University of Rostock

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Rat connectome



Spinal cord layer 9 S3 left


Abbreviation
SCL9S3
Color       
Superior regionsVentral horn S3

SynonymsAbbr.Language
Spinal cord layer 9 S3SCL9S3Eng

Output to

NameSideAbbr.WeightDetails
Dorsal periaqueductal grayipsiDPAG0.5
Lateral periaqueductal grayipsiLPAG1
Gigantocellular reticular nucleusipsiGi-0.5
Raphe pallidus nucleusipsiRPa1
Vasodepressor part of caudal midline medulla oblongataipsiCMeObmVd1.5
Lateral paragigantocellular nucleusipsiLPGi-0.5
Lateral group of the dorsal thalamusipsiLAT0
Medial thalamic zoneipsiMTZ0
Ventral horn C1ipsiVHC10
Ventral horn C2ipsiVHC20
Ventral horn C3ipsiVHC30
Dorsal periaqueductal graycontraDPAG1
Lateral periaqueductal graycontraLPAG1
Gigantocellular reticular nucleuscontraGi-0.5
Raphe pallidus nucleuscontraRPa1
Lateral paragigantocellular nucleuscontraLPGi-0.5
Lateral group of the dorsal thalamuscontraLAT0
Medial thalamic zonecontraMTZ0
Ventral horn C1contraVHC10.5
Ventral horn C2contraVHC20.5
Ventral horn C3contraVHC30.5
Ventromedial gray substance at the level of the lumbal segment 4contraL4vmg3
StomachipsiOrgsStomS-1
Sacrococcygeus dorsi lateralis muscleipsiMuscSDL-0.5
Tail muscleipsiMuscTail-0.5
Extensor caudalis medialis muscleipsiMuscExCaMe-0.5

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG1
Laterodorsal tegmental nucleusipsiLDTg1
Dorsal tegmental nucleus lateral partipsiDLTN2
A5 noradrenaline cellsipsiA52
Locus coeruleusipsiLC3
Caudal part of ventral locus coeruleusipsiLCveca3
Medial reticular formationipsiRFm-0.5
Ventrolateral reticular formationipsiVLRF-0.5
Pontine reticular nucleusipsiPRN3
Dorsolateral pontine reticular formationipsiPRNDL1
Pontine reticular nucleus oral partipsiPnO2
Pontine reticular nucleus oral part caudal partipsiPnOc2.5
Pontine reticular nucleus oral part dorsolateral partipsiPnODL2.5
Pontine reticular nucleus oral part lateral partipsiPnOL2.5
Pontine reticular nucleus caudal partipsiPNC-0.5
Pontine reticular nucleus caudal part ventrolateral partipsiPNCvL2.5
Cuneiforme nucleusipsiCnF2.5
Koelliker Fuse nucleusipsiKF2
Lateral parabrachial nucleusipsiLPB1
Parabrachial nucleus medialipsiPBnMe1
Gigantocellular reticular nucleusipsiGi3
Gigantocellular reticular nucleus dorsal partipsiGidp3
Gigantocellular reticular nucleus medial partipsiGiM-0.5
Gigantocellular reticular nucleus rostral partipsiGiRo-0.5
Lateral reticular nucleusipsiLRt1
Lateral reticular nucleus rostral partipsiLRtr2
Medial subnucleus reticularis ventralis caudal partipsiMSRVc1
Medial subnucleus reticularis ventralis rostral partipsiMSRVr1
Medullary reticular nucleus lateral partipsiMdL1
Subcoeruleus nucleusipsiSubC3
Spinal trigeminal nucleus interpolar partipsiSp5I2
Raphe magnus nucleusipsiRMg2
Raphe obscurus nucleusipsiROb2
Raphe pallidus nucleusipsiRPa2
Lateral paragigantocellular nucleusipsiLPGi-0.5
Retroambiguus nucleusipsiRAmb1
Rostral part of the ventromedial medulla oblongataipsiRMeObvm1
Lateral hypothalamic areaipsiLH1
Paraventricular hypothalamic nucleusipsiPa0.5
Zona incerta rostromedial partipsiZIrm0
Somatomotoric regions layer 5ipsiSMRL53
Locus coeruleuscontraLC0.5
Caudal part of ventral locus coeruleuscontraLCveca0.5
Medial reticular formationcontraRFm-0.5
Pontine reticular nucleus oral partcontraPnO0.5
Gigantocellular reticular nucleuscontraGi1
Gigantocellular reticular nucleus medial partcontraGiM-0.5
Lateral paragigantocellular nucleuscontraLPGi-0.5
Somatomotoric regions layer 5contraSMRL53
Extensor caudalis medialis muscleipsiMuscExCaMe1
Musculus extensor caudae lateralisipsiMuscExtLat3
Musculus abductor caudae dorsalisipsiMuscAbdCaDo0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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