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Rat connectome
Claustrum right
Abbreviation
Cl
Color
Superior regions
Basal ganglia
Synonyms
Abbr.
Language
CLA
Claustrum
Cl
Eng
Subregions
Side
Anterior part of the claustrum
right
Anterodorsal part of the claustrum
right
Anteroposterior part of the claustrum
right
Caudal part of claustrum
right
Central part of claustrum
right
Claustral region where the dorsal and ventral subnuclei adjoin
right
Claustrum deep layers
right
Dorsal part of claustrum
right
Dorsolateral part of claustrum
right
Dorsoventral claustrum
right
Lateral part of claustrum
right
Medial part of claustrum
right
Mediolateral part of the claustrum
right
Posterior part of the claustrum
right
Posteroventral part of the claustrum
right
Rostral part of claustrum
right
Ventral part of claustrum
right
Claustrum cell populations
right
Neurons of claustrum along the external capsule
right
Claustrum caudoventral part
right
Insular claustrum
right
Claustrum deep
right
Claustrum superficial
right
Claustrum ventrolateral part
right
Output to
Name
Side
Abbr.
Weight
Details
Dorsolateral periaqueductal gray
contra
DLPAG
0
Lateral periaqueductal gray
contra
LPAG
0
Ventrolateral periaqueductal gray
contra
VLPAG
1
Ventral tegmental area A10
contra
VTA
0.5
Ventral tegmental area A10 middle third
contra
VTAmit
-0.5
Middle part of the retrorubral field
contra
RRmi
0.5
Mesencephalic trigeminal nucleus caudal pole
contra
Me5cp
-0.5
Dorsomedial hypothalamic nucleus [Medial zone]
contra
DM
-0.5
A8 dopamine cells retrorubral group lateral part
contra
RRFL
1.5
A8 dopamine cells retrorubral group medial part
contra
RRFm
0.5
Submedius thalamic nucleus
contra
Sub
1
Subparafascicular thalamic nucleus caudal part
contra
SPFc
0.5
Subparafascicular thalamic nucleus medial part
contra
SPFme
0.5
Subparafascicular thalamic nucleus rostral part
contra
SPFr
0.5
Cingulate cortex
contra
Cg
1
Anterior cingulate cortex
contra
ACC
2
Prelimbic cortex
contra
PrL
2
Infralimbic cortex
contra
IL
2
Neocortex
contra
NEOCX
1
Frontal association cortex
contra
FrA
1.5
Left frontal field in the anterior third of frontal association cortex
contra
FrAatLF
1
Frontal cortex area 3
contra
Fr3
1
Parietal association cortex
contra
PtA
0
Parietal cortex posterior area
contra
ParP
-1
Parietal cortex posterior area dorsal part
contra
ParPD
1
Auditory regions
contra
AU
-0.5
Caudal half of agranular insular area in the fundus and dorsal lip of rhinal sulcus
contra
AIChF
0
Agranular insular cortex posterior part
contra
AIP
-0.5
Perirhinal cortex
contra
A35
0
Somatomotoric regions
contra
SMR
2
Motoric regions
contra
M
1
Lateral agranular prefrontal cortex
contra
AGl
1
Medial agranular prefrontal cortex
contra
AGm
0.5
Medial agranular cortex close to the cingulate cortex
contra
mPFCcCg
0.5
Sensory regions
contra
SR
2
Primary somatosensory cortex
contra
S1
1
Primary somatosensory cortex barrel field
contra
S1BF
0
Primary somatosensory cortex forelimb region
contra
S1FL
0
Visual regions
contra
VR
2
Primary visual cortex
contra
V1
1
Posterior half of the primary visual cortex
contra
V1ph
1
Secondary visual cortex
contra
V2
1
Secondary visual cortex medial area
contra
V2M
1
Medial orbital cortex
contra
MO
-0.5
Commissural systems
contra
cos
-2
Medial paralemniscal nucleus
ipsi
MPL
1
Nucleus of Darkschewitsch
ipsi
Dk
1
Oculomotor nucleus
