lateral division ventral partipsiBSTLV4
Bed nucleus of the stria terminalis medial divisionipsiBSTM2
Central amygdaloid nucleusipsiCe2
Central amygdaloid nucleus lateral divisionipsiCeL1
Central amygdaloid nucleus lateral division capsular partipsiCeC-0.5
Central amygdaloid nucleus medial divisionipsiCeM3
Central amygdaloid nucleus rostral partipsiCerp-0.5
Interstitial nucleus of the posterior limb of the anterior commissureipsiIPAC-0.5
Interstitial nucleus of the posterior limb of the anterior commissure medial partipsiIPACM1
Continuum area between central amygdaloid nucleus and bed nucleus of the stria terminalis lateral partipsiCeBSTL2
Anterior amygdaloid areaipsiAA2
Medial amygdaloid nucleusipsiMe2
ClaustrumipsiCl1
Globus pallidusipsiGP2
Ventral pallidumipsiVP2
Ventral pallidum medial partipsiVPm1
Accumbens nucleusipsiAc2
Accumbens nucleus shellipsiAcbSh-0.5
Dorsomedial shellipsiAcbShdm-0.5
Medial accumbens shellipsiAcbShm1
Caudate putamenipsiCPu-0.5
Fundus of the striatumipsiFS2
Parasubthalamic nucleusipsiPSTh3
Cerebral cortexipsiCEC3
HippocampusipsiHIPP2
Subiculum ventral partipsiSv1
Septohippocampal nucleusipsiSHi1
Cingulate cortexipsiCg3
Anterior cingulate cortexipsiACC-0.5
Infralimbic cortexipsiIL3
Infralimbic cortex rostral partipsiILR1
Frontal cortex area 2ipsiFr23
Frontal polar cortexipsiFP2
Frontal polar cortex lateral partipsiFPl2
Insular cortexipsiICX2
Agranular insular cortexipsiAI1
Agranular insular cortex dorsal partipsiAID1
Agranular insular cortex rostral partipsiRAIC2
Anterior insular cortexipsiICXa1
Granular insular cortexipsiGI2
Granular insular cortex layer 3ipsiGIL32
Granular insular cortex layer 5ipsiGIL52
Granular insular cortex layer 6ipsiGIL62
Prefrontal cortexipsiPFC3
Motoric regionsipsiM2
Forelimb motor cortexipsiFMCx1
Caudal forelimb motor areaipsiCFMA1
Lateral part of the granular cortex of forelimb motor regionsipsiLFMCx1
Sensory regionsipsiSR1
Dorsal somatosensory regionipsiDSR0
Visual regionsipsiVR3
Olfacto septal areaipsiOSA3
Olfactory tubercleipsiTuO1
Septal regionipsiSER-0.5
Lateral septal nucleusipsiLS3
Ventral septal regionipsiVSER2
Spinal cordipsiMES-0.5
Cardioacceleratory sympathetic preganglionic neurons in the intermediolateral nucleusipsiIMLcas1
Area X C1ipsiSCL10C11
Dorsal horn C1ipsiDHC12
Spinal cord layer 5 C1ipsiSCL5C11
Spinal cord layer 6 C1ipsiSCL6C11
Spinal cord layer 3 C1ipsiSCL3C11
Spinal cord layer 4 C1ipsiSCL4C11
Spinal cord layer 1 C1ipsiSCL1C11
Spinal cord layer 2 C1ipsiSCL2C11
Spinal cord layer 7 C1ipsiSCL7C11
Spinal cord layer 8 C1ipsiSCL8C11
Spinal cord layer 9 C1ipsiSCL9C11
Area X C2ipsiSCL10C21
Dorsal horn C2ipsiDHC22
Spinal cord layer 5 C2ipsiSCL5C21
Spinal cord layer 6 C2ipsiSCL6C21
Spinal cord layer 3 C2ipsiSCL3C21
Spinal cord layer 4 C2ipsiSCL4C21
Spinal cord layer 1 C2ipsiSCL1C21
Spinal cord layer 2 C2ipsiSCL2C21
Spinal cord layer 7 C2ipsiSCL7C21
Spinal cord layer 8 C2ipsiSCL8C21
Spinal cord layer 9 C2ipsiSCL9C21
Area X C3ipsiSCL10C31
Dorsal horn C3ipsiDHC32
Spinal cord layer 5 C3ipsiSCL5C31
Spinal cord layer 6 C3ipsiSCL6C31
Spinal cord layer 3 C3ipsiSCL3C31
Spinal cord layer 4 C3ipsiSCL4C31
Spinal cord layer 1 C3ipsiSCL1C31
Spinal cord layer 2 C3ipsiSCL2C31
Spinal cord layer 7 C3ipsiSCL7C31
Spinal cord layer 8 C3ipsiSCL8C31
Phrenic motoneurons of lamina 9 C3ipsiPh9C33
Spinal cord layer 9 C3ipsiSCL9C31
Area X C4ipsiSCL10C41
Dorsal horn C4ipsiDHC42
Spinal cord layer 5 C4ipsiSCL5C41
Spinal cord layer 6 C4ipsiSCL6C41
Spinal cord layer 3 C4ipsiSCL3C41
Spinal cord layer 4 C4ipsiSCL4C41
Spinal cord layer 1 C4ipsiSCL1C41
Spinal cord layer 2 C4ipsiSCL2C41
Ventral horn C4ipsiVHC42
Spinal cord layer 7 C4ipsiSCL7C41
Spinal cord layer 8 C4ipsiSCL8C41
Phrenic motoneurons of lamina 9 C4ipsiPh9C41
Spinal cord layer 9 C4ipsiSCL9C41
Cervical segment 5ipsiCS50.5
Area X C5ipsiSCL10C51
Dorsal horn C5ipsiDHC52
Spinal cord layer 5 C5ipsiSCL5C51
Spinal cord layer 6 C5ipsiSCL6C51
Spinal cord layer 3 C5ipsiSCL3C51
Spinal cord layer 4 C5ipsiSCL4C51
Spinal cord layer 1 C5ipsiSCL1C51
Spinal cord layer 2 C5ipsiSCL2C51
Ventral horn C5ipsiVHC50.5
Spinal cord layer 7 C5ipsiSCL7C51
Spinal cord layer 8 C5ipsiSCL8C51
Phrenic motoneurons of lamina 9 C5ipsiPh9C51
Spinal cord layer 9 C5ipsiSCL9C51
Area X C6ipsiSCL10C61
Dorsal horn C6ipsiDHC62
Spinal cord layer 5 C6ipsiSCL5C61
Spinal cord layer 6 C6ipsiSCL6C61
Spinal cord layer 3 C6ipsiSCL3C61
Spinal cord layer 4 C6ipsiSCL4C61
Spinal cord layer 1 C6ipsiSCL1C61
Spinal cord layer 2 C6ipsiSCL2C61
Spinal cord layer 7 C6ipsiSCL7C61
Spinal cord layer 8 C6ipsiSCL8C61
Spinal cord layer 9 C6ipsiSCL9C61
Area X C7ipsiSCL10C71
Dorsal horn C7ipsiDHC72
Spinal cord layer 5 C7ipsiSCL5C71
Spinal cord layer 6 C7ipsiSCL6C71
Spinal cord layer 3 C7ipsiSCL3C71
Spinal cord layer 4 C7ipsiSCL4C71
Spinal cord layer 1 C7ipsiSCL1C71
Spinal cord layer 2 C7ipsiSCL2C71
Spinal cord layer 7 C7ipsiSCL7C71
Spinal cord layer 8 C7ipsiSCL8C71
Spinal cord layer 9 C7ipsiSCL9C71
Area X C8ipsiSCL10C81
Dorsal horn C8ipsiDHC82
Spinal cord layer 5 C8ipsiSCL5C81
Spinal cord layer 6 C8ipsiSCL6C81
Spinal cord layer 3 C8ipsiSCL3C81
Spinal cord layer 4 C8ipsiSCL4C81
Spinal cord layer 1 C8ipsiSCL1C81
Spinal cord layer 2 C8ipsiSCL2C81
Spinal cord layer 7 C8ipsiSCL7C81
Spinal cord layer 8 C8ipsiSCL8C81
Spinal cord layer 9 C8ipsiSCL9C81
Cervical enlargementipsiCSegE-0.5
Area X T1ipsiSCL10T11
Dorsal horn T1ipsiDHT10.5
Spinal cord layer 5 T1ipsiSCL5T11
Spinal cord layer 6 T1ipsiSCL6T11
Spinal cord layer 3 T1ipsiSCL3T11
Spinal cord layer 4 T1ipsiSCL4T11
Spinal cord layer 1 T1ipsiSCL1T11
Spinal cord layer 2 T1ipsiSCL2T11
Spinal cord layer 7 T1ipsiSCL7T11
Spinal cord layer 8 T1ipsiSCL8T11
Spinal cord layer 9 T1ipsiSCL9T11
Area X T2ipsiSCL10T21
Dorsal horn T2ipsiDHT20.5
Spinal cord layer 5 T2ipsiSCL5T21
Spinal cord layer 6 T2ipsiSCL6T21
Spinal cord layer 3 T2ipsiSCL3T21
Spinal cord layer 4 T2ipsiSCL4T21
Spinal cord layer 1 T2ipsiSCL1T21
Spinal cord layer 2 T2ipsiSCL2T21
Spinal cord layer 7 T2ipsiSCL7T21
Spinal cord layer 8 T2ipsiSCL8T21
Spinal cord layer 9 T2ipsiSCL9T21
Area X T3ipsiSCL10T31
Dorsal horn T3ipsiDHT30.5
Spinal cord layer 5 T3ipsiSCL5T31
Spinal cord layer 6 T3ipsiSCL6T31
Spinal cord layer 3 T3ipsiSCL3T31
Spinal cord layer 4 T3ipsiSCL4T31
Spinal cord layer 1 T3ipsiSCL1T31
Spinal cord layer 2 T3ipsiSCL2T31
Spinal cord layer 7 T3ipsiSCL7T31
Spinal cord layer 8 T3ipsiSCL8T31
Spinal cord layer 9 T3ipsiSCL9T31
Area X T4ipsiSCL10T41
Dorsal horn T4ipsiDHT40.5
Spinal cord layer 5 T4ipsiSCL5T41
Spinal cord layer 6 T4ipsiSCL6T41
Spinal cord layer 3 T4ipsiSCL3T41
Spinal cord layer 4 T4ipsiSCL4T41
Spinal cord layer 1 T4ipsiSCL1T41
Spinal cord layer 2 T4ipsiSCL2T41
Spinal cord layer 7 T4ipsiSCL7T41
Spinal cord layer 8 T4ipsiSCL8T41
Spinal cord layer 9 T4ipsiSCL9T41
Area X T5ipsiSCL10T51
Dorsal horn T5ipsiDHT50.5
Spinal cord layer 5 T5ipsiSCL5T51
Spinal cord layer 6 T5ipsiSCL6T51
Spinal cord layer 3 T5ipsiSCL3T51
Spinal cord layer 4 T5ipsiSCL4T51
Spinal cord layer 1 T5ipsiSCL1T51
Spinal cord layer 2 T5ipsiSCL2T51
Spinal cord layer 7 T5ipsiSCL7T51
Spinal cord layer 8 T5ipsiSCL8T51
Spinal cord layer 9 T5ipsiSCL9T51
Area X T6ipsiSCL10T61
Dorsal horn T6ipsiDHT60.5
Spinal cord layer 5 T6ipsiSCL5T61
Spinal cord layer 6 T6ipsiSCL6T61
Spinal cord layer 3 T6ipsiSCL3T61
Spinal cord layer 4 T6ipsiSCL4T61
Spinal cord layer 1 T6ipsiSCL1T61
Spinal cord layer 2 T6ipsiSCL2T61
Spinal cord layer 7 T6ipsiSCL7T61
Spinal cord layer 8 T6ipsiSCL8T61
Spinal cord layer 9 T6ipsiSCL9T61
Area X T7ipsiSCL10T71
Dorsal horn T7ipsiDHT70.5
Spinal cord layer 5 T7ipsiSCL5T71
Spinal cord layer 6 T7ipsiSCL6T71
Spinal cord layer 3 T7ipsiSCL3T71
Spinal cord layer 1 T7ipsiSCL1T71
Spinal cord layer 4 T7ipsiSCL4T71
Spinal cord layer 2 T7ipsiSCL2T71
Spinal cord layer 7 T7ipsiSCL7T71
Spinal cord layer 8 T7ipsiSCL8T71
Spinal cord layer 9 T7ipsiSCL9T71
Area X T8ipsiSCL10T81
Dorsal horn T8ipsiDHT80.5
Spinal cord layer 5 T8ipsiSCL5T81
Spinal cord layer 6 T8ipsiSCL6T81
Spinal cord layer 3 T8ipsiSCL3T81
Spinal cord layer 4 T8ipsiSCL4T81
Spinal cord layer 1 T8ipsiSCL1T81
Spinal cord layer 2 T8ipsiSCL2T81
Spinal cord layer 7 T8ipsiSCL7T81
Spinal cord layer 8 T8ipsiSCL8T81
Spinal cord layer 9 T8ipsiSCL9T81
Area X T9ipsiSCL10T91
Dorsal horn T9ipsiDHT90.5
Spinal cord layer 5 T9ipsiSCL5T91
Spinal cord layer 6 T9ipsiSCL6T91
Spinal cord layer 3 T9ipsiSCL3T91
Spinal cord layer 4 T9ipsiSCL4T91
Spinal cord layer 1 T9ipsiSCL1T91
Spinal cord layer 2 T9ipsiSCL2T91
Spinal cord layer 7 T9ipsiSCL7T91
Spinal cord layer 8 T9ipsiSCL8T91
