University of Rostock

Department of Anatomy

Neuroscience Group

  Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Prepositus nucleus left


Abbreviation
Pr
Color       
Superior regionsPons

SynonymsAbbr.Language
Nucleus prepositus nervi hypoglossi  
Nucleus prepositi hypoglossi  
Nucleus prepositus hypoglossiPRPEng
Nucleus prepositusPRPEng
Prepositus hypoglossiPHEng
Nucleus prepositus hypoglossiPrHEng
Nucleus prepositus hypoglossiPhLat
Prepositus nucleusPrEng
Prepositus hypoglossal region Eng
Nucleus prepositus hypoglossiPHEng
Nucleus prepositus hypoglossiPrHEng
Area dorsal to the genu of the facial nerve and the giant cellular reticular nucleus  
Praepositus hypoglossi nucleus Eng
Prepositus hypoglossal nucleusPrHEng
Praepositus hypoglossi Eng

SubregionsSide
Dorsolateral part of the prepositus hypoglossal nucleusleft
Medial perifascicular aspect of the prepositus nucleusleft
Perifascicular region of the prepositus nucleusleft
Prepositus nucleus magnocellular partleft
Suprafascicular nucleus prepositus hypoglossi arealeft
Ventromedial part of the prepositus nucleusleft
Caudal subregion of prepositus nucleusleft
Rostral subregion of the prepositus nucleusleft
Retrofacial prepositus nucleusleft
Dorsomedial medulla region of the prepositus nucleusleft
Medial prepositus nucleusleft

Output to

NameSideAbbr.WeightDetails
Central grayipsiCG2
Medial longitudinal fasciculusipsimlf3
Nuclei of the lateral lemniscusipsiNLL1
Nucleus of DarkschewitschipsiDk1
Oculomotor systemipsiOCS-0.5
Oculomotor nucleusipsi32
Medial accessory oculomotor nucleusipsiMA30.5
Rostral interstitial nucleus of medial longitudinal fasciculusipsiRI1
Lateral periaqueductal grayipsiLPAG-0.5
Prerubral fieldipsiPR2
Superior colliculusipsiSC-0.5
Superior colliculus superficial layersipsiSCs-0.5
Superior colliculus intermediate and deep layersipsiSCidLa-0.5
Central tegmental field dorsal partipsiTGACd2
Midbrain extrapyramidal areaipsiMEA0.5
Subpeduncular tegmental nucleusipsiSPTg1
Ventral tegmental area A10ipsiVTA-0.5
Lateral tegmental nucleusipsiLTN-0.5
Laterodorsal tegmental nucleusipsiLDTg2
Ventral tegmental nucleusipsiVTg3
Dorsal tegmental nucleusipsiDTg2
Dorsal tegmental nucleus central partipsiDTgC-0.5
Dorsal tegmental nucleus ventromedial partipsiDTgVM-0.5
Pedunculopontine tegmental nucleusipsiPPTg2
Edinger Westphal nucleusipsiEW1
CerebellumipsiCERE-1
Cerebellar hemisphereipsiCEREBH1
Lateral part of the dorsal paraflocculusipsiDPFlL-0.5
Medial dorsal paraflocculusipsiDPFlM-0.5
Centromedial dorsal paraflocculusipsiDPFlCM-0.5
Centrolateral dorsal paraflocculusipsiDPFlCL-0.5
Rostromedial dorsal paraflocculusipsiDPFlRM0
Rostrocentral dorsal paraflocculusipsiDPFlRC-0.5
Rostrolateral dorsal paraflocculusipsiDPFlRL0
Caudolateral dorsal paraflocculusipsiDPFlCaL0
Paraflocculus ventral partipsiPFlv2
Lateral part of the ventral paraflocculusipsiPFlvL-0.5
Medial ventral paraflocculusipsiPFlvM-0.5
Central ventral paraflocculusipsiPFlvCe-0.5
Rostrolateral paraflocculus ventral partipsiPFlvRL-0.5
Posterior lobe of the cerebellumipsiCERCPL3
Simple lobuleipsiSim0.5
Anterior lobeipsiAnL3
Cerebellar lobule 4ipsiCERL41
Cerebellar lobule 5ipsiCERL51
Cerebellar lobule 7ipsiCERL71
Cerebellar lobule 8ipsiCERL81
Cerebellar lobule 9ipsiCERL93
Cerebellar lobule 10ipsiCERL103
Cerebellar lobule 10 medial partipsiCERL10Me2
Intermediate part of nodulusipsiCERL10im1
Cerebellar lobule 6aipsiCERL6a1
Cerebellar lobule 6bipsiCERL6b1
Cerebellar lobule 6cipsiCERL6c1