ipsi
3
0
Dorsolateral periaqueductal gray
ipsi
DLPAG
-0.5
Lateral periaqueductal gray
ipsi
LPAG
1
Ventrolateral periaqueductal gray
ipsi
VLPAG
2
Rostromedial tegmental nucleus
ipsi
RMTg
1
Substantia nigra compact part
ipsi
SNC
2
Substantia nigra reticular part
ipsi
SNR
1
Ventral tegmental area A10
ipsi
VTA
2
Ventral tegmental area A10 caudal part
ipsi
VTAcp
0.5
Interfascicular nucleus
ipsi
IF
-0.5
Ventral tegmental area A10 middle third
ipsi
VTAmit
-0.5
Ventral tegmental area rostral part
ipsi
VTAR
1
Paranigral nucleus
ipsi
PN
-0.5
Middle part of the retrorubral field
ipsi
RRmi
1
Substantia nigra ventral tegmental area transition region
ipsi
SNVTAtn
-0.5
Edinger Westphal nucleus
ipsi
EW
1
Middle cerebellar peduncle
ipsi
mcp
0
Superior cerebellar peduncle
ipsi
sucep
-2
Barringtons nucleus
ipsi
Bar
0.5
Locus coeruleus
ipsi
LC
0.5
Pericoerulear region
ipsi
PCR
2
Peribrachial region
ipsi
PBR
2
Parabrachial nucleus
ipsi
PB
-0.5
Parvicellular reticular nucleus
ipsi
PCRt
1.5
Mesencephalic trigeminal nucleus
ipsi
Me5
2
Mesencephalic trigeminal nucleus medial part
ipsi
periMe5
2
Mesencephalic trigeminal nucleus caudal pole
ipsi
Me5cp
-0.5
Medial vestibular nucleus
ipsi
MVe
0.5
Dorsal raphe nucleus
ipsi
DR
3
Dorsal raphe nucleus caudal part
ipsi
DRC
2
Dorsal raphe nucleus central part
ipsi
DRcep
2
Dorsal raphe nucleus lateral wing
ipsi
DRlw
2
Dorsal raphe nucleus rostral part
ipsi
DRr
2
Central raphe nucleus ventral part
ipsi
CRNvp
1
Median eminence middle portion subependymal layer
ipsi
MEmise
1
Endopiriform system
ipsi
EnN
1
Caudal endopiriform region
ipsi
CEn
-0.5
Central endopiriform system
ipsi
CEnN
-0.5
Dorsal endopiriform nucleus
ipsi
DEn
2
Rostral endopiriform region
ipsi
REn
-0.5
Medial preoptic area
ipsi
MPA
-0.5
Ventrolateral preoptic nucleus
ipsi
VLPO
1
Ventromedial preoptic nucleus
ipsi
VMPO
-0.5
Dorsal tenia tecta
ipsi
DTT
1
Ventral tenia tecta
ipsi
VTT
1
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]
ipsi
JPVC
0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]
ipsi
JPVR
0.5
Lateral hypothalamic area
ipsi
LH
4
Lateral hypothalamic area anterior part
ipsi
LHAa
2
Lateral hypothalamic area juxtadorsomedial region
ipsi
JDM
1
Lateral hypothalamic area medial part
ipsi
LHAm
3
Lateral hypothalamic area motor related juxtaventromedial region dorsal zone
ipsi
LHAjvd
0.5
Lateral hypothalamic area motor related juxtaventromedial region ventral zone
ipsi
LHAjvv
0.5
Lateral hypothalamic area perifornical part
ipsi
PFx
3
Lateral hypothalamic area posterior part
ipsi
LHAp
1
Tuberal region of lateral hypothalamus
ipsi
TuLH
2
Medial zone
ipsi
MHA
1
Dorsomedial hypothalamic nucleus [Medial zone]
ipsi
DM
-0.5
Arcuate nucleus
ipsi
Arc
-0.5
Arcuate nucleus ventromedial part
ipsi
ArcVM
2
Suprachiasmatic nucleus
ipsi
SCh
2
A8 dopamine cells retrorubral group lateral part
ipsi
RRFL
3
A8 dopamine cells retrorubral group medial part
ipsi
RRFm
2
Centrolateral thalamic nucleus
ipsi
CL
1
Posterior thalamic nuclear group
ipsi
Po
1
Mediodorsal thalamic nucleus caudal part
ipsi
MDCa
3
Mediodorsal thalamic nucleus central part
ipsi
MDC
2
Mediodorsal thalamic nucleus lateral part
ipsi
MDL
2
Mediodorsal thalamic nucleus medial part
ipsi
MDM
2
Submedius thalamic nucleus
ipsi
Sub
2
Paratenial thalamic nucleus
ipsi
PT
1
Paraventricular thalamic nucleus
ipsi
PV
3
Reuniens thalamic nucleus
ipsi