Spinal cord layer 9 T9ipsiSCL9T91
Area X T10ipsiSCL10T101
Dorsal horn T10ipsiDHT100.5
Spinal cord layer 5 T10ipsiSCL5T101
Spinal cord layer 6 T10ipsiSCL6T101
Spinal cord layer 3 T10ipsiSCL3T101
Spinal cord layer 4 T10ipsiSCL4T101
Spinal cord layer 1 T10ipsiSCL1T101
Spinal cord layer 2 T10ipsiSCL2T101
Spinal cord layer 7 T10ipsiSCL7T101
Spinal cord layer 8 T10ipsiSCL8T101
Spinal cord layer 9 T10ipsiSCL9T101
Intermediolateral cell column T11ipsiIMLT110
Area X T11ipsiSCL10T111
Dorsal horn T11ipsiDHT110.5
Spinal cord layer 5 T11ipsiSCL5T111
Spinal cord layer 6 T11ipsiSCL6T111
Spinal cord layer 3 T11ipsiSCL3T111
Spinal cord layer 4 T11ipsiSCL4T111
Spinal cord layer 1 T11ipsiSCL1T111
Spinal cord layer 2 T11ipsiSCL2T111
Spinal cord layer 7 T11ipsiSCL7T111
Spinal cord layer 8 T11ipsiSCL8T111
Spinal cord layer 9 T11ipsiSCL9T111
Area X T12ipsiSCL10T121
Dorsal horn T12ipsiDHT120.5
Spinal cord layer 5 T12ipsiSCL5T121
Spinal cord layer 6 T12ipsiSCL6T121
Spinal cord layer 3 T12ipsiSCL3T121
Spinal cord layer 4 T12ipsiSCL4T121
Spinal cord layer 1 T12ipsiSCL1T121
Spinal cord layer 2 T12ipsiSCL2T121
Spinal cord layer 7 T12ipsiSCL7T121
Spinal cord layer 8 T12ipsiSCL8T121
Spinal cord layer 9 T12ipsiSCL9T121
Area X T13ipsiSCL10T131
Dorsal horn T13ipsiDHT130.5
Spinal cord layer 5 T13ipsiSCL5T131
Spinal cord layer 6 T13ipsiSCL6T131
Spinal cord layer 3 T13ipsiSCL3T131
Spinal cord layer 4 T13ipsiSCL4T131
Spinal cord layer 1 T13ipsiSCL1T131
Spinal cord layer 2 T13ipsiSCL2T131
Spinal cord layer 7 T13ipsiSCL7T131
Spinal cord layer 8 T13ipsiSCL8T131
Spinal cord layer 9 T13ipsiSCL9T131
Lumbar segment 1ipsiL1-0.5
Area X L1ipsiSCL10L11
Dorsal horn L1ipsiDHL10.5
Spinal cord layer 5 L1ipsiSCL5L11
Spinal cord layer 6 L1ipsiSCL6L11
Spinal cord layer 3 L1ipsiSCL3L11
Spinal cord layer 4 L1ipsiSCL4L11
Spinal cord layer 1 L1ipsiSCL1L11
Spinal cord layer 2 L1ipsiSCL2L11
Spinal cord layer 7 L1ipsiSCL7L11
Spinal cord layer 8 L1ipsiSCL8L11
Spinal cord layer 9 L1ipsiSCL9L11
Lumbar segment 2ipsiL20.5
Area X L2ipsiSCL10L21
Dorsal horn L2ipsiDHL20.5
Spinal cord layer 5 L2ipsiSCL5L21
Spinal cord layer 6 L2ipsiSCL6L21
Spinal cord layer 3 L2ipsiSCL3L21
Spinal cord layer 4 L2ipsiSCL4L21
Spinal cord layer 1 L2ipsiSCL1L21
Spinal cord layer 2 L2ipsiSCL2L21
Spinal cord layer 7 L2ipsiSCL7L21
Spinal cord layer 8 L2ipsiSCL8L21
Spinal cord layer 9 L2ipsiSCL9L21
Lumbar segment 3ipsiL3-0.5
Area X L3ipsiSCL10L31
Dorsal horn L3ipsiDHL30.5
Spinal cord layer 5 L3ipsiSCL5L31
Spinal cord layer 6 L3ipsiSCL6L31
Spinal cord layer 3 L3ipsiSCL3L31
Spinal cord layer 4 L3ipsiSCL4L31
Spinal cord layer 1 L3ipsiSCL1L31
Spinal cord layer 2 L3ipsiSCL2L31
Spinal cord layer 7 L3ipsiSCL7L31
Spinal cord layer 8 L3ipsiSCL8L31
Spinal cord layer 9 L3ipsiSCL9L31
Lumbar segment 4ipsiL4-0.5
Area X L4ipsiSCL10L41
Dorsal horn L4ipsiDHL40.5
Spinal cord layer 5 L4ipsiSCL5L41
Spinal cord layer 6 L4ipsiSCL6L41
Spinal cord layer 3 L4ipsiSCL3L41
Spinal cord layer 4 L4ipsiSCL4L41
Spinal cord layer 1 L4ipsiSCL1L41
Spinal cord layer 2 L4ipsiSCL2L41
Spinal cord layer 7 L4ipsiSCL7L41
Spinal cord layer 8 L4ipsiSCL8L41
Spinal cord layer 9 L4ipsiSCL9L41
Lumbar segment 5ipsiL5-0.5
Area X L5ipsiSCL10L51
Dorsal horn L5ipsiDHL50.5
Spinal cord layer 5 L5ipsiSCL5L51
Spinal cord layer 6 L5ipsiSCL6L51
Spinal cord layer 3 L5ipsiSCL3L51
Spinal cord layer 4 L5ipsiSCL4L51
Spinal cord layer 1 L5ipsiSCL1L51
Spinal cord layer 2 L5ipsiSCL2L51
Spinal cord layer 7 L5ipsiSCL7L51
Spinal cord layer 8 L5ipsiSCL8L51
Spinal cord layer 9 L5ipsiSCL9L51
Lumbar segment 6ipsiL6-0.5
Area X L6ipsiSCL10L61
Dorsal horn L6ipsiDHL60.5
Spinal cord layer 5 L6ipsiSCL5L61
Spinal cord layer 6 L6ipsiSCL6L61
Spinal cord layer 3 L6ipsiSCL3L61
Spinal cord layer 4 L6ipsiSCL4L61
Spinal cord layer 1 L6ipsiSCL1L61
Spinal cord layer 2 L6ipsiSCL2L61
Spinal cord layer 7 L6ipsiSCL7L61
Spinal cord layer 8 L6ipsiSCL8L61
Spinal cord layer 9 L6ipsiSCL9L61
Sacral segment 1ipsiSa1-0.5
Area X S1ipsiSCL10S11
Spinal cord layer 5 S1ipsiSCL5S11
Spinal cord layer 6 S1ipsiSCL6S11
Spinal cord layer 3 S1ipsiSCL3S11
Spinal cord layer 4 S1ipsiSCL4S11
Spinal cord layer 1 S1ipsiSCL1S11
Spinal cord layer 2 S1ipsiSCL2S11
Spinal cord layer 7 S1ipsiSCL7S11
Spinal cord layer 8 S1ipsiSCL8S11
Spinal cord layer 9 S1ipsiSCL9S11