Posterior lobe vermisipsiPLVERM2
Deep cerebellar nucleiipsiDNC2
FlocculusipsiFl4
Medial part of the flocculusipsiFlM0
Rostrocentral flocculusipsiFlRC-0.5
Ventrolateral flocculusipsiFlVL-0.5
Rostromedial flocculusipsiFlRM-0.5
Rostrodorsal flocculusipsiFlRD0
Dorsolateral flocculusipsiFlDL-0.5
Rostroventral flocculusipsiFlRV0
Caudolateral flocculusipsiFlCaL-0.5
Dorsocentral flocculusipsiFlDC-0.5
Caudodorsomedial flocculusipsiFlCDM-0.5
Rostroventromedial flocculusipsiFlRVM-0.5
Rostrodorsomedial flocculusipsiFlRDM-0.5
Barringtons nucleusipsiBar0.5
Intermediate interstitial nucleus of the medial longitudinal fasciculusipsiII1
Locus coeruleusipsiLC3
Locus coeruleus caudal partipsiLCca1
Locus coeruleus coreipsiLCco-0.5
Locus coeruleus rostral partipsiLCRo0
Pericoerulear regionipsiPCR-0.5
Dorsolateral aspect of the pericoerulear regionipsiPCRDL-0.5
Rostrolateral pericoerulear regionipsiPCRrL1
Nucleus incertus pars dissipataipsiNId1
Pontine tegmental fieldipsiPTF1
Prepositus nucleusipsiPr4
Reticular systemipsiRF-1
Intermediate reticular nucleusipsiIRt2
Mesencephalic reticular formationipsiMRF1
Deep mesencephalic nucleusipsiDpMe1
Pontine reticular nucleusipsiPRN3
Pontine reticular nucleus oral partipsiPnO2
Ventrolateral pontine reticular formationipsivlPRF0
Pontine reticular nucleus caudal partipsiPNC3
Parabrachial nucleusipsiPB1
Lateral parabrachial nucleusipsiLPB1
Gigantocellular reticular nucleusipsiGi1
Supragenual nucleusipsiSGe-3
MyelencephalonipsiMYC3
Paraabducens nucleusipsiPa61
Facial nucleusipsi72
Mesencephalic trigeminal nucleusipsiMe5-0.5
Lateral part of the motor trigeminal nucleusipsiLMo54
Motor trigeminal nucleus dorsolateral partipsiMo5DL2
Motor trigeminal nucleus dorsomedial partipsiMo5DM2
Motor trigeminal nucleus ventral partipsiMo5V3
Motor trigeminal nucleus ventrolateral partipsiMo5vL2
Motor trigeminal nucleus ventromedial partipsiMo5VM3
Dorsal subdivision of the motor trigeminal nucleusipsiMo5D3
Motor trigeminal nucleus medial partipsiMo5m4
Principal sensory trigeminal nucleusipsiPr50
Principal sensory trigeminal nucleus caudal partipsiPr5ca0
Principal sensory trigeminal nucleus interpolar partipsiPr5ip0
Principal sensory trigeminal nucleus rostral partipsiPr5ro0
Spinal trigeminal nucleusipsiSp5nc2
Trigeminal subnucleus caudalisipsi5SSC-0.5
Trochlear nucleusipsi43
Spinal vestibular nucleusipsiSpVe2
Spinal vestibular nucleus rostral partipsiSpVeR1
Vestibular nuclei ventromedial partipsiVncVM3
Superior vestibular nucleusipsiSuVe2
Medial vestibular nucleusipsiMVe3
Medial vestibular nucleus intermediate partipsiMVei1
Medial vestibular nucleus magnocellular partipsiMVeMC3
Medial vestibular nucleus parvicellular partipsiMVePC3
Medial vestibular nucleus rostral partipsiMVeR1
Lateral vestibular nucleusipsiLVe1
Inferior vestibular nucleus intermediate partipsiIVNi1
Nucleus of the solitary tractipsiSol-0.5
Nucleus of the solitary tract commissural partipsiSolC-0.5
Dorsal motor nucleus of vagusipsi100
Raphe nucleiipsiRAN-0.5
Dorsal raphe nucleusipsiDR2
Dorsal raphe nucleus dorsal partipsiDRD0.5
Dorsal raphe nucleus dorsomedial subdivisionipsiDRdm2
Dorsal raphe nucleus dorsomedian partipsiDRdmm2
Dorsal raphe nucleus lateral wingipsiDRlw1
Dorsal raphe nucleus medial partipsiDRNM2
Dorsal raphe nucleus median partipsiDRM1
Dorsal raphe nucleus caudal midlineipsiDRcmip1
Dorsal raphe nucleus rostral partipsiDRr0.5
Dorsal raphe nucleus ventral partipsiDRV0.5
Dorsal raphe nucleus ventrolateral partipsiDRVL4
