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Rat connectome



Basal nucleus Meynert left


Abbreviation
B
Color       
Superior regionsSubstantia innominata nucleus basalis complex

SynonymsAbbr.Language
Basal nucleus MeynertBEng
Nucleus basalis MeynertNBM 
Magnocellular nucleus Meynert  
Nucleus basalis  
Nucleus basalis of Meynert  
Nucleus basalis magnocellularis  
Basal nucleus of MeynertBNM 
Magnocellular basal forebrain  
Cholinergic cell group 4 of MesulamCh4Eng
Magnocellular basal system Eng
Magnocellular basal nucleusMBNEng
Basal nucleus of MeynertBMEng
Basal forebrain cholinergic neurons Eng
Basal nucleus of MeynertBMnEng

SubregionsSide
Anteroposterior extent of the nucleus basalis Meynertleft
Basal nucleus Meynert anterior partleft
Basal nucleus Meynert caudal partleft
Basal nucleus Meynert dorsomedial partleft
Basal nucleus Meynert dorsoventral partleft
Basal nucleus Meynert intermediate divisonleft
Basal nucleus Meynert lateral partleft
Basal nucleus Meynert medial partleft
Basal nucleus Meynert mediocaudal partleft
Basal nucleus Meynert posterior divisionleft
Basal nucleus Meynert ventrolateral partleft
Rostral nucleus basalis Meynertleft
Transition from caudal to postmammillary caudal magnocellular nucleusleft
Central zone of the nucleus basalisleft
Basal nucleus Meynert ventralmost partleft
Middle third of the nucleus basalisleft
Basal nucleus Meynert ventral partleft
Basalis nucleus cholinergic neuronleft

Output to

NameSideAbbr.WeightDetails
Internal carotid arteryipsiica-0.5
Circulus arteriosusipsicia-0.5
MesencephalonipsiMEC-0.5
Caudal midbrainipsicMEC3
Central grayipsiCG1.5
Nuclei of the lateral lemniscusipsiNLL2
Central tegmental field dorsal partipsiTGACd0
Substantia nigra lateral partipsiSNL2
Substantia nigra medial partipsiSNM2
Ventral tegmental area A10ipsiVTA2
Peripeduncular areaipsiPPA2
Ventrolateral tegmental areaipsiVLTg1
Laterodorsal tegmental nucleusipsiLDTg1
Dorsal tegmental nucleusipsiDTg0.5
Pedunculopontine tegmental nucleusipsiPPTg2
Cerebellar cortexipsiCERC0
Cerebellar lobule 9ipsiCERL91
Cerebellar lobule 10ipsiCERL101
PonsipsiP-0.5
Locus coeruleusipsiLC1
Reticulotegmental nucleus of the ponsipsiRtTg-0.5
Pontine reticular nucleusipsiPRN-0.5
Pontine reticular nucleus oral partipsiPnO1
Pontine reticular nucleus caudal partipsiPNC1
Parabrachial nucleusipsiPB1
Lateral parabrachial nucleusipsiLPB2
Parvicellular reticular nucleusipsiPCRt-0.5
Subcoeruleus nucleus ventral partipsiSubCV-0.5
Medulla oblongataipsiMeOb-0.5
Nucleus of the solitary tractipsiSol1
Dorsal raphe nucleusipsiDR1.5
Median raphe nucleusipsiMnR0.5
A1 noradrenergic cellsipsiA1-0.5
Endopiriform systemipsiEnN-0.5
Diagonal band of BrocaipsiDBB2
Medial septal nucleusipsiMS2
Substantia innominataipsiSI1
Preoptic regionipsiPREO2
Medial preoptic area lateral partipsiMPAL-0.5
Lateral hypothalamic areaipsiLH2
Suprachiasmatic nucleusipsiSCh-0.5
ThalamusipsiT1.5
Posterior thalamic nuclear group dorsocaudal partipsiPoDC1
Mediodorsal thalamic nucleusipsiMD2.5
Mediodorsal thalamic nucleus caudal partipsiMDCa2.5
Mediodorsal thalamic nucleus central partipsiMDC2
Mediodorsal thalamic nucleus paralemellar divisionipsiMDpL-0.5
Ventrolateral thalamic nucleusipsiVL0.5
Ventral posterolateral thalamic nucleus posterior partipsiVPLP1
Barreloids of ventral posteromedial thalamic nucleusipsiBVPM0.5
Medial part of ventral posteromedial thalamic nucleusipsiVPMm1
Reticular thalamic nucleusipsiRt3
Reticular thalamic nucleus caudal partipsiRtc2
Reticular thalamic nucleus lateral partipsiRtL1
Optic chiasmipsiox-2
Habenular commissureipsihbc1
Lateral habenular nucleusipsiLHb0.5
Lateral habenular nucleus lateral partipsiLHbL0.5
Lateral habenular nucleus caudal subfieldipsiLHbcs4
Lateral habenular nucleus rostral partipsiLHbro2.5
Medial habenular nucleusipsiMHb1
Medial habenular nucleus rostral partipsiMHbr-0.5
Stria medullaris of the thalamusipsism2.5
Stria medullaris of the thalamus caudal partipsismc2.5
Basolateral amygdaloid nucleusipsiBL2
Globus pallidusipsiGP-0.5
Ventral pallidumipsiVP-0.5
Cerebral cortexipsiCEC3
AllocortexipsiALLOCX3
HippocampusipsiHIPP4
Dentate gyrusipsiDG-0.5
Field CA3 of hippocampusipsiCA3-0.5
Piriform cortexipsiPir3
Retrosplenial agranular cortexipsiRSA-1
Retrosplenial granular cortex subdivisionsipsiRSGsu2
Cingulate cortexipsiCg-1
Anterior cingulate cortexipsiACC3
Cingulate cortex area 1 caudal partipsiCg1c1
Cingulate cortex area 2 caudal partipsiCg2c1
Caudal cingulate cortexipsiCCg-0.5
Rostral part of the cingulate cortexipsiRCg-0.5
Prelimbic cortexipsiPrL2
Infralimbic cortexipsiIL2
NeocortexipsiNEOCX3
Frontal association cortexipsiFrA3
Frontal association cortex dorsal partipsiFrAd-0.5
