University of Rostock

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Rat connectome



Mesencephalic trigeminal nucleus medial part right


Abbreviation
periMe5
Color       
Superior regionsMesencephalic trigeminal nucleus

SynonymsAbbr.Language
Mesencephalic trigeminal nucleus medial partperiMe5Eng
Peri-mesencephalic trigeminal nucleus Eng

Output to

NameSideAbbr.WeightDetails
Dorsomedial hypothalamic nucleus [Medial zone]contraDM-0.5
Posterior hypothalamic areacontraPHA-0.5
Ventrolateral periaqueductal grayipsiVLPAG-0.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM-0.5
Posterior hypothalamic areaipsiPHA-0.5

Input from

NameSideAbbr.WeightDetails
Prelimbic cortexcontraPrL1.5
Infralimbic cortexcontraIL1.5
Medial agranular prefrontal cortex rostral partcontrarAGm1
Medial agranular prefrontal cortex rostralmost partcontrarmAGm1.5
Dorsomedial periaqueductal grayipsiDMPAG0.5
Lateral periaqueductal grayipsiLPAG1.5
Ventrolateral periaqueductal grayipsiVLPAG3
Laterodorsal tegmental nucleusipsiLDTg2
A5 noradrenaline cellsipsiA50.5
Caudoventrolateral reticular nucleusipsiCVLR0.5
Mesencephalic reticular formationipsiMRF2
Pontine reticular nucleusipsiPRN0.5
Koelliker Fuse nucleusipsiKF1
Lateral parabrachial nucleusipsiLPB1
Parvicellular reticular nucleusipsiPCRt0.5
Vestibular nucleiipsiVnc0.5
Nucleus of the solitary tract caudal partipsiSolca2
Nucleus of the solitary tract rostral partipsiSolro1.5
Dorsal raphe nucleusipsiDR2
Median raphe nucleusipsiMnR0.5
Raphe magnus nucleusipsiRMg1
B9 serotonin cellsipsiB91
Caudoventral reticular nucleusipsiCVL0.5
Dorsomedial rostral medulla oblongataipsiMeObdmr1
Lateral paragigantocellular nucleusipsiLPGi3
Preoptic regionipsiPREO1.5
Medial preoptic nucleusipsiMPO1
Tuberomammillary nucleusipsiTuM0.5
Preoptic anterior regionipsiPAreg2
Lateral hypothalamic areaipsiLH3
Dorsal hypothalamic areaipsiDA3
Ventromedial hypothalamic nucleusipsiVMH0.5
Arcuate nucleusipsiArc0.5
Paraventricular hypothalamic nucleusipsiPa2
Perifornical nucleusipsiPeF1.5
Lateral habenular nucleusipsiLHb1
Bed nucleus of the stria terminalis lateral divisionipsiBSTL4
Bed nucleus of the stria terminalis medial divisionipsiBSTM2
Central amygdaloid nucleusipsiCe4
ClaustrumipsiCl2
Prelimbic cortexipsiPrL3
Infralimbic cortexipsiIL3
Frontal association cortexipsiFrA0.5
Frontal cortex area 1ipsiFr11
Insular cortexipsiICX1
Medial agranular prefrontal cortex rostral partipsirAGm3
Medial agranular prefrontal cortex rostralmost partipsirmAGm3
Primary somatosensory cortex hindlimb regionipsiS1HL0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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