Dorsal raphe nucleus ventromedial subdivisionipsiDRvme1
Lateral part of the ventromedial dorsal raphe nucleusipsiDRvmeL4
Median raphe nucleusipsiMnR2
Nucleus of RolleripsiRo0
Olivary nucleusipsiON0
Inferior oliveipsiIO3
Inferior olive cap of Kooy of the medial nucleusipsiIOK-0.5
Caudal part of the dorsal cap of KooyipsiCDC3
Rostral dorsal cap of Kooy of the medial nucleusipsiIOKRD2
Inferior olive dorsal nucleusipsiIOD2
Inferior olive medial nucleus medial partipsiIOMm1
Inferior olive beta subnucleusipsiIOBe-0.5
Rostrocaudal level of the inferior olive ventrolateral protrusionipsiIOVLRC1
Inferior olive principal nucleusipsiIOPr2
Dorsal paragigantocellular nucleusipsiDPGi1
Lateral paragigantocellular nucleus retrofacial partipsiLPGirf1
Paragigantocellular reticular nucleus caudal lateral partipsiPGicL0
Paragigantocellular reticular nucleus caudal medial partipsiPGicM1
Paragigantocellular reticular nucleus rostral lateral partipsiPGiRL0
Paragigantocellular reticular nucleus rostral medial partipsiPGiRM0
Retrofacial paragigantocellular reticular nucleusipsiRPGi1
Juxtafacial paragigantocellular reticular nucleusipsiJPGi2
Median eminence middle portion subependymal layeripsiMEmise1
Nucleus of the horizontal limb of the diagonal bandipsiHDB1
Basal nucleus MeynertipsiB-3
Magnocellular preoptic nucleusipsiMCPO1
HypothalamusipsiHYPO1
Arcuate nucleus ventromedial partipsiArcVM2
Nucleus paraventricularis [Periventricular zone anterior region]ipsiPaPAR2
Paraventricular hypothalamic nucleusipsiPa2
Supraoptic nucleus [Supraoptic region]ipsiSO0.5
Lateral mammillary nucleusipsiLM3
A8 dopamine cells retrorubral groupipsiRRF1
Anteroventral thalamic nucleusipsiAV0
Central medial thalamic nucleusipsiCM-0.5
Centrolateral thalamic nucleusipsiCL2
Paracentral thalamic nucleus caudal partipsiPC-c0
Paracentral thalamic nucleus rostral partipsiPC-r0
Parafascicular thalamic nucleus lateral partipsiPFL2
Parafascicular thalamic nucleus medial partipsiPFM1
Rhomboid thalamic nucleusipsiRh1
Mediodorsal thalamic nucleusipsiMD2
Intermediodorsal thalamic nucleusipsiIMD0
Submedius thalamic nucleusipsiSub0
Paratenial thalamic nucleusipsiPT0
Paraventricular thalamic nucleus anterior partipsiPVA0
Paraventricular thalamic nucleus medial partipsiPVM0
Paraventricular thalamic nucleus posterior partipsiPVP0
Reuniens thalamic nucleusipsiRe0
Reunienes thalamic nucleus rostromedial divisionipsiRerm1
Subfornical organipsiSFO-0.5
Ventrolateral thalamic nucleusipsiVL2
Lateral ventroposteromedial thalamic nucleusipsiLVPM2
Ventral posterior thalamic complex medial partipsiVPTm2
Ventral posterior thalamic nucleus parvicellular partipsiVPPC0
Ventrobasal complexipsiVB2
Ventromedial thalamic nucleusipsiVM2
Ventromedial thalamic nucleus caudal partipsiVMc1
Laterodorsal thalamic nucleusipsiLD2
Oval paracentral thalamic nucleusipsiOPC0
Zona incertaipsiZI1
Nucleus of the optic tractipsiOT0.5
Pretectal regionipsiPRT-0.5
Anterior pretectal nucleusipsiAPT2
Medial forebrain bundleipsimfb-2
Vestibular cisternipsivesist-0.5
Globus pallidusipsiGP-3
Ventral pallidumipsiVP1
Cerebral cortexipsiCEC1
Nucleus of the posterior commissureipsiPCom0
Olfactory tubercleipsiTuO0
Ventrolateral funiculusipsivLF0
Cervical segment 1ipsiCS10.5
Intermediomedial cell column C4ipsiIMMC4-0.5
Intermediomedial cell column C5ipsiIMMC5-0.5
Intermediolateral cell column T1ipsiIMLT1-0.5
Spinal cord layers T1ipsiSCLT12
Intermediolateral cell column T2ipsiIMLT2-0.5
Spinal cord layers T2ipsiSCLT22
Intermediolateral cell column T3ipsiIMLT3-0.5