Re
1
Reuniens thalamic nucleus caudomedial division
ipsi
Recm
3
Reunienes thalamic nucleus rostromedial division
ipsi
Rerm
3
Reuniens thalamic nucleus rostrolateral division
ipsi
Rerl
3
Ventral posteromedial thalamic nucleus caudal part
ipsi
VPMC
1
Reticular thalamic nucleus caudal part
ipsi
Rtc
-10
Reticular thalamic nucleus intermediate part
ipsi
Rti
-10
Subparafascicular thalamic nucleus caudal part
ipsi
SPFc
1
Subparafascicular thalamic nucleus medial part
ipsi
SPFme
1
Subparafascicular thalamic nucleus rostral part
ipsi
SPFr
2
Lateral habenular nucleus
ipsi
LHb
1
Pineal gland
ipsi
Pi
2
Dorsal bank of the anterior portion of the rhinal fissure
ipsi
darf
2
Basolateral amygdaloid nucleus
ipsi
BL
-0.5
Anterior basolateral nucleus
ipsi
BLA
1
Posterior basolateral nucleus
ipsi
BLP
1
Basomedial amygdaloid nucleus
ipsi
BM
-0.5
Posterior basomedial nucleus
ipsi
BMP
1
Lateral amygdaloid nucleus
ipsi
LA
1
Bed nucleus of the stria terminalis
ipsi
BST
2
Bed nucleus of the stria terminalis anterior dorsal area
ipsi
BSTAD
2
Bed nucleus of the stria terminalis anterior lateral area
ipsi
BSTAL
2
Interstitial nucleus of the posterior limb of the anterior commissure medial part
ipsi
IPACM
2
Amygdalopiriform transition area
ipsi
APir
1
Cortical amygdaloid nucleus
ipsi
CAn
-0.5
Anterior cortical amygdaloid nucleus
ipsi
ACo
-0.5
Posterior amygdaloid nucleus
ipsi
COAp
0
Posterolateral cortical nucleus
ipsi
PLCo
0
Nucleus of the lateral olfactory tract
ipsi
LOT
1
Medial amygdaloid nucleus
ipsi
Me
-0.5
Posteromedial cortical nucleus
ipsi
PMCo
1
Striatum
ipsi
STR
-0.5
Accumbens nucleus
ipsi
Ac
-0.5
Dorsomedial striatum
ipsi
CPudm
-0.5
Tail of the striatum
ipsi
CPuTa
-0.5
Subthalamic nucleus
ipsi
STh
1
Dorsal hippocampus
ipsi
HIPPd
-0.5
Dentate gyrus
ipsi
DG
0
Dorsal hippocampus dentate gyrus
ipsi
DDG
3
Ventral hippocampus dentate gyrus
ipsi
VDG
3
Field CA1 of hippocampus
ipsi
CA1
3
Field CA1 of hippocampus dorsal
ipsi
CA1d
0
Field CA1 of hippocampus ventral part
ipsi
CA1v
0
Field CA2 of hippocampus
ipsi
CA2
0
Field CA3 of hippocampus
ipsi
CA3
0
Subiculum
ipsi
S
-0.5
Subiculum dorsal part
ipsi
Sd
0
Subiculum ventral part
ipsi
Sv
-0.5
Posterior hippocampus
ipsi
HIPPpo
-0.5
Ventral hippocampus
ipsi
HIPPv
-0.5
Indusium griseum
ipsi
IG
0
Presubiculum
ipsi
PrS
1.5
Parasubiculum
ipsi
PaS
1.5
Postsubiculum
ipsi
Post
1
Lateral entorhinal cortex
ipsi
LEnt
3
Lateral entorhinal cortex lateral part
ipsi
LEntLa
2.5
Lateral entorhinal cortex medial part
ipsi
LEntM
1.5
Lateral entorhinal cortex ventral part
ipsi
VLEA
1
Lateral entorhinal cortex ventromedial part
ipsi
VMEAL
1
Lateral entorhinal cortex intermediate part
ipsi
LEnti
2.5
Medial entorhinal cortex
ipsi
MEnt
2
Medial entorhinal cortex dorsal part
ipsi
MEntD
3
Medial entorhinal cortex lateral part
ipsi
MEntL
1.5
Medial entorhinal cortex layer 5
ipsi
MEntLyL5
2
Medial entorhinal field medial part
ipsi
MEntFm
2
Intermediate medial entorhinal cortex
ipsi
MEntim
0.5
Piriform cortex
ipsi
Pir
3
Postpiriform transition area
ipsi
TR
1.5
Retrosplenial regions
ipsi
RS
2
Retrosplenial dorsal
ipsi
RSd
2
Retrosplenial ventral part
ipsi
RSPv
0.5
Retrosplenial ventral a
ipsi
RSv-a
2
Retrosplenial area ventral part zone b/c
ipsi
RSPv-bc
0
Retrosplenial cortex middle part layer 1
ipsi
RSmiL1
-0.5
Retrosplenial cortex middle part layer 2
ipsi
RSmiL2
-0.5
