University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Oculomotor system left


Abbreviation
OCS
Color       
Superior regionsMesencephalon

SynonymsAbbr.Language
Oculomotor area  
Oculomotor areas  
Ocular motor area Eng
Oculomotor complexOMCLat
Oculomotor systemOCSEng
Oculomotor complex Eng

SubregionsSide
3rd oculomotor nucleusleft
4th oculomotor nucleusleft
Area surrounding the oculomotor complexleft
Oculomotor nerve or its rootleft
Oculomotor nucleusleft
Extraocular motor nucleileft

Output to

NameSideAbbr.WeightDetails
Paralemniscal reticular formationipsiPLRF-0.5
Red nucleusipsiR1
Substantia nigra A9ipsiSN0
Ventral tegmental area A10ipsiVTA1
Interfascicular nucleusipsiIF1
Caudal linear nucleus of the rapheipsiCLi1
Dorsal tegmental nucleus ventromedial partipsiDTgVM1
Mesencephalic reticular formationipsiMRF1

Input from

NameSideAbbr.WeightDetails
Substantia nigra medial partipsiSNM-0.5
Ventral tegmental area A10ipsiVTA1
Lateral cerebellar nucleus ventral partipsiCERLV-0.5
Medial cerebellar nucleusipsiMed3
Prepositus nucleusipsiPr-0.5
Nucleus YipsiY3
Superior vestibular nucleusipsiSuVe3
Medial vestibular nucleusipsiMVe-0.5
Ventrobasal complex lateral part rostral partipsiVBLR1
Ventromedial thalamic nucleus caudal partipsiVMc2
Ventromedial thalamic nucleus rostral partipsiVMR2
Nucleus of the fields of ForelipsiF1
HabenulaipsiHAB0
Medial terminal nucleus of the accessory optic tractipsiMT1
Anterior cingulate cortex layer 5ipsiACCL52
Frontal cortex area 2ipsiFr23
Frontal cortex area 2 layer 5ipsiFr2L52
Frontal polar cortexipsiFP2.5
Agranular insular cortex dorsal partipsiAID2
Agranular insular cortex ventral partipsiAIV1
Orbital cortexipsiOrC2.5
Lateral orbital cortexipsiLO2
Interstitial nucleus of CajalcontraInC1
Interposed cerebellar nuclei caudal partcontraICNC3
Posterior interposed nucleuscontraCERpin1
Rostrocaudal extent of the interposed complexcontraICNrc1
Lateral cerebellar nucleus caudal partcontraCERLc1
Lateral cerebellar nucleus ventral partcontraCERLV1
Rostral half of the ventral lateral cerebellar nucleuscontraCERLVr1
Medial cerebellar nucleuscontraMed3
Abducens nucleuscontra6-0.5
Nucleus YcontraY3
Superior vestibular nucleuscontraSuVe3
Infracerebellar nucleuscontraInf3
RetinacontraRET-0.5
Frontal polar cortexcontraFP1
Agranular insular cortex dorsal partcontraAID1
Agranular insular cortex ventral partcontraAIV1
Lateral orbital cortexcontraLO1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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