Spinal cord layers T3ipsiSCLT32
Intermediolateral cell column T4ipsiIMLT4-0.5
Spinal cord layers T4ipsiSCLT42
Spinal cord layers T5ipsiSCLT52
Spinal cord layers T6ipsiSCLT62
Spinal cord layers T7ipsiSCLT72
Spinal cord layers T8ipsiSCLT82
Spinal cord layers T9ipsiSCLT92
Thoracal segment 10ipsiT10-0.5
Spinal cord layers T10ipsiSCLT102
Spinal cord layers T11ipsiSCLT112
Spinal cord layers T12ipsiSCLT122
Spinal cord layers T13ipsiSCLT132
Lumbosacral spinal cordipsiLSSC-0.5
Intermediomedial cell column L1ipsiIMML1-0.5
Spinal cord layers L1ipsiSCLL12
Intermediomedial cell column L2ipsiIMML2-0.5
Spinal cord layers L2ipsiSCLL22
Intermediomedial cell column L3ipsiIMML3-0.5
Spinal cord layers L3ipsiSCLL32
Intermediomedial cell column L4ipsiIMML4-0.5
Spinal cord layers L4ipsiSCLL42
Intermediomedial cell column L5ipsiIMML5-0.5
Spinal cord layers L5ipsiSCLL52
Intermediomedial cell column L6ipsiIMML6-0.5
Spinal cord layers L6ipsiSCLL62
Central graycontraCG1
Medial longitudinal fasciculuscontramlf3
Nuclei of the lateral lemniscuscontraNLL1.5
Nucleus of DarkschewitschcontraDk1
Oculomotor nucleuscontra31
Medial accessory oculomotor nucleuscontraMA30
Rostral interstitial nucleus of medial longitudinal fasciculuscontraRI0
Periaqueductal gray lateroventral partcontraPAGLV1
Prerubral fieldcontraPR0
Superior colliculuscontraSC1
Central tegmental field dorsal partcontraTGACd3
Midbrain extrapyramidal areacontraMEA0.5
Subpeduncular tegmental nucleuscontraSPTg0.5
Ventral tegmental area A10contraVTA-0.5
Lateral tegmental areacontraLTGA-0.5
Lateral tegmental nucleuscontraLTN-0.5
Laterodorsal tegmental nucleuscontraLDTg3
Ventral tegmental nucleuscontraVTg3
Dorsal tegmental nucleuscontraDTg3
Pedunculopontine tegmental nucleuscontraPPTg3
Edinger Westphal nucleuscontraEW0.5
Lateral part of the dorsal paraflocculuscontraDPFlL-0.5
Medial dorsal paraflocculuscontraDPFlM-0.5
Centromedial dorsal paraflocculuscontraDPFlCM-0.5
Centrolateral dorsal paraflocculuscontraDPFlCL-0.5
Rostromedial dorsal paraflocculuscontraDPFlRM0
Rostrocentral dorsal paraflocculuscontraDPFlRC-0.5
Rostrolateral dorsal paraflocculuscontraDPFlRL0
Caudolateral dorsal paraflocculuscontraDPFlCaL0
Paraflocculus ventral partcontraPFlv2
Lateral part of the ventral paraflocculuscontraPFlvL-0.5
Medial ventral paraflocculuscontraPFlvM-0.5
Central ventral paraflocculuscontraPFlvCe-0.5
Rostrolateral paraflocculus ventral partcontraPFlvRL-0.5
Simple lobulecontraSim0.5
Anterior lobecontraAnL-1
Cerebellar lobule 7contraCERL71
Cerebellar lobule 8contraCERL81
Cerebellar lobule 9contraCERL91
Cerebellar lobule 10contraCERL10-0.5
Cerebellar lobule 10 medial partcontraCERL10Me2
Intermediate part of noduluscontraCERL10im1
Cerebellar lobule 6acontraCERL6a1
Cerebellar lobule 6bcontraCERL6b1
Cerebellar lobule 6ccontraCERL6c1
FlocculuscontraFl4
Medial part of the flocculuscontraFlM0
Rostrocentral flocculuscontraFlRC-0.5
Ventrolateral flocculuscontraFlVL-0.5
Rostromedial flocculuscontraFlRM-0.5
Rostrodorsal flocculuscontraFlRD0
Dorsolateral flocculuscontraFlDL-0.5
Rostroventral flocculuscontraFlRV-0.5
Caudolateral flocculuscontraFlCaL-0.5
Dorsocentral flocculuscontraFlDC-0.5
Caudodorsomedial flocculuscontraFlCDM-0.5
Rostroventromedial flocculuscontraFlRVM-0.5
Rostrodorsomedial flocculuscontraFlRDM-0.5
Intermediate interstitial nucleus of the medial longitudinal fasciculuscontraII0
Locus coeruleuscontraLC3
Pontine tegmental fieldcontraPTF1
Prepositus nucleuscontraPr3