Retrosplenial cortex middle part layer 3
ipsi
RSmiL3
-0.5
Retrosplenial cortex middle part layer 4
ipsi
RSmiL4
-0.5
Retrosplenial cortex middle part layer 5
ipsi
RSmiL5
-0.5
Retrosplenial cortex middle part layer 6
ipsi
RSmiL6
-0.5
Retrosplenial agranular cortex
ipsi
RSA
3
Retrosplenial agranular cortex lateral part
ipsi
RSALa
-0.5
Retrosplenial dysgranular cortex
ipsi
RSdys
-0.5
Midrostrocaudal part of the retrosplenial dysgranular cortex
ipsi
RSdysmrc
-0.5
Retrosplenial granular cortex
ipsi
RSGra
-0.5
Retrosplenial granular cortex a region
ipsi
RSGa
-0.5
Cingulate cortex
ipsi
Cg
2
Anterior cingulate cortex
ipsi
ACC
3
Anterior cingulate cortex anterior part
ipsi
ACCa
-1
Anterior cingulate cortex posterior part
ipsi
ACCp
-1
Cingulate cortex area 1 caudal part
ipsi
Cg1c
1
Cingulate cortex area 2 caudal part
ipsi
Cg2c
1
Dorsal anterior cingulate cortex
ipsi
DACC
3
Ventral anterior cingulate cortex
ipsi
VACC
2.5
Medial cingulate cortex
ipsi
MCg
-0.5
Posterior cingulate cortex
ipsi
PCC
-0.5
Posterior cingulate cortex anterior part
ipsi
PCCa
-1
Posterior cingulate cortex posterior part
ipsi
PCCp
-1
Prelimbic cortex
ipsi
PrL
3
Infralimbic cortex
ipsi
IL
3
Infralimbic cortex rostral part
ipsi
ILR
-0.5
Neocortex
ipsi
NEOCX
-0.5
Frontal association cortex
ipsi
FrA
3
Left frontal field in the anterior third of frontal association cortex
ipsi
FrAatLF
3
Fr1-Fr2 transition area
ipsi
Fr1Fr2T
2
Frontal cortex area 1
ipsi
Fr1
1.5
Frontal cortex area 2
ipsi
Fr2
1.5
Frontal cortex area 2 medial part
ipsi
Fr2M
3
Most ventral part of the pregenual part of the anteromedial cortex
ipsi
Fr2mvpg
2
Frontal cortex area 3
ipsi
Fr3
3
Parietal association cortex
ipsi
PtA
1
Parietal cortex posterior area
ipsi
ParP
2
Parietal cortex posterior area dorsal part
ipsi
ParPD
3
Temporal cortex
ipsi
TE
1.5
Temporal association area 3
ipsi
Te3
-0.5
Auditory regions
ipsi
AU
0.5
Primary auditory cortex
ipsi
Au1
0.5
Ventral auditory areas
ipsi
AUDv
0.5
Frontal polar cortex
ipsi
FP
2
Caudal half of agranular insular area in the fundus and dorsal lip of rhinal sulcus
ipsi
AIChF
3
Agranular insular cortex dorsal part
ipsi
AID
2.5
Agranular insular cortex posterior part
ipsi
AIP
2.5
Agranular insular cortex ventral part
ipsi
AIV
2.5
Dysgranular insular cortex
ipsi
DI
-0.5
Gustatory dysgranular insular cortex
ipsi
DIg
2.5
Granular insular cortex
ipsi
GI
2.5
Perirhinal cortex
ipsi
A35
4
Ectorhinal cortex
ipsi
A36
3
Postrhinal cortex
ipsi
POR
3
Prefrontal cortex
ipsi
PFC
3
Prefrontal cortex supragenual part
ipsi
sgPFC
2
Dorsal part of the pregenual sector of the prefrontal cortex
ipsi
dpgPFC
2
Somatomotoric regions
ipsi
SMR
3
Motoric regions
ipsi
M
1.5
Lateral agranular prefrontal cortex
ipsi
AGl
3
Elbow flexion motor cortex
ipsi
EFMCx
1
Ankle dorsiflexion motor cortex
ipsi
ADFMCx
2
Ankle plantar flexion motor cortex
ipsi
APFMCx
2
Hip flexion motor cortex
ipsi
HFMCx
2
Medial prefrontal cortex
ipsi
mPFC
3
Medial prefrontal cortex posterior part
ipsi
mPFCp
3
Medial agranular prefrontal cortex
ipsi
AGm
4
Medial agranular prefrontal cortex rostral part
ipsi
rAGm
1
Medial agranular cortex close to the cingulate cortex
ipsi
mPFCcCg
4
Sensory regions
ipsi
SR
3
Primary somatosensory cortex
ipsi
S1
0.5
Primary somatosensory cortex barrel field
ipsi
S1BF
2
Primary somatosensory cortex forelimb region
ipsi
S1FL
0
Secondary somatosensory cortex
ipsi
S2
0.5
Visual regions
ipsi
VR
1.5
Area 17 area 18b border region
ipsi
VR1B2R
0.5
Primary visual cortex
ipsi
V1
3
Posterior half of the primary visual cortex
ipsi
V1ph
3
Primary visual cortex layer 5
ipsi
V1L5
3
Primary visual cortex layer 6
ipsi
V1L6
3
Secondary visual cortex
ipsi
V2
3
Secondary visual cortex medial area
ipsi
V2M
3
Secondary visual cortex medial area layer 4
ipsi
V2ML4
2
Secondary visual cortex medial area layer 3
ipsi
V2ML3
2
Secondary visual cortex medial area layer 1
ipsi
V2ML1
2
Secondary visual cortex medial area layer 2
ipsi
V2ML2
2
Secondary visual cortex medial area layer 5
ipsi
V2ML5
3
Secondary visual cortex medial area layer 6
ipsi
V2ML6
3
Secondary visual cortex lateral area
ipsi
V2L
3
Secondary visual cortex lateral area infragranular layers
ipsi
V2LigL
1
Secondary visual cortex lateral area layer 5
ipsi
V2LL5
3
Secondary visual cortex lateral area layer 6
ipsi
V2LL6
3
Primary visual cortex binocular area
ipsi
V1B
2
Primary visual cortex monocular area
ipsi
V1M
3
Intermediolateral cortical visual area
ipsi
VISli
0.5
Mediolateral cortical visual area
ipsi
VISlm
0
Posterolateral cortical visual area
ipsi
VISpl
0.5
Anterolateral cortical visual area
ipsi
VISal
0.5
Rostrolateral cortical visual area
ipsi
VISrl
0.5
Anteromedial cortical visual area
ipsi
VISam
2
Anteromedial cortical visual area layer 4
ipsi
VISamL4
0.5
Anteromedial cortical visual area infragranular layers
ipsi
VISamiL
3
Anteromedial cortical visual area deep part of layer 6
ipsi
VISamdL6
0.5
Anteromedial cortical visual area supragranular layers
ipsi
VISamsgL
0.5
Anteromedial cortical visual area white matter
ipsi
VISamwL
0
Posteromedial cortical visual area
ipsi
VISpm
0.5
Anterior medial frontal cortex
ipsi
AMFC
1
Orbital cortex
ipsi
OrC
3
Lateral orbital cortex
ipsi
LO
3
Medial orbital cortex
ipsi
MO
-0.5
Ventral orbital cortex
ipsi
VO
2.5
Ventrolateral orbital area
ipsi
VLO
3
Ventrolateral orbital area posterior part
ipsi
VLOp
1
Neocortex layer 4
ipsi
NEOCXL4
-0.5
Neocortex layers 5-6
ipsi
NEOCXL56
-0.5
Commissural systems
ipsi
cos
-2
Interpeduncular nucleus
ipsi
IP
1
Accessory olfactory bulb
ipsi
AOB
0
Olfactory bulb A16
ipsi
MOB
0
Anterior olfactory nucleus
ipsi
AON
4
Input from
Name
Side
Abbr.
Weight
Details
Ventral tegmental area A10
contra
VTA
4
Cingulate cortex
contra
Cg
3
Cingulate cortex layer 5
contra
CgL5
3
Infralimbic cortex superficial layers
contra
ILisL
-0.5
Infralimbic cortex layer 6
contra
ILL6
0
Infralimbic cortex intermediate layers
contra
ILiLim
-0.5
Frontal association cortex
contra
FrA
0
Frontal cortex area 2
contra
Fr2
3
Parietal association cortex
contra
PtA
0
Motoric regions
contra
M
0.5
Lateral agranular prefrontal cortex
contra
AGl
3
Lateral agranular prefrontal cortex layer 1
contra
AGlL1
3
Rostral part of lateral agranular prefrontal cortex
contra
AGlr
1
Whiskers motor cortex
contra
WMCx
-0.5
Whiskers motor cortex layer 5
contra
WMCxL5
0.5
Whiskers motor cortex layer 6
contra
WMCxL6
0.5
Medial agranular prefrontal cortex
contra
AGm
3
Medial agranular prefrontal cortex layer 5
contra
AGmL5
3
Medial agranular prefrontal cortex medial part
contra
mAGm
3
Medial agranular prefrontal cortex rostral part
contra
rAGm
2.5
Primary somatosensory cortex barrel field
contra
S1BF
0
Primary visual cortex
contra
V1
0.5
Substantia nigra A9
ipsi
SN
3
Substantia nigra compact part
ipsi
SNC
3
Substantia nigra lateral part
ipsi
SNL
1
Substantia nigra medial part
ipsi
SNM
1
Substantia nigra reticular part
ipsi
SNR
1
Ventral tegmental area A10
ipsi
VTA
4
Ventral tegmental area A10 lateral nuclei
ipsi
VTALN
1
Ventral tegmental area A10 medial nuclei
ipsi
VTAmn
0
Ventral tegmental area posterior part
ipsi
VTAP
2
Retrorubral nucleus
ipsi
RR
1
Locus coeruleus
ipsi
LC
2
Prelocus coeruleus nucleus
ipsi
PLC
0
Nucleus incertus pars compacta
ipsi
NIc
2
Nucleus incertus pars dissipata
ipsi
NId
2
Lateral parabrachial nucleus external part inner portion
ipsi
LPBEip
0
Parabrachial nucleus external divison lateral part
ipsi
PBeDL
1
Parabrachial nucleus medial
ipsi
PBnMe
1
Raphe nuclei
ipsi
RAN
1
Dorsal raphe nucleus caudal part non serotoninergic population
ipsi
DRCnsp
0.5
Dorsal raphe nucleus dorsal part non serotoninergic population
ipsi
DRDnsp
0.5
Dorsal raphe nucleus interfascicular part non serotoninergic population
ipsi
DRInsp
0.5
Dorsal raphe nucleus lateral wing non serotoninergic population
ipsi
DRIwnsp
0.5
Dorsal raphe nucleus midrostrocaudal part non serotoninergic population
ipsi
DRmrcnsp
0.5
Dorsal raphe nucleus rostral part
ipsi
DRr
1
Dorsal raphe nucleus rostral part non serotoninergic population
ipsi
DRrnsp
0.5
Dorsal raphe nucleus ventral part non serotoninergic population
ipsi
DRVnsp
0.5
Dorsal raphe nucleus ventrolateral part non serotoninergic population
ipsi
DRVLnsp
0.5
Median raphe nucleus
ipsi
MnR
2
Superior central raphe nucleus
ipsi
CS
1
Median eminence middle portion subependymal layer
ipsi
MEmise
0
Endopiriform system
ipsi
EnN
-0.5
Caudal endopiriform region
ipsi
CEn
1
Central endopiriform system
ipsi
CEnN
-0.5
Dorsal endopiriform nucleus
ipsi
DEn
0.5
Middle endopiriform region
ipsi
MEn
1
Preendopiriform region
ipsi
PEn
0
Rostral endopiriform region
ipsi
REn
1
Ventral endopiriform nucleus
ipsi
VEn
1.5
Diagonal band of Broca
ipsi
DBB
1
Substantia innominata
ipsi
SI
0
Dorsal tenia tecta
ipsi
DTT
0
Ventral tenia tecta
ipsi
VTT
0
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]
ipsi
JPVC
0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]
ipsi
JPVR
0
Lateral hypothalamic area
ipsi
LH
3
Lateral hypothalamic area juxtadorsomedial region
ipsi
JDM
0
Lateral hypothalamic area motor related juxtaventromedial region dorsal zone
ipsi
LHAjvd
0
Lateral hypothalamic area motor related juxtaventromedial region ventral zone
ipsi
LHAjvv
0
Lateral hypothalamic area perifornical part
ipsi
PFx
3
Lateral hypothalamic area posterior part
ipsi
LHAp
1
Dorsomedial hypothalamic nucleus [Medial zone]
ipsi
DM
3
Dorsomedial hypothalamic nucleus dorsomedial part
ipsi
DMDM
3
Posterior hypothalamic area
ipsi
PHA
3
Posterior hypothalamic nucleus caudal part
ipsi
PHCa
0
Posterior hypothalamic nucleus rostral part
ipsi
PHRo
1
Arcuate nucleus ventromedial part
ipsi
ArcVM
0
Supramammillar nucleus
ipsi
SuM
1
Supramammillar nucleus lateral part
ipsi
SuML
-0.5
Supramammillar nucleus lateral part lateral subpart
ipsi
SuMLL
1
Supramammillar nucleus lateral part medial subpart
ipsi
SuMLM
3
Supramammillar nucleus medial part
ipsi
SuMM
1
Central medial thalamic nucleus
ipsi
CM
-0.5
Central medial thalamic nucleus caudal part
ipsi
CMca
2
Central medial thalamic nucleus rostral part
ipsi
CMr
2
Paracentral thalamic nucleus
ipsi
PC
1
Parafascicular thalamic nucleus
ipsi
PF
1
Rhomboid thalamic nucleus
ipsi
Rh
3
Mediodorsal thalamic nucleus
ipsi
MD
-0.5
Submedius thalamic nucleus
ipsi
Sub
0
Paratenial thalamic nucleus
ipsi
PT
1.5
Paraventricular thalamic nucleus
ipsi
PV
-0.5
Paraventricular thalamic nucleus anterior part
ipsi
PVA
1.5
Paraventricular thalamic nucleus caudal part
ipsi
PVca
1
Paraventricular thalamic nucleus dorsal part
ipsi
PVdo
1
Paraventricular thalamic nucleus posterior part
ipsi
PVP
1.5
Paraventricular thalamic nucleus rostral part
ipsi
PVr
1
Paraventricular thalamic nucleus ventral part
ipsi
PVV
1
Reuniens thalamic nucleus
ipsi
Re
3
Subparafascicular thalamic nucleus
ipsi
SPF
1
Subparafascicular thalamic nucleus rostral part
ipsi
SPFr
1
Ventral medial nucleus of the thalamus
ipsi
VMT
-0.5
Zona incerta
ipsi
ZI
-0.5
Basal nucleus
ipsi
Bnc
3
Basolateral amygdaloid nucleus
ipsi
BL
-0.5
Anterior basolateral nucleus
ipsi
BLA
3
Basolateral nucleus rostral part
ipsi
BLRP
2
Posterior basolateral nucleus
ipsi
BLP
2
Basomedial amygdaloid nucleus
ipsi
BM
-0.5
Anterior basomedial nucleus
ipsi
BMA
0
Posterior basomedial nucleus
ipsi
BMP
1
Lateral amygdaloid nucleus
ipsi
LA
2
Lateral nucleus caudal two-thirds
ipsi
LActt
0
Amygdalopiriform transition area
ipsi
APir
0
Cortical amygdaloid nucleus
ipsi
CAn
-0.5
Anterior cortical amygdaloid nucleus
ipsi
ACo
-0.5
Posterior amygdaloid nucleus
ipsi
COAp
1.5
Posterolateral cortical nucleus
ipsi
PLCo
1
Nucleus of the lateral olfactory tract
ipsi
LOT
0
Medial amygdaloid nucleus
ipsi
Me
2
Medial amygdaloid nucleus anterodorsal part
ipsi
MeAD
1
Posteromedial cortical nucleus
ipsi
PMCo
0
Dorsal part of claustrum
ipsi
DCl
3
Ventral part of claustrum
ipsi
VCl
3
Upper part of the ventral part of claustrum
ipsi
VClu
-0.5
Ventral pallidum lateral part
ipsi
VPlp
2
Ventral striatum
ipsi
CPuv
0
Ventrolateral striatum
ipsi
CPuvl
-0.5
Caudate putamen dorsal circumference
ipsi
CPudci
-0.5
Caudate putamen lateral circumference
ipsi
CPuLc
-0.5
Caudate putamen ventral circumference
ipsi
CPuvci
-0.5
Parasubthalamic nucleus
ipsi
PSTh
3
Dentate gyrus
ipsi
DG
0
Field CA1 of hippocampus dorsal
ipsi
CA1d
0
Field CA1 of hippocampus ventral part
ipsi
CA1v
2
Field CA2 of hippocampus
ipsi
CA2
0
Field CA3 of hippocampus
ipsi
CA3
0
Subiculum dorsal part
ipsi
Sd
0
Subiculum ventral part
ipsi
Sv
1.5
Indusium griseum
ipsi
IG
0
Parasubiculum
ipsi
PaS
0
Postsubiculum
ipsi
Post
0
Lateral entorhinal cortex
ipsi
LEnt
2.5
Medial entorhinal cortex
ipsi
MEnt
1
Medial entorhinal cortex dorsal part
ipsi
MEntD
1
Piriform cortex
ipsi
Pir
0.5
Postpiriform transition area
ipsi
TR
0
Retrosplenial regions
ipsi
RS
-1
Retrosplenial dorsal
ipsi
RSd
0.5
Retrosplenial ventral part
ipsi
RSPv
0.5
Retrosplenial agranular cortex
ipsi
RSA
3
Cingulate cortex
ipsi
Cg
-0.5
Cingulate cortex area 1 caudal part
ipsi
Cg1c
1.5
Cingulate cortex area 2 caudal part
ipsi
Cg2c
1.5
Dorsal anterior cingulate cortex
ipsi
DACC
3
Ventral anterior cingulate cortex
ipsi
VACC
3
Cingulate cortex layer 3
ipsi
CgL3
1
Cingulate cortex layer 5
ipsi
CgL5
1.5
Posterior cingulate cortex
ipsi
PCC
3
Prelimbic cortex
ipsi
PrL
3
Prelimbic cortex dorsal part
ipsi
PrLd
1.5
Prelimbic cortex ventral part
ipsi
PrLv
1.5
Infralimbic cortex
ipsi
IL
2
Infralimbic cortex superficial layers
ipsi
ILisL
-0.5
Infralimbic cortex layer 6
ipsi
ILL6
0
Infralimbic cortex intermediate layers
ipsi
ILiLim
-0.5
Infralimbic cortex rostral part
ipsi
ILR
-0.5
Frontal association cortex
ipsi
FrA
3
Frontal cortex area 2
ipsi
Fr2
2
Parietal association cortex
ipsi
PtA
1
Parietal cortex posterior area
ipsi
ParP
2
Parietal cortex ventral area
ipsi
ParV
0
Temporal cortex
ipsi
TE
1
Temporal association area 2 ventral part
ipsi
Te2V
-0.5
Auditory regions
ipsi
AU
1
Primary auditory cortex
ipsi
Au1
1
Ventral auditory areas
ipsi
AUDv
1
Insular cortex
ipsi
ICX
0
Agranular insular cortex dorsal part
ipsi
AID
1.5
Agranular insular cortex posterior part
ipsi
AIP
2
Agranular insular cortex ventral part
ipsi
AIV
2
Gustatory dysgranular insular cortex
ipsi
DIg
1
Granular insular cortex
ipsi
GI
1.5
Granular insular cortex posterior part
ipsi
GIpo
-2
Surrounding edges of the insular cortex
ipsi
ICXSE
-0.5
Perirhinal cortex
ipsi
A35
2.5
Perirhinal cortex anterior portion layer 3
ipsi
PRhaL3
3
Perirhinal cortex anterior portion layer 3 to layer 5
ipsi
PRhaL3L5
2
Perirhinal cortex anterior portion layer 5 to layer 6
ipsi
PRhaL5L6
3
Perirhinal cortex anterior portion layer 6
ipsi
PRhaL6
2
Ectorhinal cortex
ipsi
A36
2.5
Motoric regions
ipsi
M
4
Lateral prefrontal cortex
ipsi
lPFC
-1
Lateral agranular prefrontal cortex
ipsi
AGl
3
Lateral agranular prefrontal cortex layer 1
ipsi
AGlL1
1.5
Rostral part of lateral agranular prefrontal cortex
ipsi
AGlr
3
Whiskers motor cortex
ipsi
WMCx
-0.5
Medial prefrontal cortex
ipsi
mPFC
1
Medial agranular prefrontal cortex
ipsi
AGm
2
Medial agranular prefrontal cortex layer 5
ipsi
AGmL5
1.5
Medial agranular prefrontal cortex medial part
ipsi
mAGm
1.5
Medial agranular prefrontal cortex rostral part
ipsi
rAGm
3
Medial agranular cortex close to the cingulate cortex
ipsi
mPFCcCg
4
Sensory regions
ipsi
SR
-0.5
Primary somatosensory cortex
ipsi
S1
2
Primary somatosensory cortex barrel field
ipsi
S1BF
0
Secondary somatosensory cortex
ipsi
S2
2
Visual regions
ipsi
VR
1
Primary visual cortex
ipsi
V1
3
Primary visual cortex layer 6
ipsi
V1L6
1
Primary visual cortex layer 6 Tall pyramidal neuron
ipsi
V1L6TPN
-0.5
Secondary visual cortex
ipsi
V2
3
Secondary visual cortex medial area
ipsi
V2M
2
Secondary visual cortex medial area layer 3
ipsi
V2ML3
1.5
Secondary visual cortex medial area layer 5
ipsi
V2ML5
1
Secondary visual cortex medial area layer 6
ipsi
V2ML6
3
Secondary visual cortex medial area medial part
ipsi
V2MMe
3
Secondary visual cortex lateral area
ipsi
V2L
1
Primary visual cortex binocular area
ipsi
V1B
1
Intermediolateral cortical visual area
ipsi
VISli
1
Laterolateral cortical visual area
ipsi
VISll
-0.5
Mediolateral cortical visual area
ipsi
VISlm
1
Rostrolateral cortical visual area
ipsi
VISrl
1
Anteromedial cortical visual area
ipsi
VISam
2
Lateral part of anteromedial cortical visual area lower layers
ipsi
VISLamLo
1
Posterior part of the medial extrastriate cortex
ipsi
VISMP
3
Lateral orbital cortex
ipsi
LO
1
Medial orbital cortex
ipsi
MO
3
Ventral orbital cortex
ipsi
VO
2
Ventrolateral orbital area
ipsi
VLO
2.5
Accessory olfactory bulb
ipsi
AOB
0
Olfactory bulb A16
ipsi
MOB
0
Anterior olfactory nucleus
ipsi
AON
2
Key for weights
Value
Weight
-3
unknown
-2
fibers of passage
-1
not clear
-0.5
exists
0
not present
0.5
very light
1
light / sparse
1.5
light / moderate
2
moderate / dense
2.5
moderate / strong
3
strong
4
very strong
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