Frontal cortex area 1ipsiFr1-0.5
Frontal cortex area 2ipsiFr22
Frontal cortex area 3ipsiFr33
Parietal association cortexipsiPtA3
Parietal cortex area 1ipsiPar1-3
Temporal association area 2ipsiTe2-0.5
Auditory regionsipsiAU2
Frontal polar cortexipsiFP3
Insular cortexipsiICX3
Agranular insular cortexipsiAI-3
Perirhinal cortexipsiA352
Prefrontal cortexipsiPFC3
Anterior prefrontal cortexipsiAPFC1
Somatomotoric regionsipsiSMR-0.5
Motoric regionsipsiM-0.5
Lateral prefrontal cortexipsilPFC2
Lateral agranular prefrontal cortexipsiAGl3
Forelimb motor cortexipsiFMCx3
Medial prefrontal cortexipsimPFC-0.5
Medial agranular prefrontal cortexipsiAGm1
Sensory regionsipsiSR3
Primary somatosensory cortexipsiS12
Primary somatosensory cortex face regionipsiS1FR-3
Primary somatosensory cortex forelimb regionipsiS1FL-3
Primary somatosensory cortex hindlimb regionipsiS1HL-3
Secondary somatosensory cortexipsiS2-0.5
Frontoparietal somatosensory cortexipsifpSR-0.5
Visual regionsipsiVR3
Primary visual cortexipsiV12
Secondary visual cortexipsiV2-0.5
Anterior medial frontal cortexipsiAMFC-0.5
Lateral orbital cortexipsiLO1
Interpeduncular nucleusipsiIP1
Interpeduncular nucleus caudal subnucleusipsiIPC2
Rostral pole of the interpeduncular nucleus caudal subnucleusipsiIPCr2
Interpeduncular nucleus intermediate subnucleusipsiIPI1.5
Interpeduncular nucleus rostral subnucleusipsiIPR2
Olfactory bulb A16ipsiMOB3
Septal regionipsiSER2
Cervical segment 1ipsiCS10
Caudal midbraincontracMEC0
Central graycontraCG1
Nuclei of the lateral lemniscuscontraNLL2
Central tegmental field dorsal partcontraTGACd0
Peripeduncular areacontraPPA0
Laterodorsal tegmental nucleuscontraLDTg1
Dorsal tegmental nucleuscontraDTg0.5
Pedunculopontine tegmental nucleuscontraPPTg2
Locus coeruleuscontraLC0.5
Reticulotegmental nucleus of the ponscontraRtTg-0.5
Pontine reticular nucleuscontraPRN-0.5
Ventrolateral pontine reticular formationcontravlPRF0.5
Pontine reticular nucleus caudal partcontraPNC1
Parabrachial nucleuscontraPB-0.5
Lateral parabrachial nucleuscontraLPB1
Parvicellular reticular nucleuscontraPCRt-0.5
Subcoeruleus nucleus ventral partcontraSubCV0.5
Dorsal raphe nucleuscontraDR1
Arcuate nucleuscontraArc0.5
Suprachiasmatic nucleuscontraSCh-0.5
Mediodorsal thalamic nucleuscontraMD2.5
Mediodorsal thalamic nucleus caudal partcontraMDCa2.5
Mediodorsal thalamic nucleus central partcontraMDC2
Optic chiasmcontraox-2
Habenular commissurecontrahbc1
Lateral habenular nucleus caudal subfieldcontraLHbcs4
Lateral habenular nucleus rostral partcontraLHbro2.5
Medial habenular nucleuscontraMHb1
Stria medullaris of the thalamuscontrasm2.5
Stria medullaris of the thalamus caudal partcontrasmc2.5
Bed nucleus of the stria terminaliscontraBST-0.5
HippocampuscontraHIPP-0.5
Caudal cingulate cortexcontraCCg-0.5
Rostral part of the cingulate cortexcontraRCg-0.5
Frontal association cortexcontraFrA-0.5
Parietal association cortexcontraPtA-0.5
Auditory regionscontraAU-0.5
Prefrontal cortexcontraPFC-0.5
Medial prefrontal cortexcontramPFC-0.5
Anterior medial frontal cortexcontraAMFC-0.5
Interpeduncular nucleus caudal subnucleuscontraIPC0
Interpeduncular nucleus intermediate subnucleuscontraIPI1.5