Intermediate reticular nucleuscontraIRt2
Deep mesencephalic nucleuscontraDpMe1
Pontine reticular nucleuscontraPRN1
Pontine reticular nucleus oral partcontraPnO1
Ventrolateral pontine reticular formationcontravlPRF0
Pontine reticular nucleus caudal partcontraPNC1
Parabrachial nucleuscontraPB1
Lateral parabrachial nucleuscontraLPB2
Gigantocellular reticular nucleuscontraGi1
Supragenual nucleuscontraSGe-3
Paraabducens nucleuscontraPa61
Facial nucleuscontra71
Mesencephalic trigeminal nucleuscontraMe5-0.5
Lateral part of the motor trigeminal nucleuscontraLMo54
Motor trigeminal nucleus dorsolateral partcontraMo5DL2
Motor trigeminal nucleus dorsomedial partcontraMo5DM2
Motor trigeminal nucleus ventral partcontraMo5V3
Motor trigeminal nucleus ventrolateral partcontraMo5vL2
Motor trigeminal nucleus ventromedial partcontraMo5VM3
Dorsal subdivision of the motor trigeminal nucleuscontraMo5D2
Motor trigeminal nucleus medial partcontraMo5m3
Principal sensory trigeminal nucleuscontraPr50
Principal sensory trigeminal nucleus caudal partcontraPr5ca0
Principal sensory trigeminal nucleus interpolar partcontraPr5ip0
Principal sensory trigeminal nucleus rostral partcontraPr5ro0
Spinal trigeminal nucleuscontraSp5nc1.5
Spinal vestibular nucleuscontraSpVe1.5
Spinal vestibular nucleus rostral partcontraSpVeR2
Vestibular nuclei ventromedial partcontraVncVM3
Superior vestibular nucleuscontraSuVe2
Medial vestibular nucleuscontraMVe3
Medial vestibular nucleus intermediate partcontraMVei2
Medial vestibular nucleus magnocellular partcontraMVeMC2
Medial vestibular nucleus parvicellular partcontraMVePC3
Medial vestibular nucleus rostral partcontraMVeR2
Lateral vestibular nucleuscontraLVe1.5
Inferior vestibular nucleus intermediate partcontraIVNi2
Nucleus of the solitary tract commissural partcontraSolC-0.5
Raphe nucleicontraRAN-0.5
Dorsal raphe nucleuscontraDR2
Dorsal raphe nucleus lateral wingcontraDRlw1
Median raphe nucleuscontraMnR0
Nucleus of RollercontraRo2
Inferior olivecontraIO3
Inferior olive cap of Kooy of the medial nucleuscontraIOK-0.5
Caudal part of the dorsal cap of KooycontraCDC3
Rostral dorsal cap of Kooy of the medial nucleuscontraIOKRD2
Inferior olive caudal partcontraIOCa-0.5
Inferior olive medial nucleuscontraIOM-0.5
Inferior olive beta subnucleuscontraIOBe-0.5
Inferior olive ventrolateral protrusioncontraIOVL1
Dorsal paragigantocellular nucleuscontraDPGi1
HypothalamuscontraHYPO1
Lateral mammillary nucleuscontraLM2
A8 dopamine cells retrorubral groupcontraRRF1
Perifornical nucleuscontraPeF1.5
Centrolateral thalamic nucleuscontraCL3
Mediodorsal thalamic nucleuscontraMD3
Ventrolateral thalamic nucleuscontraVL3
Lateral ventroposteromedial thalamic nucleuscontraLVPM3
Ventral posterior thalamic complex medial partcontraVPTm3
Ventrobasal complexcontraVB3
Ventromedial thalamic nucleuscontraVM3
Laterodorsal thalamic nucleuscontraLD3
Zona incertacontraZI1
Nucleus of the optic tractcontraOT0
Pretectal regioncontraPRT2
Anterior pretectal nucleuscontraAPT2
Medial forebrain bundlecontramfb-2
Vestibular cisterncontravesist-0.5
Cerebral cortexcontraCEC1
Nucleus of the posterior commissurecontraPCom0.5
Ventrolateral funiculuscontravLF0
Cervical segment 1contraCS10.5
Spinal cord layers C2contraSCLC21
Intermediomedial cell column C4contraIMMC4-0.5
Intermediomedial cell column C5contraIMMC5-0.5
Spinal cord layers T10contraSCLT101
MyocardiumipsiOrgsCorMyo-0.5
MyocardiumcontraOrgsCorMyo-0.5
Medial rectus muscleipsiMuscEEyeMR-0.5
Lateral rectus musclecontraMuscEEyeLR-0.5

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG2
Nucleus of DarkschewitschipsiDk1
Oculomotor nucleusipsi30.5
Dorsal terminal nucleus of the accessory optic tractipsiDT-0.5
Medial accessory oculomotor nucleusipsiMA30.5
Rostral interstitial nucleus of medial longitudinal fasciculusipsiRI1
Periaqueductal grayipsiPAG0.5
Dorsal periaqueductal grayipsiDPAG3
Dorsal periaqueductal gray caudal partipsiDPAGC0.5
Dorsolateral periaqueductal grayipsiDLPAG3
Dorsolateral periaqueductal gray caudal partipsiPAGdlc0
Dorsolateral periaqueductal gray rostral partipsiPAGdlr0
Caudal part of the medial periaqueductal grayipsiPAGmc3
Ventral periaqueductal grayipsiVPAG1
Ventrolateral periaqueductal grayipsiVLPAG3
Ventrolateral periaqueductal gray caudal partipsiPAGvlc1
Ventrolateral periaqueductal gray rostral partipsiPAGvlr0.5
Ventromedial periaqueductal grayipsiVMPAG-0.5
Prerubral fieldipsiPR2
Superior colliculusipsiSC0
Subpeduncular tegmental nucleusipsiSPTg1
Laterodorsal tegmental nucleusipsiLDTg1
Dorsal tegmental nucleusipsiDTg1
Dorsal tegmental nucleus lateral partipsiDLTN1
Pedunculopontine tegmental nucleusipsiPPTg1
Edinger Westphal nucleusipsiEW1
Rostral part of the ventral paraflocculusipsiPFlvr0
Dorsolateral humpipsiCERcndl0
Anterior interposed nucleusipsiAIN0
Posterior interposed nucleusipsiCERpin0
Lateral cerebellar nucleusipsiCERL0
Medial cerebellar nucleusipsiMed1
Medial cerebellar nucleus caudalmedial partipsiMedCM1
Caudal part of the middle part of the fastigial nucleusipsiMedmC0
Lateral part of the middle part of the fastigial nucleusipsiMedmL0
Rostral part of the middle part of the fastigial nucleusipsiMedmR0
Fastigial pressure areaipsiFastPress-0.5
Dorsal flocculusipsiDFl-0.5
Rostral part of the flocculusipsiFlR0.5
Rostrolateral part of the flocculusipsiFlRL0.5
Ventral flocculusipsiVFl-0.5
Barringtons nucleusipsiBar2
Intermediate interstitial nucleus of the medial longitudinal fasciculusipsiII1
Locus coeruleusipsiLC1
Nucleus incertus pars compactaipsiNIc3
Nucleus incertus pars dissipataipsiNId1
Pontine grayipsiPG1
Reticulotegmental nucleusipsiRETn1
Prepositus nucleusipsiPr4
Deep mesencephalic nucleusipsiDpMe1
Pontine reticular nucleusipsiPRN3
Pontine reticular nucleus central partipsiNRTPc1
Pontine reticular nucleus oral partipsiPnO3
Ventrolateral pontine reticular formationipsivlPRF1
Pontine reticular nucleus caudal partipsiPNC3
Pontine reticular nucleus pericentral partipsiNRTPp1
Parabrachial nucleus medialipsiPBnMe2
Gigantocellular reticular nucleusipsiGi3
Parvicellular reticular nucleus rostral portionipsipRNr-0.5
Posterior part of the parvicellular reticular nucleus rostral portionipsiPpRNr-0.5
Subcoeruleus nucleus dorsal partipsiSubCD1.5
Paraabducens nucleusipsiPa61
Principal sensory trigeminal nucleusipsiPr52
Principal sensory trigeminal nucleus caudal partipsiPr5ca0
Principal sensory trigeminal nucleus interpolar partipsiPr5ip3
Principal sensory trigeminal nucleus rostral partipsiPr5ro3
Spinal trigeminal nucleusipsiSp5nc0.5
Dorsal part of spinal trigeminal nucleus oral partipsiSp5OD-0.5
Spinal vestibular nucleusipsiSpVe2
Vestibular nucleiipsiVnc2
Vestibular nuclei ventromedial partipsiVncVM3
Superior vestibular nucleusipsiSuVe1
Medial vestibular nucleusipsiMVe3
Medial vestibular nucleus caudal partipsiMVeP0
Medial vestibular nucleus parvicellular partipsiMVePC3
Lateral vestibular nucleusipsiLVe1
Nucleus of the solitary tractipsiSol2
Dorsal raphe nucleusipsiDR2
