University of Rostock

Department of Anatomy

Neuroscience Group

  Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Caudal midbrain right


Abbreviation
cMEC
Color       
Superior regionsMesencephalon

SynonymsAbbr.Language
Caudal midbraincMECEng

SubregionsSide
Mid caudal mesencephalonright

Output to

NameSideAbbr.WeightDetails
Mammillary bodycontraCMAM1
Agranular insular cortexcontraAI1
Jaw movement motor cortexcontraJMCx1
Rostral ventral medulla oblongataipsiRVMeO-0.5
Mammillary bodyipsiCMAM1
Mammillotegmental tractipsimtg-2
Agranular insular cortexipsiAI3
Jaw movement motor cortexipsiJMCx2.5
Cervical segment 1ipsiCS1-0.5
Cervical segment 2ipsiCS2-0.5
Cervical segment 3ipsiCS3-0.5
Cervical segment 4ipsiCS4-0.5
Cervical segment 5ipsiCS5-0.5
Cervical segment 6ipsiCS6-0.5
Cervical segment 7ipsiCS7-0.5
Cervical segment 8ipsiCS8-0.5

Input from

NameSideAbbr.WeightDetails
Diagonal band of BrocacontraDBB1.5
Nucleus of the horizontal limb of the diagonal bandcontraHDB1.5
Nucleus of the vertical limb of the diagonal bandcontraVDB1.5
Medial septal nucleuscontraMS1.5
Basal nucleus MeynertcontraB0
Magnocellular preoptic nucleuscontraMCPO1.5
Primary somatosensory cortexcontraS11
Deep dorsal horn C7contraDDHC7-0.5
Diagonal band of BrocaipsiDBB3
Nucleus of the horizontal limb of the diagonal bandipsiHDB3
Nucleus of the vertical limb of the diagonal bandipsiVDB3
Medial septal nucleusipsiMS3
Basal nucleus MeynertipsiB3
Magnocellular preoptic nucleusipsiMCPO3
Primary somatosensory cortexipsiS11.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications