University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Spinal cord layers T12 left


Abbreviation
SCLT12
Color       
Superior regionsThoracal segment 12

SynonymsAbbr.Language
Spinal cord layers T12SCLT12Eng
Spinal gray matter of segment T12SCLT12Eng

SubregionsSide
Area X T12left
Dorsal horn T12left
Ventral horn T12left

Output to

NameSideAbbr.WeightDetails
CerebellumipsiCERE2
Lateral parabrachial nucleus lateral partipsiLPBL0.5
Ventral part of spinal trigeminal nucleus oral partipsiSp5OV-0.5
Nucleus ZipsiZ2
Dorsal thalamusipsiDOR1
Posterior thalamic nuclear groupipsiPo2
Dorsal ventrobasal complexipsiDVB2
Ventrobasal complex medial partipsiVBM2
Ventrobasal complex rostral partipsiVBR2
Lateral posterior thalamic nucleusipsiLP2
Spinal nucleus of the bulbocavernosus lumbal segment 5ipsiBCL51
Spinal nucleus of the bulbocavernosus lumbal segment 6ipsiBCL61
Lateral parabrachial nucleus lateral partcontraLPBL1
Ventral part of spinal trigeminal nucleus oral partcontraSp5OV-0.5
Dorsal thalamuscontraDOR2
Bulbocavernosus muscleipsiMuscBCV-10

Input from

NameSideAbbr.WeightDetails
Red nucleusipsiR-0.5
Dorsolateral pontine tegmentumipsiDLPT-0.5
Peduncularpontine nucleusipsiPPN-0.5
Laterodorsal tegmental nucleusipsiLDTg3
Sublaterodorsal tegmental nucleusipsiSLD-0.5
Dorsal tegmental nucleusipsiDTg1
Pedunculopontine tegmental nucleusipsiPPTg2
A5 noradrenaline cellsipsiA52
Locus coeruleus caudal part ventral partipsiLCcV1
Prepositus nucleusipsiPr2
Medial reticular formationipsiRFm-0.5
Midline reticular formationipsiMiRF1
Peribrachial regionipsiPBR-0.5
Gigantocellular reticular nucleusipsiGi2
Lateral reticular nucleusipsiLRt-0.5
Medullary reticular nucleus ventral partipsiMdV2
Ambiguus nucleusipsiAmb3
Motor trigeminal nucleusipsiMo53
Vestibular nucleiipsiVnc2
Medial vestibular nucleusipsiMVe2
Raphe nucleiipsiRAN-0.5
Raphe magnus nucleusipsiRMg2
Raphe obscurus nucleusipsiROb2
Raphe pallidus nucleusipsiRPa2
Rostral ventrolateral medullaipsiRVLM1
Lateral paragigantocellular nucleusipsiLPGi2
Lateral hypothalamic areaipsiLH-0.5
Ventromedial hypothalamic nucleus ventral partipsiVMHV1
Arcuate nucleusipsiArc1
Paraventricular hypothalamic nucleusipsiPa2
Paraventricular nucleus ventromedial parvocellular partipsiPaVMp2.5
Paraventricular nucleus dorsal partipsiPaDo2.5
Retrochiasmatic areaipsiRCh1
Zona incertaipsiZI2
Nucleus dorsalis of ClarkeipsiDHMESdc1
Lateral spinal nucleusipsiMESLn1
Area X L1ipsiSCL10L12
Spinal cord layer 5 L1ipsiSCL5L13
Spinal cord layer 3 L1ipsiSCL3L11
Spinal cord layer 4 L1ipsiSCL4L12
Spinal cord layer 1 L1ipsiSCL1L12
Spinal cord layer 2 L1ipsiSCL2L12
Spinal cord layer 7 L1ipsiSCL7L13
Spinal cord layer 8 L1ipsiSCL8L12
Red nucleus rostral partcontraRnRo3
Lateral hypothalamic areacontraLH-0.5
Ventromedial hypothalamic nucleus ventral partcontraVMHV0.5
Retrochiasmatic areacontraRCh0.5
Zona incertacontraZI-0.5
Area X L1contraSCL10L1-0.5
Spinal cord layer 5 L1contraSCL5L1-0.5
Spinal cord layer 7 L1contraSCL7L1-0.5
Spinal cord layer 8 L1contraSCL8L1-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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