Dorsal raphe nucleus dorsomedial subdivisionipsiDRdm1
Dorsal raphe nucleus lateral partipsiDRLa0.5
Dorsal raphe nucleus rostral partipsiDRr2
Dorsal raphe nucleus ventrolateral partipsiDRVL1
Dorsal raphe nucleus ventromedial subdivisionipsiDRvme1
Dorsal raphe nucleus intrafascicular regionipsiDRiFa1
Median raphe nucleusipsiMnR0
Superior central raphe nucleusipsiCS2
Nucleus of RolleripsiRo0
Inferior oliveipsiIO0
Olivary pretectal nucleusipsiOPT2
Dorsal paragigantocellular nucleusipsiDPGi1
Rostral part of the ventromedial medulla oblongataipsiRMeObvm4
Median eminence middle portion subependymal layeripsiMEmise0
HypothalamusipsiHYPO1
Dorsomedial hypothalamic nucleusipsiDMHy0
Perifornical hypothalamic area [Preoptic anterior region]ipsiPFxPAR0.5
Lateral zoneipsiLHA1
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area dorsal partipsiLHd0.5
Lateral hypothalamic area perifornical partipsiPFx3
Lateral hypothalamic area ventral partipsiLHAvp0.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM3
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM3
Posterior hypothalamic areaipsiPHA1
Posterior hypothalamic nucleus caudal partipsiPHCa0
Posterior hypothalamic nucleus rostral partipsiPHRo0
Periventricular zoneipsiPVZ0
Arcuate nucleus ventromedial partipsiArcVM0
Medial part of the caudal perifornical areaipsiPeFCM0.5
Lateral part of the caudal perifornical areaipsiPeFCL0.5
Parafascicular thalamic nucleus ventral partipsiPFV-0.5
Lateral posterior thalamic nucleusipsiLP-1
Zona incertaipsiZI1
Nucleus of the optic tractipsiOT0.5
Dorsal part of the rostromedial nucleus of the optic tractipsiDRMOT-0.5
Pretectal regionipsiPRT-0.5
Anterior pretectal nucleusipsiAPT2
Posterior pretectal nucleusipsiPPT2
Accessory optic systemipsiAOS-3
Medial terminal nucleus of the accessory optic tractipsiMT-3
Cerebral cortexipsiCEC1
Whisker motor cortex A1ipsiWMCxA12
Medial agranular prefrontal cortexipsiAGm1.5
Nucleus of the posterior commissureipsiPCom0
Olfactory tubercleipsiTuO3
Central cervical nucleus C1ipsiCeCvC1-0.5
Central cervical nucleus C2ipsiCeCvC2-0.5
Dorsal root ganglion C2ipsiDRGC2-0.5
Central cervical nucleus C3ipsiCeCvC3-0.5
Dorsal root ganglion C3ipsiDRGC3-0.5
Central cervical nucleus C4ipsiCeCvC4-0.5
Dorsal root ganglion C4ipsiDRGC4-0.5
Dorsal root ganglion L2ipsiDRGL2-0.5
Central graycontraCG1
Nucleus of DarkschewitschcontraDk1
Oculomotor nucleuscontra31
Medial accessory oculomotor nucleuscontraMA30
Rostral interstitial nucleus of medial longitudinal fasciculuscontraRI0
Periaqueductal graycontraPAG0.5
Dorsal periaqueductal graycontraDPAG1
Dorsal periaqueductal gray caudal partcontraDPAGC0
Dorsolateral periaqueductal graycontraDLPAG1
Dorsolateral periaqueductal gray caudal partcontraPAGdlc0
Dorsolateral periaqueductal gray rostral partcontraPAGdlr0
Caudal part of the medial periaqueductal graycontraPAGmc1
Ventral periaqueductal graycontraVPAG0.5
Ventrolateral periaqueductal graycontraVLPAG1
Ventrolateral periaqueductal gray caudal partcontraPAGvlc0.5
Ventrolateral periaqueductal gray rostral partcontraPAGvlr0.5
Prerubral fieldcontraPR0
Superior colliculuscontraSC1
Subpeduncular tegmental nucleuscontraSPTg0.5
Dorsal tegmental nucleuscontraDTg1
Dorsal tegmental nucleus lateral partcontraDLTN0.5
Pedunculopontine tegmental nucleuscontraPPTg1
Edinger Westphal nucleuscontraEW0.5
Dorsolateral humpcontraCERcndl0.5
Dorsomedial crestcontraCERcndm1
Interposed cerebellar nucleicontraICN1
Anterior interposed nucleuscontraAIN0
Posterior interposed nucleuscontraCERpin0
Lateral cerebellar nucleuscontraCERL1
Lateral cerebellar nucleus parvicellular partcontraLatPC1
Medial cerebellar nucleuscontraMed1
Medial cerebellar nucleus caudalmedial partcontraMedCM1
Medial cerebellar nucleus centromedial partcontraCMMed0.5
Medial cerebellar nucleus middle subdivisioncontraMMCM0.5
Lateral part of the middle part of the fastigial nucleuscontraMedmL0
Dorsolateral protuberancecontraDLPr0.5
Intermediate interstitial nucleus of the medial longitudinal fasciculuscontraII0
Pontine graycontraPG1
Reticulotegmental nucleuscontraRETn1
Prepositus nucleuscontraPr3
Deep mesencephalic nucleuscontraDpMe1
Pontine reticular nucleuscontraPRN1
Pontine reticular nucleus central partcontraNRTPc1
Pontine reticular nucleus oral partcontraPnO3
Ventrolateral pontine reticular formationcontravlPRF1
Pontine reticular nucleus caudal partcontraPNC3
Pontine reticular nucleus pericentral partcontraNRTPp1
Gigantocellular reticular nucleuscontraGi3
Supragenual nucleuscontraSGe1
Paraabducens nucleuscontraPa61
Principal sensory trigeminal nucleuscontraPr52
Principal sensory trigeminal nucleus caudal partcontraPr5ca0
Principal sensory trigeminal nucleus interpolar partcontraPr5ip2
Principal sensory trigeminal nucleus rostral partcontraPr5ro2
Spinal trigeminal nucleuscontraSp5nc0.5
Spinal vestibular nucleuscontraSpVe2
Vestibular nuclei ventromedial partcontraVncVM3
Superior vestibular nucleuscontraSuVe2
Medial vestibular nucleuscontraMVe3
Medial vestibular nucleus parvicellular partcontraMVePC2
Lateral vestibular nucleuscontraLVe1
Nucleus of the solitary tractcontraSol1
Dorsal raphe nucleuscontraDR2
Dorsal raphe nucleus dorsomedial subdivisioncontraDRdm0.5
Dorsal raphe nucleus lateral partcontraDRLa0.5
Dorsal raphe nucleus ventrolateral partcontraDRVL0.5
Dorsal raphe nucleus ventromedial subdivisioncontraDRvme0.5
Nucleus of RollercontraRo2
Inferior olivecontraIO0.5
Olivary pretectal nucleuscontraOPT2
Dorsal paragigantocellular nucleuscontraDPGi3
HypothalamuscontraHYPO1
Dorsomedial hypothalamic nucleuscontraDMHy0
Perifornical hypothalamic area [Preoptic anterior region]contraPFxPAR-0.5
Lateral hypothalamic area dorsal partcontraLHd-0.5
Lateral hypothalamic area ventral partcontraLHAvp-0.5
Dorsomedial hypothalamic nucleus [Medial zone]contraDM0
Posterior hypothalamic nucleus caudal partcontraPHCa0
Posterior hypothalamic nucleus rostral partcontraPHRo0
Periventricular zonecontraPVZ0
Medial part of the caudal perifornical areacontraPeFCM-0.5
Lateral part of the caudal perifornical areacontraPeFCL-0.5
Zona incertacontraZI1
Nucleus of the optic tractcontraOT3
Pretectal regioncontraPRT3
Anterior pretectal nucleuscontraAPT2
Posterior pretectal nucleuscontraPPT2
Cerebral cortexcontraCEC1
Whisker motor cortex A1contraWMCxA11
Nucleus of the posterior commissurecontraPCom0.5
C1 C2 anastomosis suboccipital nerve dorsal spinal nerve C2ipsic1c2a-0.5
Sternomastoid nerveipsismn-0.5
TongueipsiOrgOCT-10
Anterior digastricus muscleipsiMuscADig-10
Posterior digastricus muscleipsiMuscPDig-10
Genioglossus muscleipsiMuscGenioG-10
Geniohyoid muscleipsiMuscGenio-10
Musculus masseteripsiMuscMass-10
Temporal muscleipsiMuscT-10
Pterygoid muscleipsiMuscPterygo-10
Mylohyoid muscleipsiMuscMyhy-10
Styloglossus muscle systemipsiMuscStyG-10
Buccinator muscleipsiMuscBucc-10
PlatysmaipsiMuscPla-10
Zygomatic muscleipsiMuscZygo-10
Hyoglossus muscleipsiMuscHyo-10
Trachea sideipsiOrgsTras2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications