University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Sacral segments left


Abbreviation
SSeg
Color       
Superior regionsLumbosacral spinal cord

SynonymsAbbr.Language
Sacral segmentsSSeg 
Sacral spinal cord Eng

SubregionsSide
Sacral segment 1left
Sacral segment 2left
Sacral segment 3left
Sacral segment 4left
Sacral segments layersleft
Sacral parasympathetic nucleusleft
Dorsal root ganglion S5left
Sacral segments intermediolateral partleft
Ventrolateral nucleus of sacral segmentsleft
Ventromedial nucleus of sacral segmentsleft
Sacral column of Clarkleft
Ventral funiculus neuronsleft
Sacral central pattern generator neuronsleft

Output to

NameSideAbbr.WeightDetails
Laterodorsal tegmental nucleusipsiLDTg3
Rostral part of the ventromedial medulla oblongataipsiRMeObvm1
Rostral part of the midline ventromedial medulla oblongataipsiRMeObvmi1
Zona incerta central partipsiZIce1
Zona incerta lateral partipsiZIL1
Rostral part of the ventromedial medulla oblongatacontraRMeObvm2
Rostral part of the midline ventromedial medulla oblongatacontraRMeObvmi1
Zona incerta lateral partcontraZIL2
Zona incerta central partcontraZIce2
Peroneus muscleipsiMuscPero-0.5
Femoral bone marrowipsiOrgSkFemM1
Femoral bone marrowcontraOrgSkFemM1

Input from

NameSideAbbr.WeightDetails
Red nucleus ventrolateral partipsiRveL-0.5
Mesopontine tegmental area caudal partipsiTGAmc2
Mesopontine tegmental area rostral partipsiTGAmr1
Peduncularpontine nucleusipsiPPN-0.5
Laterodorsal tegmental nucleusipsiLDTg1
Locus coeruleusipsiLC1
Pontine reticular nucleus oral partipsiPnO-0.5
Parabrachial nucleusipsiPB-0.5
Medullary reticular nucleusipsiMdD-0.5
Subcoeruleus nucleusipsiSubC1
Lateral vestibular nucleusipsiLVe1
Lateral preoptic areaipsiLPO0
Medial preoptic areaipsiMPA0
Lateral hypothalamic areaipsiLH1
Medial portion of the basal lateral hypothalamusipsiBLHme0.5
Anterior hypothalamic areaipsiAHA0.5
Dorsal hypothalamic areaipsiDA1
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM1
Posterior hypothalamic areaipsiPHA1
Ventromedial hypothalamic nucleusipsiVMH0
Arcuate nucleusipsiArc0
Paraventricular hypothalamic nucleusipsiPa2
Paraventricular hypothalamic nucleus rostral partipsiPaRo0
A8 dopamine cells retrorubral groupipsiRRF-0.5
Zona incertaipsiZI2
Bed nucleus of the stria terminalisipsiBST0
Central amygdaloid nucleusipsiCe0
Insular cortexipsiICX0
Sensory regionsipsiSR0
Paralemniscal nucleuscontraPL-0.5
Mesopontine tegmental area caudal partcontraTGAmc2
Mesopontine tegmental area rostral partcontraTGAmr0.5
Lateral preoptic areacontraLPO0
Medial preoptic areacontraMPA0
Lateral hypothalamic areacontraLH1
Medial portion of the basal lateral hypothalamuscontraBLHme0.5
Anterior hypothalamic areacontraAHA1
Dorsal hypothalamic areacontraDA1
Dorsomedial hypothalamic nucleus [Medial zone]contraDM1
Posterior hypothalamic areacontraPHA1
Ventromedial hypothalamic nucleuscontraVMH0
Arcuate nucleuscontraArc0
Paraventricular hypothalamic nucleuscontraPa3
Paraventricular hypothalamic nucleus rostral partcontraPaRo0
Zona incertacontraZI2
Bed nucleus of the stria terminaliscontraBST0
Central amygdaloid nucleuscontraCe0
Insular cortexcontraICX2
Sensory regionscontraSR0
Distal colonipsiOrgsColonDi-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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