Sacral segment 2ipsiSa2-0.5
Area X S2ipsiSCL10S21
Spinal cord layer 5 S2ipsiSCL5S21
Spinal cord layer 6 S2ipsiSCL6S21
Spinal cord layer 3 S2ipsiSCL3S21
Spinal cord layer 4 S2ipsiSCL4S21
Spinal cord layer 1 S2ipsiSCL1S21
Spinal cord layer 2 S2ipsiSCL2S21
Spinal cord layer 7 S2ipsiSCL7S21
Spinal cord layer 8 S2ipsiSCL8S21
Spinal cord layer 9 S2ipsiSCL9S21
Sacral segment 3ipsiSa3-0.5
Area X S3ipsiSCL10S31
Spinal cord layer 5 S3ipsiSCL5S31
Spinal cord layer 6 S3ipsiSCL6S31
Spinal cord layer 3 S3ipsiSCL3S31
Spinal cord layer 4 S3ipsiSCL4S31
Spinal cord layer 1 S3ipsiSCL1S31
Spinal cord layer 2 S3ipsiSCL2S31
Spinal cord layer 7 S3ipsiSCL7S31
Spinal cord layer 8 S3ipsiSCL8S31
Spinal cord layer 9 S3ipsiSCL9S31
Sacral segment 4ipsiSa4-0.5
Area X S4ipsiSCL10S41
Spinal cord layer 5 S4ipsiSCL5S41
Spinal cord layer 6 S4ipsiSCL6S41
Spinal cord layer 3 S4ipsiSCL3S41
Spinal cord layer 4 S4ipsiSCL4S41
Spinal cord layer 1 S4ipsiSCL1S41
Spinal cord layer 2 S4ipsiSCL2S41
Spinal cord layer 7 S4ipsiSCL7S41
Spinal cord layer 8 S4ipsiSCL8S41
Spinal cord layer 9 S4ipsiSCL9S41
Pterygopalatine ganglionipsiAutoPpG-0.5
Sympathetic nervous systemipsiSNS0
Parasympathetic nervous systemipsiPaNS3
Submandibular glandcontraOrgsSubg-10
Submandibular glandipsiOrgsSubg-10
Pancreas sidecontraOrgsPancs-0.5
Pancreas sideipsiOrgsPancs-0.5

Input from

NameSideAbbr.WeightDetails
Periaqueductal graycontraPAG0
Dorsal periaqueductal gray caudal partcontraDPAGC0
Dorsolateral periaqueductal graycontraDLPAG0
Dorsolateral periaqueductal gray caudal partcontraPAGdlc0
Dorsolateral periaqueductal gray rostral partcontraPAGdlr0
Dorsomedial periaqueductal graycontraDMPAG0.5
Lateral periaqueductal graycontraLPAG0.5
Periaqueductal gray medial partcontraPAGm0
Ventrolateral periaqueductal graycontraVLPAG1
Ventrolateral periaqueductal gray caudal partcontraPAGvlc0.5
Ventrolateral periaqueductal gray rostral partcontraPAGvlr0
Substantia nigra compact partcontraSNC-0.5
Laterodorsal tegmental nucleuscontraLDTg0.5
Pedunculopontine tegmental nucleus pars compactacontraPPNC-0.5
Medial cerebellar nucleus rostral partcontraMedR0.5
Pontine reticular nucleuscontraPRN0.5
Koelliker Fuse nucleuscontraKF1
Lateral parabrachial nucleuscontraLPB0
Parabrachial nucleus medialcontraPBnMe1
Medial medullary reticular nucleuscontraMMdD1
Parvicellular reticular nucleuscontraPCRt0.5
Area postremacontraAP-0.5
Facial nucleus lateral subnucleuscontra7L2
Spinal trigeminal nucleus caudal partcontraSp5C-0.5
Nucleus of the solitary tract commissural partcontraSolC-0.5
Nucleus of the solitary tract medial partcontraSolM-0.5
Nucleus of the solitary tract rostral partcontraSolro1
Nucleus of the solitary tract rostral polecontraSolrop1
Ventral part of the rostral nucleus of the solitary tractcontraSolroV0.5
Nucleus of the solitary tract rostrocentralcontraSolroc0.5
Retrotrapezoid nucleuscontraRTN1
Intermediate hypothalamic cell groupscontraIHCG-0.5
Lateral preoptic areacontraLPO-0.5
Medial preoptic areacontraMPA-0.5
Medial preoptic area central partcontraMPAce-0.5
Medial preoptic area lateral partcontraMPAL-0.5
Medial preoptic area medial partcontraMPAm-0.5
Median preoptic nucleuscontraMnPO-0.5
Vascular organ of the lamina terminaliscontraVOLT-0.5
Dorsomedial hypothalamic nucleuscontraDMHy-0.5
Perifornical hypothalamic area [Preoptic anterior region]contraPFxPAR-0.5
Lateral zonecontraLHA-0.5
Lateral hypothalamic areacontraLH-0.5
Lateral hypothalamic area dorsal partcontraLHd-0.5
Lateral hypothalamic area ventral partcontraLHAvp-0.5
Lateral hypothalamic area [Lateral zone mammillary level]contraLHLZM1
Posterolateral hypothalamuscontraPLHY-0.5
Dorsal hypothalamic areacontraDA-0.5
Dorsomedial hypothalamic nucleus [Medial zone]contraDM-0.5
Posterior hypothalamic nucleus caudal partcontraPHCa0.5
Posterior hypothalamic nucleus rostral partcontraPHRo0.5
Ventromedial hypothalamic nucleuscontraVMH-0.5
Ventromedial hypothalamic nucleus ventrolateral partcontraVMHVL-0.5
Periventricular zonecontraPVZ-0.5
Arcuate nucleuscontraArc-0.5
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]contraPaMP1
Paraventricular hypothalamic nucleuscontraPa-0.5
Paraventricular hypothalamic nucleus parvocellular divisioncontraPavPo-0.5
Perifornical nucleuscontraPeF-0.5