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG-1
Dorsolateral periaqueductal grayipsiDLPAG2
Dorsolateral periaqueductal gray caudal partipsiPAGdlc1
Dorsolateral periaqueductal gray rostral partipsiPAGdlr-3
Periaqueductal gray caudal dorsolateral partipsiPAGLDC1
Periaqueductal gray rostrocaudal extentipsiPAGroe1
Ventrolateral periaqueductal grayipsiVLPAG-0.5
Ventrolateral periaqueductal gray caudal partipsiPAGvlc1
Ventrolateral periaqueductal gray rostral partipsiPAGvlr-0.5
Superior colliculusipsiSC1
Tegmental areaipsiTGA1
Midbrain extrapyramidal areaipsiMEA2
Midbrain extrapyramidal area caudal partipsiMEAc3
Substantia nigra compact partipsiSNC4
Substantia nigra compact part medial tieripsiSNCM0
Substantia nigra reticular partipsiSNR2
Ventral tegmental area A10ipsiVTA1
Caudal linear nucleus of the rapheipsiCLi2
Peripeduncular areaipsiPPA3
Peripeduncular nucleusipsiPP0.5
Retrorubral nucleusipsiRR2
Laterodorsal tegmental nucleusipsiLDTg3
Ventral tegmental nucleusipsiVTg1
Pedunculopontine tegmental nucleusipsiPPTg3
Pedunculopontine tegmental nucleus pars compactaipsiPPNC-1
Locus coeruleusipsiLC1
Nucleus incertus pars compactaipsiNIc3
Pontomesencephalic grayipsiPoMG-0.5
Pontine tegmental fieldipsiPTF-1
Prepositus nucleusipsiPr-3
Mesencephalic reticular formationipsiMRF1
Pontine reticular nucleusipsiPRN1
Parabrachial nucleusipsiPB0
Koelliker Fuse nucleusipsiKF0
Lateral parabrachial nucleusipsiLPB4
Lateral parabrachial nucleus dorsal partipsiLPBD-1
Lateral parabrachial nucleus external partipsiLPBE-1
Parabrachial nucleus dorsal partipsiPBD1
Parabrachial nucleus medialipsiPBnMe1
Parabrachial nucleus ventral partipsiPBV1
Nucleus of the solitary tractipsiSol-3
Dorsal raphe nucleusipsiDR4
Dorsal raphe nucleus dorsomedial subdivisionipsiDRdm2
Dorsal raphe nucleus intermediate partipsiDRim3
Dorsal raphe nucleus lateral partipsiDRLa1
Dorsal raphe nucleus ventromedial subdivisionipsiDRvme3
Median raphe nucleusipsiMnR1.5
Median raphe nucleus caudal portionipsiMnRc1
Raphe magnus nucleusipsiRMg1
Ventral lateral medulla oblongataipsiMVL-3
Tuberomammillary nucleusipsiTuM0.5
Tuberomammillary nucleus lateral partipsiTuML1
HypothalamusipsiHYPO-0.5
Anterior lateral areaipsiALA0.5
Lateral hypothalamic areaipsiLH1
Tuberal division of the lateral hypothalamic areaipsiLHTC0.5
Medial zoneipsiMHA1
Ventromedial hypothalamic nucleusipsiVMH1
Periventricular zoneipsiPVZ1
A8 dopamine cells retrorubral groupipsiRRF2
Central medial thalamic nucleusipsiCM1
Paracentral thalamic nucleusipsiPC-1
Parafascicular thalamic nucleusipsiPF1.5
Zona incertaipsiZI1
Amygdaloid complexipsiAC1
Bed nucleus of the stria terminalisipsiBST-1
Bed nucleus of the stria terminalis lateral division dorsal partipsiBSTLD3
Central amygdaloid nucleusipsiCe4
Lateral capsular subdivision of the central nucleus of the amygdalaipsiCeLac3
Caudate putamenipsiCPu3
Dorsal striatumipsiCPud1
Posterior caudate putamenipsiCPup2
Ventral striatumipsiCPuv1
Ventromedial striatumipsiCPuvm2
Marginal division of the ventral striatumipsiCPuMdv-0.5
Lateral part of the middle caudate putamenipsiCPuMiL-0.5
Marginal DivisionipsiMrD-0.5
Subthalamic nucleusipsiSTh1.5
Hippocampal septalipsiHIPPs2
Hippocampal temporalipsiHIPPt3
Septohippocampal nucleusipsiSHi3
Entorhinal cortexipsiEnt1
Piriform cortexipsiPir3
Retrosplenial regionsipsiRS3
Anterior cingulate cortexipsiACC4
Cingulate cortex area 1ipsiCg11
Cingulate cortex area 2ipsiCg21
Cingulate cortex area 3 layer 5ipsiCg3L51
Prelimbic cortexipsiPrL3
Prelimbic cortex dorsal part layer 5ipsiPrLdL5-0.5
Infralimbic cortexipsiIL3
Frontal cortex area 2ipsiFr23
Parietal association cortexipsiPtA1.5
Auditory regionsipsiAU1
Insular cortexipsiICX3
Agranular insular cortexipsiAI2
Agranular insular cortex dorsal partipsiAID-0.5
Agranular insular cortex dorsal part deep layersipsiAIDdL-0.5
Agranular insular cortex posterior partipsiAIP2
Agranular insular cortex posterior deep layersipsiAIPdL1
Agranular insular cortex ventral partipsiAIV-0.5
Dysgranular insular cortexipsiDI-0.5
Prefrontal cortexipsiPFC1
Motoric regionsipsiM3
Lateral prefrontal cortexipsilPFC3
Lateral agranular prefrontal cortexipsiAGl1
Medial agranular prefrontal cortexipsiAGm1
Sensory regionsipsiSR1
Primary somatosensory cortexipsiS10.5
Visual regionsipsiVR0.5
Orbital cortexipsiOrC2
Ventrolateral orbital area deep layersipsiVLOd1
Interpeduncular nucleusipsiIP0
Interpeduncular nucleus apical subnucleusipsiIPA0.5
Interpeduncular nucleus caudal subnucleusipsiIPC0.5
Thoracal segment 6ipsiT60.5
Thoracal segment 7ipsiT70.5
Thoracal segment 8ipsiT80.5
Thoracal segment 9ipsiT90.5
Lumbar segment 6ipsiL60.5
Peripeduncular areacontraPPA0
Laterodorsal tegmental nucleuscontraLDTg-0.5
Pedunculopontine tegmental nucleuscontraPPTg-0.5
Pontomesencephalic graycontraPoMG-0.5
Dorsal raphe nucleus intermediate partcontraDRim-0.5
Basal nucleus parvicellular partcontraBpc1
Hippocampal septalcontraHIPPs0.5
Hippocampal temporalcontraHIPPt0.5
Entorhinal cortexcontraEnt0.5
Piriform cortexcontraPir0.5
Retrosplenial regionscontraRS0.5
Anterior cingulate cortexcontraACC0.5
Prelimbic cortexcontraPrL0.5
Infralimbic cortexcontraIL0.5
Parietal association cortexcontraPtA0
Auditory regionscontraAU0
Agranular insular cortexcontraAI0.5
Agranular insular cortex posterior partcontraAIP0.5
Motoric regionscontraM0
Lateral prefrontal cortexcontralPFC0.5
Sensory regionscontraSR0
Visual regionscontraVR0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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