Medial part of the caudal perifornical areacontraPeFCM-0.5
Lateral part of the caudal perifornical areacontraPeFCL-0.5
Retrochiasmatic areacontraRCh-0.5
Zona incertacontraZI-0.5
Anterior pretectal nucleus caudal partcontraAPTca0.5
Anterior pretectal nucleus rostral partcontraAPTro0.5
Amygdaloid complexcontraAC-0.5
Bed nucleus of the stria terminalis lateral divisioncontraBSTL-0.5
Central amygdaloid nucleuscontraCe-1
Anterior amygdaloid areacontraAA-0.5
Intercalated nuclei of the amygdalacontraI-0.5
Ventral pallidumcontraVP-0.5
Fundus of the striatumcontraFS-0.5
Subthalamic nucleuscontraSTh-0.5
Intermediate subiculumcontraInSu-0.5
Posteriorly between fornix and the internal capsulecontrapfoic-0.5
Infralimbic cortexcontraIL1
Insular cortexcontraICX1.5
Agranular insular cortex posterior part depressor sitecontraAIPd0.5
Agranular insular cortex posterior part pressor sitecontraAIPp0.5
Middle part of the caudal one-third of the dysgranular insular cortexcontraDIvCotMi1
Caudal part of the caudal one-third of the dysgranular insular cortexcontraDIvCotC1
Rostral two-thirds of the dysgranular insular cortexcontraRDIrtt1
Caudal part of the caudal one-third of the granular insular cortexcontraGICotC1
Middle part of the caudal one-third of the granular insular cortexcontraGICotM1
Rostral two-thirds of the granular insular cortexcontraRttGI1
Insular cortex caudal partcontraICXca1
Insular cortex rostral partcontraICXR0.5
Lateral prefrontal cortexcontralPFC-0.5
Olfacto septal areacontraOSA1
Lateral septal nucleuscontraLS1
Lateral cervical nucleuscontraLatC2
Dorsal root ganglion C1contraDRGC1-0.5
Spinal cord layer 3 C1contraSCL3C12
Spinal cord layer 4 C1contraSCL4C12
Superficial dorsal horn C1contraSDHC11
Spinal cord layer 1 C1contraSCL1C12
Spinal cord layer 2 C1contraSCL2C12
Dorsal root ganglion C2contraDRGC2-0.5
Spinal cord layer 3 C2contraSCL3C22
Spinal cord layer 4 C2contraSCL4C22
Spinal cord layer 1 C2contraSCL1C22
Spinal cord layer 2 C2contraSCL2C22
Spinal cord layer 1 C3contraSCL1C30.5
Spinal cord layer 1 C4contraSCL1C40.5
Spinal cord layer 1 C5contraSCL1C50.5
Spinal cord layer 3 C6contraSCL3C60
Spinal cord layer 1 C6contraSCL1C60.5
Spinal cord layer 2 C6contraSCL2C60
Spinal cord layer 3 C7contraSCL3C70
Spinal cord layer 1 C7contraSCL1C70.5
Spinal cord layer 2 C7contraSCL2C70
Spinal cord layer 3 C8contraSCL3C80
Spinal cord layer 1 C8contraSCL1C80.5
Spinal cord layer 2 C8contraSCL2C80
Cervical enlargementcontraCSegE-0.5
Cervical enlargement dorsal horncontraCSegEd-0.5
Spinal cord layer 3 T1contraSCL3T10
Spinal cord layer 1 T1contraSCL1T10.5
Spinal cord layer 2 T1contraSCL2T10
Spinal cord layer 1 T2contraSCL1T20.5
Spinal cord layer 1 T3contraSCL1T30.5
Spinal cord layer 1 T4contraSCL1T40.5
Spinal cord layer 1 T5contraSCL1T50.5
Spinal cord layer 1 T6contraSCL1T60.5
Spinal cord layer 1 T7contraSCL1T70.5
Spinal cord layer 1 T8contraSCL1T80.5
Spinal cord layer 1 T9contraSCL1T90.5
Spinal cord layer 1 T10contraSCL1T100.5
Spinal cord layer 1 T11contraSCL1T110.5
Spinal cord layer 1 T12contraSCL1T120.5
Spinal cord layer 1 T13contraSCL1T130.5
Spinal cord layer 1 L1contraSCL1L10.5
Spinal cord layer 1 L2contraSCL1L20.5
Spinal cord layer 1 L3contraSCL1L30.5
Spinal cord layer 1 L4contraSCL1L40.5
Spinal cord layer 1 L5contraSCL1L50.5
Intermediolateral cell column L6contraIMLL60.5
Lumbar dorsal commissural nucleus L6contraLDComL60.5
Spinal cord layer 3 L6contraSCL3L60.5
Spinal cord layer 1 L6contraSCL1L60.5
Spinal cord layer 2 L6contraSCL2L60.5
Intermediolateral cell column S1contraIMLS10.5
Sacral dorsal commissural nucleus S1contraSDComS10.5
Spinal cord layer 3 S1contraSCL3S10.5
Spinal cord layer 1 S1contraSCL1S10.5
Spinal cord layer 2 S1contraSCL2S10.5
Intermediolateral cell column S2contraIMLS20.5
Sacral dorsal commissural nucleus S2contraSDComS20.5
Spinal cord layer 3 S2contraSCL3S20.5
Spinal cord layer 1 S2contraSCL1S20.5
Spinal cord layer 2 S2contraSCL2S20.5
Spinal cord layer 1 S3contraSCL1S30.5
Spinal cord layer 1 S4contraSCL1S40.5
Central gray mesencephalic partipsiCGM-1
Periaqueductal grayipsiPAG0.5
Dorsal periaqueductal gray caudal partipsiDPAGC0
Dorsolateral periaqueductal grayipsiDLPAG0.5
Dorsolateral periaqueductal gray caudal partipsiPAGdlc0
Dorsolateral periaqueductal gray rostral partipsiPAGdlr0
Dorsomedial periaqueductal grayipsiDMPAG0
Lateral periaqueductal grayipsiLPAG1.5
Periaqueductal gray medial partipsiPAGm1
Ventrolateral periaqueductal grayipsiVLPAG2.5
Ventrolateral periaqueductal gray caudal partipsiPAGvlc2
Ventrolateral periaqueductal gray rostral partipsiPAGvlr0.5
Substantia nigra A9ipsiSN-1
Substantia nigra compact partipsiSNC3
Substantia nigra compact part ventral tieripsiSNCV1
Ventral tegmental area A10ipsiVTA-3
Laterodorsal tegmental nucleusipsiLDTg1
Pedunculopontine tegmental nucleusipsiPPTg3
Pedunculopontine tegmental nucleus pars compactaipsiPPNC-0.5
Pedunculopontine tegmental nucleus caudoventral partipsiPPTgcv-0.5
Edinger Westphal nucleusipsiEW1
Lateral cerebellar nucleusipsiCERL-1
Medial cerebellar nucleusipsiMed-1
Medial cerebellar nucleus rostral partipsiMedR2
Locus coeruleusipsiLC1
Magnocellular reticular nucleusipsiNRMC1
Mesencephalic reticular formationipsiMRF-1
Pontine reticular nucleusipsiPRN1
Parabrachial nucleusipsiPB0.5
Koelliker Fuse nucleusipsiKF-2
Lateral edge of the central lateral parabrachial nucleusipsiPBCeLe-2
Parabrachial nucleus external divison lateral partipsiPBeDL-2
Medial parabrachial nucleus external partipsiMPBE-2
Gigantocellular reticular nucleusipsiGi1
Gigantocellular reticular nucleus ventral partipsiGiV1
Lateral reticular nucleusipsiLRt-1
Lateral reticular nucleus parvicellular partipsiLRtPC2
Medullary reticular nucleusipsiMdD-1
Parvicellular reticular nucleusipsiPCRt2
Parvicellular reticular nucleus rostral portionipsipRNr-0.5
Subcoeruleus nucleus dorsal partipsiSubCD1
Ambiguus nucleusipsiAmb2
Area postremaipsiAP3
Facial nucleusipsi72
Facial nucleus lateral subnucleusipsi7L3
Paratrigeminal nucleusipsiPa53
Paratrigeminal nucleus caudal partipsiPa5c-0.5
Paratrigeminal nucleus intermediate partipsiPa5i-0.5
Paratrigeminal nucleus medial partipsiPa5M-0.5
Paratrigeminal nucleus rostral partipsiPa5r-0.5
Mesencephalic trigeminal nucleus caudal poleipsiMe5cp-2
Principal sensory trigeminal nucleusipsiPr5-1
Principal sensory trigeminal nucleus dorsal partipsiPr5D-2
Spinal trigeminal nucleus caudal partipsiSp5C-0.5
Spinal trigeminal nucleus layer 1ipsiSp5ncLa1-0.5
Spinal trigeminal nucleus layer 2ipsiSp5ncLa2-0.5
Dorsal part of spinal trigeminal nucleus oral partipsiSp5OD3
Dorsomedial portion of the spinal trigeminal nucleus oral partipsiSp5ODM3
Trigeminal subnucleus caudalisipsi5SSC0.5
Vestibular nucleiipsiVnc-1
Medial vestibular nucleusipsiMVe-0.5
Medial vestibular nucleus caudal partipsiMVeP1
Inferior vestibular nucleusipsiIVN1
Nucleus of the solitary tractipsiSol3
11 beta hydroxysteroiddehydrogenase type-2 cellsipsiSolHSD21.5
Nucleus of the solitary tract commissural partipsiSolC0.5
Nucleus of the solitary tract dorsolateral partipsiSolDL0.5
Nucleus of the solitary tract medial partipsiSolM3
Nucleus of the solitary tract periventricular partipsiSolpv-0.5
Nucleus of the solitary tract rostral partipsiSolro3
Nucleus of the solitary tract rostral poleipsiSolrop-0.5
Ventral part of the rostral nucleus of the solitary tractipsiSolroV2
Parasolitary nucleusipsiPSol-1
Nucleus of the solitary tract rostrocentralipsiSolroc2
Nucleus of the solitary tract anterolateral partipsiSolaL-0.5
Juxtraventricular nucleus of the solitary tractipsiSoljux3
Raphe nucleiipsiRAN-1
Dorsal raphe nucleusipsiDR1
Dorsal raphe nucleus caudal partipsiDRC2
Dorsal raphe nucleus rostral partipsiDRr2
Median raphe nucleusipsiMnR1
Rostral ventrolateral medullaipsiRVLM1
Dorsal column nucleiipsiDCN0.5
Lateral paragigantocellular nucleusipsiLPGi0
Retrotrapezoid nucleusipsiRTN3
Rostral ventral respiratory groupipsiRVRG3
Rostral part of the ventromedial medulla oblongataipsiRMeObvm3
Substantia innominataipsiSI3
Substantia innominata dorsal partipsiSID-0.5
Substantia innominata dorsolateral partipsiSIdL-0.5
Intermediate hypothalamic cell groupsipsiIHCG1
Lateral preoptic areaipsiLPO2
Medial preoptic areaipsiMPA-0.5
Medial preoptic area central partipsiMPAce2
Medial preoptic area lateral partipsiMPAL2
Medial preoptic area medial partipsiMPAm2
Medial preoptic area dorsolateral partipsiMPADL1
Magnocellular preoptic nucleusipsiMCPO-1
Median preoptic nucleusipsiMnPO-0.5
Extended ventrolateral preoptic nucleusipsieVLPO0
Ventrolateral preoptic nucleus clusteripsiVLPOc0
Vascular organ of the lamina terminalisipsiVOLT-0.5
Dorsomedial hypothalamic nucleusipsiDMHy1
Perifornical hypothalamic area [Preoptic anterior region]ipsiPFxPAR2
Region of tuber cinereumipsiTCReg-1
Lateral zoneipsiLHA3
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area dorsal partipsiLHd2.5
Lateral hypothalamic area lateral partipsiLHAL2.5
Lateral hypothalamic area perifornical partipsiPFx3
Lateral hypothalamic area posterior partipsiLHAp-0.5
Lateral hypothalamic area rostral partipsiLHro1
Lateral hypothalamic area ventral partipsiLHAvp1
Peduncular part of lateral hypothalamusipsiPLH-0.5
Lateral hypothalamic area [Lateral zone mammillary level]ipsiLHLZM3
Magnocellular nucleus of the lateral hypothalamusipsiMCLH-0.5
Posterolateral hypothalamusipsiPLHY-0.5
Tuberal division of the lateral hypothalamic areaipsiLHTC2
Anterior hypothalamic areaipsiAHA1
Dorsal hypothalamic areaipsiDA2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM3
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM3
Parastriatal nucleusipsiPS2
Posterior hypothalamic areaipsiPHA3
Posterior hypothalamic area dorsal partipsiPHD-0.5
Posterior hypothalamic nucleus caudal partipsiPHCa1.5
Posterior hypothalamic nucleus rostral partipsiPHRo1
Ventromedial hypothalamic nucleusipsiVMH1
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL1.5
Periventricular zoneipsiPVZ1
Arcuate nucleusipsiArc-0.5
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]ipsiPaMP1
Paraventricular hypothalamic nucleus magnocellular part [Periventricular zone anterior region]ipsiPaAM-1
Paraventricular hypothalamic nucleusipsiPa3
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo-0.5
Ventral hypothalamic regionipsiVHR2
Supramammillar nucleusipsiSuM2
Perifornical nucleusipsiPeF2
Medial part of the caudal perifornical areaipsiPeFCM1
Lateral part of the caudal perifornical areaipsiPeFCL2
Retrochiasmatic areaipsiRCh-0.5
Retrochiasmatic area lateral partipsiRChL1
Parafascicular thalamic nucleusipsiPF-1
Parafascicular thalamic nucleus ventral partipsiPFV2
Paraventricular thalamic nucleusipsiPV2
Zona incertaipsiZI-0.5
Zona incerta ventral partipsiZIV2
HabenulaipsiHAB2
Lateral habenular nucleus lateral partipsiLHbL-0.5
Anterior pretectal nucleus caudal partipsiAPTca1
Anterior pretectal nucleus rostral partipsiAPTro1
Internal capsuleipsiic-0.5
Basal nucleusipsiBnc-1
Anterior basomedial nucleusipsiBMA0.5
Bed nucleus of the stria terminalisipsiBST2
Bed nucleus of the stria terminalis anterior lateral areaipsiBSTAL1
Bed nucleus of the stria terminalis oval nucleusipsiBSTo1
Bed nucleus of the stria terminalis dorsolateral partipsiBSTDL1
Bed nucleus of the stria terminalis lateral divisionipsiBSTL-0.5
Bed nucleus of the stria terminalis lateral division posterior partipsiBSTLP3
Bed nucleus of the stria terminalis lateral division ventral partipsiBSTLV2
Bed nucleus of the stria terminalis medial division ventral partipsiBSTMV1
Bed nucleus of the stria terminalis posterolateral partipsiBSTPL3
Bed nucleus of the stria terminalis rostral part of the posterolateral partipsiBSTRPL-0.5
Bed nucleus of the stria terminalis preoptic partipsiBSTPO1
Bed nucleus of the stria terminalis ventral lateral partipsiBNSTvL1
Bed nucleus of the stria terminalis ventral tipipsiBNSTvt1
Central amygdaloid nucleusipsiCe-0.5
Central amygdaloid nucleus lateral divisionipsiCeL2
Central amygdaloid nucleus medial divisionipsiCeM3
Central amygdaloid nucleus medial division rostral partipsiCeMR-0.5
Central amygdaloid nucleus rostral partipsiCerp2
Anterior amygdaloid areaipsiAA-0.5
Medial amygdaloid nucleusipsiMe2
Intercalated nuclei of the amygdalaipsiI-0.5
Ventral pallidumipsiVP-0.5
Fundus of the striatumipsiFS-0.5
Subthalamic nucleusipsiSTh-0.5
Parasubthalamic nucleusipsiPSTh2.5
Posteriorly between fornix and the internal capsuleipsipfoic-0.5
Infralimbic cortexipsiIL3
Infralimbic cortex rostral partipsiILR1
Parietal association cortexipsiPtA-1
Insular cortexipsiICX3
Agranular insular cortex dorsal partipsiAID-0.5
Agranular insular cortex posterior part depressor siteipsiAIPd1
Agranular insular cortex posterior part pressor siteipsiAIPp3
Agranular insular cortex rostral thirdipsiRAICt2
Gustatory dysgranular insular cortexipsiDIg-0.5
Middle part of the caudal one-third of the dysgranular insular cortexipsiDIvCotMi3
Caudal part of the caudal one-third of the dysgranular insular cortexipsiDIvCotC3
Rostral two-thirds of the dysgranular insular cortexipsiRDIrtt3
Rostral third of the dysgranular insular cortexipsiRDIt2
Caudal part of the caudal one-third of the granular insular cortexipsiGICotC3
Middle part of the caudal one-third of the granular insular cortexipsiGICotM3
Rostral two-thirds of the granular insular cortexipsiRttGI3
Insular cortex caudal partipsiICXca3
Ventral part of the caudal insular cortexipsiICXvca3
Insular cortex caudal part dorsal granular subdivisionipsiICXcadg1
Ventral caudal half of the insular cortexipsiICXvcah3
Insular cortex rostral partipsiICXR3
Prefrontal cortexipsiPFC-1
Lateral prefrontal cortexipsilPFC-0.5
Forelimb motor cortexipsiFMCx1
Caudal forelimb motor areaipsiCFMA1
Lateral part of the granular cortex of forelimb motor regionsipsiLFMCx1
Olfacto septal areaipsiOSA3
Lateral septal nucleusipsiLS3
Lateral cervical nucleusipsiLatC1
Spinal cord lamina 1ipsiMESL10
Spinal cord layer 3 C1ipsiSCL3C11
Spinal cord layer 4 C1ipsiSCL4C11
Superficial dorsal horn C1ipsiSDHC11
Spinal cord layer 1 C1ipsiSCL1C11
Spinal cord layer 2 C1ipsiSCL2C11
Spinal cord layer 3 C2ipsiSCL3C23
Spinal cord layer 4 C2ipsiSCL4C23
Spinal cord layer 1 C2ipsiSCL1C23
Spinal cord layer 2 C2ipsiSCL2C23
Spinal cord layer 1 C3ipsiSCL1C31
Spinal cord layer 1 C4ipsiSCL1C41
Spinal cord layer 1 C5ipsiSCL1C51
Spinal cord layer 5 C6ipsiSCL5C60
Spinal cord layer 6 C6ipsiSCL6C60
Spinal cord layer 1 C6ipsiSCL1C61
Spinal cord layer 7 C6ipsiSCL7C60
Spinal cord layer 8 C6ipsiSCL8C60
Spinal cord layer 5 C7ipsiSCL5C70
Spinal cord layer 6 C7ipsiSCL6C70
Spinal cord layer 1 C7ipsiSCL1C71
Spinal cord layer 7 C7ipsiSCL7C70
Spinal cord layer 8 C7ipsiSCL8C70
Spinal cord layer 5 C8ipsiSCL5C80
Spinal cord layer 6 C8ipsiSCL6C80
Spinal cord layer 1 C8ipsiSCL1C81
Spinal cord layer 7 C8ipsiSCL7C80
Spinal cord layer 8 C8ipsiSCL8C80
Spinal cord layer 5 T1ipsiSCL5T10
Spinal cord layer 6 T1ipsiSCL6T10
Spinal cord layer 1 T1ipsiSCL1T11
Spinal cord layer 7 T1ipsiSCL7T10
Spinal cord layer 8 T1ipsiSCL8T10
Spinal cord layer 1 T2ipsiSCL1T21
Spinal cord layer 1 T3ipsiSCL1T31
Spinal cord layer 1 T4ipsiSCL1T41
Spinal cord layer 1 T5ipsiSCL1T51
Spinal cord layer 1 T6ipsiSCL1T61
Spinal cord layer 1 T7ipsiSCL1T71
Spinal cord layer 1 T8ipsiSCL1T81
Spinal cord layer 1 T9ipsiSCL1T91
Spinal cord layer 1 T10ipsiSCL1T101
Spinal cord layer 1 T11ipsiSCL1T111
Spinal cord layer 1 T12ipsiSCL1T121
Spinal cord layer 1 T13ipsiSCL1T131
Dorsal horn L1ipsiDHL10.5
Spinal cord layer 1 L1ipsiSCL1L11
Dorsal horn L2ipsiDHL20.5
Spinal cord layer 1 L2ipsiSCL1L21
Dorsal horn L3ipsiDHL30.5
Spinal cord layer 1 L3ipsiSCL1L31
Dorsal horn L4ipsiDHL40.5
Spinal cord layer 1 L4ipsiSCL1L41
Dorsal horn L5ipsiDHL50.5
Spinal cord layer 1 L5ipsiSCL1L51
Intermediolateral cell column L6ipsiIMLL61
Lumbar dorsal commissural nucleus L6ipsiLDComL61
Dorsal horn L6ipsiDHL60.5
Spinal cord layer 3 L6ipsiSCL3L61
Spinal cord layer 1 L6ipsiSCL1L61
Spinal cord layer 2 L6ipsiSCL2L61
Intermediolateral cell column S1ipsiIMLS11
Sacral dorsal commissural nucleus S1ipsiSDComS11
Spinal cord layer 3 S1ipsiSCL3S11
Spinal cord layer 1 S1ipsiSCL1S11
Spinal cord layer 2 S1ipsiSCL2S11
Intermediolateral cell column S2ipsiIMLS21
Sacral dorsal commissural nucleus S2ipsiSDComS21
Spinal cord layer 3 S2ipsiSCL3S21
Spinal cord layer 1 S2ipsiSCL1S21
Spinal cord layer 2 S2ipsiSCL2S21
Spinal cord layer 1 S3ipsiSCL1S31
Spinal cord layer 1 S4ipsiSCL1S41
TongueipsiOrgOCT-10
Stomach wallipsiOrgsStomWS-0.5
Anterior digastricus muscleipsiMuscADig-10
Posterior digastricus muscleipsiMuscPDig-10
Genioglossus muscleipsiMuscGenioG-10
Geniohyoid muscleipsiMuscGenio-10
Musculus masseteripsiMuscMass-10
Temporal muscleipsiMuscT-10
Pterygoid muscleipsiMuscPterygo-10
Mylohyoid muscleipsiMuscMyhy-10
Styloglossus muscle systemipsiMuscStyG-10
Buccinator muscleipsiMuscBucc-10
PlatysmaipsiMuscPla-10
Zygomatic muscleipsiMuscZygo-10
Hyoglossus muscleipsiMuscHyo-10
LungipsiOrgsLung-10
Trachea sideipsiOrgsTras3

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications