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Rat connectome



Dorsal raphe nucleus right


Abbreviation
DR
Color       
Superior regionsRaphe nuclei

SynonymsAbbr.Language
Dorsal nucleus of raphe Eng
Dorsal nucleus of the raphe Eng
B7 cell group  
Dorsal raphe  
Raphe dorsalisRD 
Dorsal raphe nucleusNRdEng
Dorsal raphe nucleusNRDEng
Fountain nucleus of Sheehan  
Fountain nucleus  
 DRNEng
Raphe dorsalis nucleus Eng
Dorsal raphe nucleusDREng
Fountain of Sheehan  
Nucleus raphe dorsalisRd 
Dorsal mesencephalic raphe nuclei Eng

SubregionsSide
Dorsal raphe nucleus caudal partright
Dorsal raphe nucleus central partright
Dorsal raphe nucleus dorsal partright
Dorsal raphe nucleus dorsolateral partright
Dorsal raphe nucleus dorsomedial subdivisionright
Dorsal raphe nucleus dorsomedian partright
Dorsal raphe nucleus interfascicular partright
Dorsal raphe nucleus intermediate partright
Dorsal raphe nucleus lateral partright
Dorsal raphe nucleus main partright
Dorsal raphe nucleus medial longitudinal fasciculus subdivisionright
Dorsal raphe nucleus medial partright
Dorsal raphe nucleus median partright
Dorsal raphe nucleus midline portionright
Dorsal raphe nucleus midrostrocaudal partright
Dorsal raphe nucleus pontine partright
Dorsal raphe nucleus rostral partright
Dorsal raphe nucleus rostrocaudal partright
Dorsal raphe nucleus ventral midlineright
Dorsal raphe nucleus ventral partright
Dorsal raphe nucleus ventrolateral partright
Dorsal raphe nucleus ventromedial subdivisionright
Dorsal raphe nucleus ventromedian partright
Neuropil of dorsal raphe nucleusright
Dorsal to the lateral wings of the dorsal rapheright
Dorsoventral extent of the dorsal raphe nucleusright
Dorsal raphe nucleus posterior partright
Dorsal raphe nucleus ventroposteriorright
Middle part of the dorsal raphe nucleusright
Dorsal raphe nucleus intermediolateral partright
Serotoninergic population of the dorsal raphe nucleusright
Nonserotoninergic population of the dorsal raphe nucleusright
Serotoninergic population of the region between the ventromedial dorsal raphe nucleus and dorsal to the media longitudianl fasciculusright
Serotoninergic population of the dorsal raphe nucleus ventral to the aqueductright
Nonserotoninergic population of the region between the ventromedial dorsal raphe nucleus and dorsal to the media longitudianl fasciculusright
Nonserotoninergic population of the dorsal raphe nucleus ventral to the aqueductright
Dorsal raphe nucleus subependymal stratumright
Dorsal raphe nucleus dorsocaudal partright
Mesencephalic portion of the dorsal raphe nucleusright
Dorsal raphe nucleus middle partright
Dorsal raphe nucleus ventromedial to interfascicular subdivisionright
Mid to rostral level of the dorsal raphe nucleusright
Dorsal raphe nucleus paramedian partright
Dorsal raphe nucleus mediolateral partright
Dorsal raphe nucleus fascicular regionright
Dorsal raphe nucleus midrostral partright
Dorsal raphe nucleus anterior poleright
Dorsal raphe nucleus around siteright

Output to

NameSideAbbr.WeightDetails
Medial longitudinal fasciculuscontramlf-2
Nuclei of the lateral lemniscuscontraNLL1
Periaqueductal graycontraPAG1
Lateral periaqueductal graycontraLPAG1
Periaqueductal gray medial partcontraPAGm1
Periaqueductal gray rostral partcontraPAGR-0.5
Ventrolateral periaqueductal graycontraVLPAG1.5
Red nucleuscontraR2
Superior colliculuscontraSC0.5
Intermediate gray layer of the superior colliculuscontraInG2
Central tegmental field dorsal partcontraTGACd0.5
Midbrain extrapyramidal areacontraMEA3
Substantia nigra A9contraSN1
Substantia nigra rostrocaudal partcontraSNrc-0.5
Ventral tegmental area A10contraVTA2
Ventral tegmental area A10 lateral partcontraVTAL3
Peripeduncular areacontraPPA1
Middle part of the retrorubral fieldcontraRRmi1
Ventrolateral tegmental areacontraVLTg1
Laterodorsal tegmental nucleuscontraLDTg2
Ventral tegmental nucleuscontraVTg1.5
Dorsal tegmental nucleuscontraDTg1.5
Pedunculopontine tegmental nucleuscontraPPTg3
ParaflocculuscontraPFl1
Ansiform lobule crus 2contraCrus21
Lateral cerebellar nucleuscontraCERL0
Locus coeruleuscontraLC3
Pericoerulear regioncontraPCR-0.5
Pontine tegmental fieldcontraPTF1
Prepositus nucleuscontraPr2
Medial reticular formation dorsal partcontraRFmD1
Mesencephalic reticular formationcontraMRF1
Pontine reticular nucleuscontraPRN1
Pontine reticular nucleus oral partcontraPnO1
Pontine reticular nucleus caudal partcontraPNC1
Parabrachial nucleuscontraPB4
Lateral parabrachial nucleuscontraLPB0.5
Gigantocellular reticular nucleuscontraGi1
Lateral reticular nucleuscontraLRt-0.5
Lateral reticular nucleus lateral partcontraLRtL1
Medullary reticular nucleuscontraMdD1
Medullary reticular nucleus dorsal partcontraMdDd1
Parvicellular reticular nucleuscontraPCRt1
Ambiguus nucleuscontraAmb-0.5
Area postremacontraAP3
Facial nucleuscontra7-0.5
Hypoglossal nucleuscontra12S-0.5
Juxtatrigeminal areacontraJx51
Mesencephalic trigeminal nucleuscontraMe53
Mesencephalic trigeminal nucleus rostral ponscontraMe5rp3
Motor trigeminal nucleuscontraMo5-0.5
Principal sensory trigeminal nucleuscontraPr5-0.5
Principal sensory trigeminal nucleus ventrolateral partcontraPr5VL1
Spinal trigeminal nucleus caudal partcontraSp5C2
Spinal trigeminal nucleus caudal part layer 3contraSp5CaL31
Spinal trigeminal nucleus caudal part layer 1contraSp5CaL11
Spinal trigeminal nucleus interpolar partcontraSp5I0.5
Spinal trigeminal nucleus oral partcontraSp5O0.5
Vestibular nucleicontraVnc-0.5
Nucleus of the solitary tractcontraSol-0.5
Raphe nucleicontraRAN1
Median raphe nucleuscontraMnR4
Raphe magnus nucleuscontraRMg1
Raphe pallidus nucleuscontraRPa2
Ventral lateral medulla oblongatacontraMVL2
Rostral ventrolateral medullacontraRVLM1
Mediaolateral part of the rostral ventrolateral medullacontraMLRVLM1
Lateral paragigantocellular nucleuscontraLPGi1
Paragigantocellular reticular nucleus rostroventral partcontraPGiRV1
Retrotrapezoid nucleuscontraRTN0.5
Basal forebraincontraBAF1.5
Nucleus of the horizontal limb of the diagonal bandcontraHDB0
Nucleus of the vertical limb of the diagonal bandcontraVDB0
Medial septal nucleuscontraMS0
Substantia innominatacontraSI0
Preoptic regioncontraPREO1
Magnocellular preoptic nucleuscontraMCPO1
Medial preoptic nucleuscontraMPO0.5
Tuberomammillary nucleus dorsomedial partcontraTBMdm0.5
Ventral tuberomammillary nucleuscontraVTM0.5
Glia limitans ventral to the ventral tuberomammillary nucleuscontraTuMgL0.5
Dorsomedial hypothalamic nucleuscontraDMHy0.5
Posterior region [Lateral division of the hypothalamus]contraPReg1
Lateral zonecontraLHA-0.5
Lateral hypothalamic areacontraLH-0.5
Dorsolateral hypothalamuscontraDLH1.5
Lateral hypothalamus adjacent to the ventral tuberomammillary nucleuscontraLHVTM0.5
Dorsomedial hypothalamic nucleus [Medial zone]contraDM-0.5
Posterior hypothalamic nucleuscontraPH3
Ventromedial hypothalamic nucleuscontraVMH2
Anteroventral periventricular nucleus 2contraAVPV20.5
Arcuate nucleuscontraArc0.5
Paraventricular hypothalamic nucleuscontraPa-0.5
Paraventricular hypothalamic nucleus parvocellular divisioncontraPavPo-0.5
Supraoptic nucleus dorsal partcontraSOd-0.5
Supraoptic nucleus ventral part [Supraoptic region]contraSOV-0.5
Mammillary bodycontraCMAM-0.5
Lateral mammillary nucleuscontraLM0.5
Premammillary nucleus dorsal partcontraPMD0.5
Premammillary nucleus ventromedial partcontraPMvm0.5
Supramammillar nucleuscontraSuM-0.5
Supramammillar nucleus lateral partcontraSuML0.5
Supramammillary decussationcontrasumx-0.5
A8 dopamine cells retrorubral groupcontraRRF3
A8 dopamine cells retrorubral group lateral partcontraRRFL1
A8 dopamine cells retrorubral group medial partcontraRRFm1.5
Anterior group of the dorsal thalamuscontraATN-0.5
Anterodorsal thalamic nucleuscontraAD2
Anteroventral thalamic nucleuscontraAV2
Central medial thalamic nucleuscontraCM1
Centrolateral thalamic nucleuscontraCL3
Paracentral thalamic nucleuscontraPC1
Parafascicular thalamic nucleuscontraPF3
Posterior thalamic nuclear groupcontraPo1
Medial group of the dorsal thalamuscontraMED1
Mediodorsal thalamic nucleuscontraMD1
Mediodorsal thalamic nucleus medial partcontraMDM3
Submedius thalamic nucleuscontraSub1.5
Ventrobasal complexcontraVB1
Ventromedial thalamic nucleus caudal partcontraVMc1
Ventromedial thalamic nucleus caudal two thirdscontraVMctt1
Lateral posterior thalamic nucleuscontraLP1
Laterodorsal thalamic nucleuscontraLD1
Reticular thalamic nucleuscontraRt1
Subparafascicular thalamic nucleus caudal partcontraSPFc0.5
Subparafascicular thalamic nucleus medial partcontraSPFme0.5
Subparafascicular thalamic nucleus rostral partcontraSPFr0.5
Ventral thalamus dorsomedial partcontraVNTdm2
Zona incertacontraZI0
HabenulacontraHAB1
Lateral habenular nucleus medial partcontraLHbM3
Pretectal regioncontraPRT1
Amygdaloid complexcontraAC-0.5
Basal dorsal nucleus medial partcontraBDM0.5
Basal nucleus ventral divisoncontraBncV-0.5
Basolateral amygdaloid nucleuscontraBL1
Bed nucleus of the stria terminalis lateral divisioncontraBSTL-0.5
Bed nucleus of the stria terminalis medial divisioncontraBSTM-0.5
Central amygdaloid nucleuscontraCe0.5
Dorsal area of posterior part of cortical amygdaloid nucleuscontraCAnDP0.5
Medial amygdaloid nucleuscontraMe-0.5
Medial amygdaloid nucleus dorsal tipcontraMeDT0.5
Globus palliduscontraGP1
Lateral globus palliduscontraLGP0
Medial globus palliduscontraMGP0.5
Ventral pallidumcontraVP1
Accumbens nucleuscontraAc1
Accumbens nucleus corecontraAcbC2
Lateral accumbens shellcontraAcbShl2
Medial accumbens shellcontraAcbShm2
Caudate putamencontraCPu3
Subthalamic nucleuscontraSTh0.5
Dorsal hippocampuscontraHIPPd0.5
Field CA3 of hippocampuscontraCA3-0.5
SubiculumcontraS2
Ventral hippocampuscontraHIPPv-0.5
PresubiculumcontraPrS2
ParasubiculumcontraPaS1
Entorhinal cortexcontraEnt1
Lateral entorhinal cortexcontraLEnt-0.5
Medial entorhinal cortexcontraMEnt2
Piriform cortexcontraPir-0.5
Anterior piriform cortexcontraAPIRC0.5
Posterior piriform cortexcontraPPIRC0.5
Retrosplenial agranular cortexcontraRSA2
Cingulate cortexcontraCg2
Anterior cingulate cortexcontraACC2
Prelimbic cortexcontraPrL2
Infralimbic cortexcontraIL2
Auditory regionscontraAU3
Agranular insular cortexcontraAI1
Jaw movement motor cortexcontraJMCx1
Medial prefrontal cortexcontramPFC1
Medial agranular prefrontal cortexcontraAGm2
Sensory regionscontraSR1
Visual regionscontraVR1
Primary visual cortexcontraV11
Ventrolateral orbital areacontraVLO-0.5
Ventrolateral orbital area layerscontraVLOL3
Lateral geniculate complexcontraLG1
Ventral lateral geniculate nucleuscontraVLG2
Dorsal portion of the lateral geniculate complexcontraLGD-0.5
Olfactory bulb A16contraMOB-0.5
Olfactory cortex plexiform layercontraOcxLpx1
Septal regioncontraSER2
Lateral septal nucleuscontraLS0.5
Cervical segment 7contraCS7-1
Thoracal segment 1contraT13
Thoracal segment 2contraT23
Thoracal segment 3contraT33
Thoracal segment 4contraT43
Thoracal segment 6contraT61
Intermediomedial cell column L1contraIMML11
Intermediomedial cell column L2contraIMML21
Intermediomedial cell column L3contraIMML31
Intermediomedial cell column L4contraIMML41
Intermediomedial cell column L5contraIMML51
Intermediomedial cell column L6contraIMML61
Dura materipsidura3
Central gray medial partipsiCGMe2
Central gray mesencephalic partipsiCGM-0.5
Central gray mesencephalic part ventromedial partipsiCGMvm-0.5
Central gray pons partipsiCGP-0.5
Fasciculus retroflexusipsifr-2
Medial longitudinal fasciculusipsimlf-2
Nuclei of the lateral lemniscusipsiNLL1
Nucleus of DarkschewitschipsiDk-0.5
Oculomotor nucleusipsi3-0.5
Rostral interstitial nucleus of medial longitudinal fasciculusipsiRI0
Periaqueductal grayipsiPAG2
Dorsal periaqueductal grayipsiDPAG-0.5
Dorsomedial periaqueductal grayipsiDMPAG1
Lateral periaqueductal grayipsiLPAG1
Periaqueductal gray rostral dorsal partipsiPAGdr1
Periaqueductal gray medial partipsiPAGm1
Periaqueductal gray rostral partipsiPAGR-0.5
Periaqueductal gray rostrolateral partipsiPAGRL-0.5
Ventrolateral periaqueductal grayipsiVLPAG3
Lateral retrofacial region of the periaqueductal grayipsiLRFPAG-0.5
Periventricular gray matteripsiPVG1
Red nucleusipsiR2
Prerubral fieldipsiPR2
Inferior colliculusipsiICOL3
Superior colliculusipsiSC1
Superior colliculus superficial layersipsiSCs-0.5
Superior colliculus intermediate and deep layersipsiSCidLa-0.5
Superior colliculus intermediate layersipsiSCi-0.5
Intermediate gray layer of the superior colliculusipsiInG3
Tegmental areaipsiTGA2
Central tegmental field dorsal partipsiTGACd1
Mesopontine tegmental area caudal partipsiTGAmc1.5
Mesopontine tegmental area mid-levelipsiTGAmm1.5
Mesopontine tegmental area rostral partipsiTGAmr1.5
Midbrain extrapyramidal areaipsiMEA3
Peduncularpontine nucleusipsiPPN-0.5
Peduncularpontine nucleus caudal levelsipsiPPNCa-0.5
Pars compacta nucleus pedunculopontinusipsiPPNpc1
Posterodorsal tegmental nucleusipsiPDTg-2
Rostromedial tegmental nucleusipsiRMTg1
Ventral midbrain tegmentumipsiVeMT-0.5
Substantia nigra A9ipsiSN4
Substantia nigra caudal partipsiSNcp3
Substantia nigra compact partipsiSNC2
Substantia nigra compact part dorsal tieripsiSNCD2
Substantia nigra medial partipsiSNM-0.5
Substantia nigra reticular partipsiSNR2
Substantia nigra rostrocaudal partipsiSNrc-0.5
Substantia nigra ventral partipsiSNv1
Ventral tegmental area A10ipsiVTA4
Ventral tegmental area A10 lateral partipsiVTAL3
Interfascicular nucleusipsiIF1
Ventral tegmental area rostral ventromedial partipsiVTARVM-0.5
Parabrachial pigmented nucleus rostrolateral partipsiPBPRL2
Parabrachial pigmented nucleus caudal partipsiPBPC2
Paranigral nucleusipsiPN2
Caudal linear nucleus of the rapheipsiCLi3
Peripeduncular areaipsiPPA1
Middle part of the retrorubral fieldipsiRRmi2
Ventrolateral tegmental areaipsiVLTg1
Lateral tegmental field retroambigual areaipsiLTfr1
Laterodorsal tegmental nucleusipsiLDTg2.5
Paramedian tegmentumipsiParaTeg3
Ventral tegmental nucleusipsiVTg3
Dorsal tegmental nucleusipsiDTg2.5
Dorsal tegmental nucleus central partipsiDTgC1
Dorsal tegmental nucleus lateral partipsiDLTN-0.5
Pedunculopontine tegmental nucleusipsiPPTg4
Pedunculopontine tegmental nucleus caudal partipsiPPTgC1.5
Pedunculopontine tegmental nucleus mid levelipsiPPTgmL2.5
Pedunculopontine tegmental nucleus pars dissipataipsiPPNd1
Pedunculopontine tegmental nucleus rostral partipsiPPTgR1.5
Rostral mesopontine tegmental anesthesia areaipsiRMTGA2
Mid-level mesopontine tegmental anesthesia areaipsiMLMTGA2
Caudal mesopontine tegmental anesthesia areaipsiCMTGA2
Pontine wave generation siteipsiPWGS2
Edinger Westphal nucleusipsiEW2
Interstitial nucleus of CajalipsiInC-0.5
CerebellumipsiCERE1
ParaflocculusipsiPFl2
Paraflocculus ventral partipsiPFlv2
Ansiform lobule crus 2ipsiCrus22
Cerebellar lobule 9ipsiCERL91
Anterior interposed nucleusipsiAIN0
Lateral cerebellar nucleusipsiCERL1
FlocculusipsiFl2
Barringtons nucleusipsiBar2
Locus coeruleusipsiLC3
Locus coeruleus anterior partipsiLCa3
Locus coeruleus caudal partipsiLCca3
Locus coeruleus caudal part ventral partipsiLCcV-2
Locus coeruleus coreipsiLCco1
Locus coeruleus dorsomedial partipsiLCdm3
Locus coeruleus middle partipsiLCmi3
Locus coeruleus posterior partipsiLCp1
Locus coeruleus ventrolateral partipsiLCvL3
Pericoerulear regionipsiPCR3
Caudal juxtaependymal pericoerulear regionipsiCJEPCR-0.5
Rostromedial pericoerulear regionipsiRMPCR-0.5
Prelocus coeruleus nucleusipsiPLC1
Nucleus incertus pars compactaipsiNIc2
Nucleus incertus pars dissipataipsiNId-3
Pons oral partipsiPor-0.5
Pontine sublaterodorsal nucleusipsiPsLdn1
Pontine tegmental fieldipsiPTF1
Prepositus nucleusipsiPr2
Medial reticular formationipsiRFm3
Medial reticular formation dorsal partipsiRFmD3
Mesencephalic reticular formationipsiMRF1.5
Deep mesencephalic nucleus dorsal partipsiDpMeD2
Anterior mesencephalic reticular formationipsiAMRF-0.5
Laterodorsal portions of the midbrain reticular formationipsiMRFLd4
Pontine reticular nucleusipsiPRN3
Pontine reticular nucleus central partipsiNRTPc-0.5
Pontine reticular nucleus oral partipsiPnO1
Subcoerulear areaipsiSCoe-0.5
Pontine reticular nucleus caudal partipsiPNC1
Cuneiforme nucleusipsiCnF-0.5
Parabrachial nucleusipsiPB4
Lateral parabrachial nucleusipsiLPB1
Lateral parabrachial nucleus dorsolateral partipsiLPBdL-0.5
Lateral parabrachial nucleus external lateral partipsiLPBEL-0.5
Lateral parabrachial nucleus ventrolateral partipsiLPBVL-0.5
Parabrachial nucleus lateral division central lateral partipsiPBLCL-0.5
Parabrachial nucleus medialipsiPBnMe1
Gigantocellular reticular nucleusipsiGi3
Gigantocellular reticular nucleus alpha partipsiGiA3
Lateral reticular nucleusipsiLRt2
Lateral reticular nucleus lateral partipsiLRtL3
Medullary reticular nucleusipsiMdD3
Medullary reticular nucleus dorsal partipsiMdDd2
Parvicellular reticular nucleusipsiPCRt3
Subcoeruleus nucleusipsiSubC-2
Supragenual nucleusipsiSGe3
Ambiguus nucleusipsiAmb-0.5
Area postremaipsiAP3
Boetzinger complexipsiBo3
Facial nucleusipsi71
Hypoglossal nucleusipsi12S1
Juxtatrigeminal areaipsiJx53
Supratrigeminal nucleusipsiSu51
Mesencephalic trigeminal nucleusipsiMe53
Mesencephalic trigeminal nucleus medial partipsiperiMe52
Mesencephalic trigeminal nucleus rostral ponsipsiMe5rp3
Pontine part of the mesencephalic trigeminal nucleusipsiMe5P-0.5
Motor trigeminal nucleusipsiMo53
Motor trigeminal nucleus dorsolateral partipsiMo5DL3
Principal sensory trigeminal nucleusipsiPr53
Principal sensory trigeminal nucleus ventrolateral partipsiPr5VL3
Spinal trigeminal nucleusipsiSp5nc2.5
Spinal trigeminal nucleus caudal partipsiSp5C3
Spinal trigeminal nucleus caudal part layer 3ipsiSp5CaL33
Spinal trigeminal nucleus caudal part layer 1ipsiSp5CaL13
Spinal trigeminal nucleus interpolar partipsiSp5I2
Spinal trigeminal nucleus oral partipsiSp5O2
Trigeminal subnucleus caudalisipsi5SSC0
Cochlear nucleusipsiCON3
Dorsal cochlear nucleusipsiDC-0.5
Vestibular nucleiipsiVnc-0.5
Superior vestibular nucleusipsiSuVe3
Ventral aspect of the caudal superior vestibular nucleusipsiSuVecaV-0.5
Superior vestibular nucleus rostral poleipsiSuVeR3
Medial vestibular nucleusipsiMVe1
Medial vestibular nucleus caudal partipsiMVeP0.5
Medial vestibular nucleus lateral partipsiMVeL3
Medial vestibular nucleus medial partipsiMVeM1
Medial vestibular nucleus rostrodorsal partipsiMVeRD-0.5
Medial vestibular nucleus ventral partipsiMVeV1
Periventricular region of the medial vestibular nucleusipsiMVePv-0.5
Lateral vestibular nucleus caudal partipsiLVeCa-0.5
Lateral vestibular nucleus rostral partipsiLVeR-0.5
Inferior vestibular nucleusipsiIVN0.5
Rostrodorsal vestibular nuclear complexipsiVncpRD-0.5
Caudoventral vestibular nuclear complecipsiVncpCV-0.5
Nucleus of the solitary tractipsiSol-0.5
Nucleus of the solitary tract caudal partipsiSolca1
Nucleus of the solitary tract commissural partipsiSolC-0.5
Nucleus of the solitary tract lateral partipsiSolL1
Nucleus of the solitary tract medial partipsiSolM-0.5
Nucleus of the solitary tract adjacent to the nucleus nervi vagiipsiSola101
Parvicellular nucleus of the nucleus of the solitary tractipsiSolpar-0.5
Dorsal motor nucleus of vagusipsi101
Raphe nucleiipsiRAN3
Dorsal raphe nucleusipsiDR-0.5
Dorsal raphe nucleus lateral wingipsiDRlw2
Linear nucleus of the rapheipsiLIR-0.5
Rostral linear nucleus of the rapheipsiRLi-0.5
Median raphe nucleusipsiMnR4
Superior central raphe nucleusipsiCS3
Raphe magnus nucleusipsiRMg3
Raphe magnus nucleus dorsal partipsiDRMg-0.5
Raphe obscurus nucleusipsiROb3
Raphe pallidus nucleusipsiRPa1
Ventral lateral medulla oblongataipsiMVL1
Caudal ventrolateral medulla lateral partipsiCVLMl1
Rostral ventrolateral medullaipsiRVLM3
Mediaolateral part of the rostral ventrolateral medullaipsiMLRVLM3
Inferior oliveipsiIO-0.5
Paragigantocellular reticular nucleusipsiPGi-0.5
Lateral paragigantocellular nucleusipsiLPGi3
Paragigantocellular reticular nucleus medial partipsiPGiM1
Paragigantocellular reticular nucleus rostroventral partipsiPGiRV3
Retrotrapezoid nucleusipsiRTN1
Rostral ventral respiratory groupipsiRVRG0
Choroidea innervating part of the superior salivatory nucleusipsiCSSN0.5
Sympathoexitatory area rostral to ventrolateral medulla ipsiMeObSe1
ProsencephalonipsiPRC-0.5
Basal forebrainipsiBAF2
Median eminenceipsiME1.5
Endopiriform systemipsiEnN-0.5
Dorsal endopiriform nucleusipsiDEn-0.5
Islands of CallejaipsiICj3
Diagonal band of BrocaipsiDBB2
Nucleus of the horizontal limb of the diagonal bandipsiHDB4
Nucleus of the vertical limb of the diagonal bandipsiVDB3
Medial septal nucleusipsiMS3
Medial septal nucleus lateral partipsiMSLa1
Basal nucleus MeynertipsiB4
Substantia innominataipsiSI3
Substantia innominata anterior partipsiSIA2
Substantia innominata dorsal partipsiSID1
Substantia innominata posterior partipsiSIP3
Preoptic regionipsiPREO3
Lateral preoptic areaipsiLPO3
Medial preoptic areaipsiMPA3
Magnocellular preoptic nucleusipsiMCPO4
Medial preoptic nucleusipsiMPO3
Medial preoptic nucleus lateral partipsiMPOL3
Ventrolateral preoptic nucleusipsiVLPO-0.5
Tuberomammillary nucleusipsiTuM2
Tuberomammillary nucleus dorsomedial partipsiTBMdm3
Ventral tuberomammillary nucleusipsiVTM3
Glia limitans ventral to the ventral tuberomammillary nucleusipsiTuMgL3
Subcommissural organipsiSCO-0.5
Hypendymal layer of the subcommissural organ lateral partipsiSCOhLL-0.5
Vascular organ of the lamina terminalisipsiVOLT-0.5
Dorsomedial hypothalamic nucleusipsiDMHy3
Posterior region [Lateral division of the hypothalamus]ipsiPReg1
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0.5
Lateral zoneipsiLHA3
Lateral hypothalamic areaipsiLH3
Dorsolateral hypothalamusipsiDLH3
Lateral hypothalamic area anterior partipsiLHAa2
Lateral hypothalamic area juxtadorsomedial regionipsiJDM0.5
Lateral hypothalamic area lateral partipsiLHAL-0.5
Lateral hypothalamic area medial partipsiLHAm1.5
Lateral hypothalamic area motor related juxtaventromedial region dorsal zoneipsiLHAjvd0.5
Lateral hypothalamic area motor related juxtaventromedial region ventral zoneipsiLHAjvv0
Lateral hypothalamic area perifornical partipsiPFx4
Lateral hypothalamic area posterior partipsiLHAp3
Tuberal region of lateral hypothalamusipsiTuLH2
Lateral hypothalamic area [Lateral zone tuberal level]ipsiLHtu0.5
Posterolateral hypothalamusipsiPLHY-1
Lateral hypothalamus adjacent to the ventral tuberomammillary nucleusipsiLHVTM3
Medial division of the hypothalamusipsiMdH1
Medial preoptic anterior regionipsiMPAr2
Medial zoneipsiMHA0
Anterior hypothalamic areaipsiAHA3
Anteroventral periventricular nucleus [Anterior hypothalamic area]ipsiAVPe0
Anterior hypothalamic nucleusipsiAHn1.5
Dorsal hypothalamic areaipsiDA2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Posterior hypothalamic areaipsiPHA2.5
Midlateral posterior hypothalamic areaipsiPHAmL-0.5
Posterior hypothalamic nucleusipsiPH3
Subparaventricular zoneipsiSuPZ-0.5
Tuberal areaipsiTA2
Ventromedial hypothalamic nucleusipsiVMH3
Ventromedial hypothalamic nucleus central partipsiVMHC0.5
Ventromedial hypothalamic nucleus shellipsiVMS0
Mediobasal hypothalamus anterior partipsiMeHypoAnt0.5
Mediobasal hypothalamus posterior partipsiMeHypoP0.5
Periventricular zoneipsiPVZ-0.5
Anteroventral periventricular nucleus 2ipsiAVPV20.5
Arcuate nucleusipsiArc2
Arcuate nucleus caudal halfipsiArcch1
Nucleus paraventricularis [Periventricular zone anterior region]ipsiPaPAR0
Paraventricular hypothalamic nucleus lateral magnocellular part [Periventricular zone anterior region]ipsiPaLM3
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]ipsiPaMP3
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAP2
Paraventricular nucleus of the hypothalamus magnocellular division medial magnocellular partipsiPaAMm3
Paraventricular hypothalamic nucleusipsiPa3
Paraventricular hypothalamic nucleus magnocellular division between PaLM and PaAMmipsiPaMagb3
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo1
Paraventricular hypothalamic nucleus parvocellular division posterior partipsiPavPoP3
Paraventricular nucleus medial partipsiPame-0.5
Paraventricular hypothalamic nucleus dorsomedial capipsiPadmc3
Dorsal area surrounding the caudal level of the paraventricular hypothalamic nucleusipsiPaDsCa1
Ventral perinuclear paraventricular hypothalamic areaipsiPPaV2
Paraventricular hypothalamic nucleus surrounding regionipsiPaSurr0.5
Periventricular hypothalamic nucleusipsiPe1
Periventricular hypothalamic nucleus parvicellular partipsiPepcp-0.5
Suprachiasmatic nucleusipsiSCh3
Suprachiasmatic nucleus ventral divisionipsiSChv2
Rostral part of suprachiasmatic nucleus ventrolateral partipsiSCnVLR2
Suprachiasmatic nucleus medial posterior partipsiSChmp-0.5
Supraoptic nucleus [Supraoptic region]ipsiSO2
Nucleus properipsiSOnP-0.5
Supraoptic nucleus dorsal partipsiSOd-0.5
Supraoptic nucleus ventral part [Supraoptic region]ipsiSOV2
Mammillary bodyipsiCMAM1
Lateral mammillary nucleusipsiLM3
Mammillary peduncleipsimp-2
Mammillotegmental tractipsimtg-2
Mammillothalamic tractipsimt-2
Medial mammillary nucleusipsiMMn1.5
Medial mammillary nucleus lateral partipsiML2
Medial mammillary nucleus medial partipsiMM2
Lateral part of pars medialis of the medial mammillary nucleusipsiMLM-0.5
Medial mammillary nucleus posterior partipsiMMNp-0.5
Posterior mammillay nucleusipsiPMAM2
Premammillary nucleusipsiPMAN1.5
Premammillary nucleus dorsal partipsiPMD3
Premammillary nucleus ventral partipsiPMV0.5
Premammillary nucleus ventromedial partipsiPMvm3
Premammillary nucleus superficial partipsiPMANS-0.5
Supramammillar nucleusipsiSuM3
Supramammillar nucleus lateral partipsiSuML3
Supramammillar nucleus medial partipsiSuMM0
Supramammillary decussationipsisumx-2
A8 dopamine cells retrorubral groupipsiRRF3
A8 dopamine cells retrorubral group lateral partipsiRRFL2
A8 dopamine cells retrorubral group medial partipsiRRFm3
Perifornical nucleusipsiPeF3
Retrochiasmatic areaipsiRCh2
Supraoculomotor capipsiSu3C-0.5
ThalamusipsiT-0.5
Anterodorsal thalamic nucleusipsiAD2
Anteromedial thalamic nucleusipsiAM-0.5
Anteroventral thalamic nucleusipsiAV3
Interoanteromedial thalamic nucleusipsiIAM-0.5
Dorsal thalamus periventricular strataipsiDORps-0.5
Intralaminar nuclei of the dorsal thalamusipsiILM2.5
Central medial thalamic nucleusipsiCM1
Central medial thalamic nucleus lateral partipsiCMl1
Centre median nucleusipsiCeMe0
Centrolateral thalamic nucleusipsiCL3
Paracentral thalamic nucleusipsiPC2
Parafascicular thalamic nucleusipsiPF3
Parafascicular thalamic nucleus lateral partipsiPFL0.5
Rhomboid thalamic nucleusipsiRh1.5
Posterior thalamic nuclear groupipsiPo2
Posterior thalamic nuclear group medial partipsiPoMe1
Medial group of the dorsal thalamusipsiMED1
Mediodorsal thalamic nucleusipsiMD3
Mediodorsal thalamic nucleus lateral partipsiMDL1.5
Mediodorsal thalamic nucleus medial partipsiMDM3
Submedius thalamic nucleusipsiSub3
Midline group of the dorsal thalamusipsiMTN2
Paratenial thalamic nucleusipsiPT2
Paraventricular thalamic nucleusipsiPV2
Paraventricular thalamic nucleus anterior partipsiPVA-0.5
Paraventricular thalamic nucleus middle divisionipsiPVMiD2
Paraventricular thalamic nucleus posterior partipsiPVP2
Reuniens thalamic nucleusipsiRe2
Reuniens thalamic nucleus caudomedial divisionipsiRecm2
Reunienes thalamic nucleus rostromedial divisionipsiRerm2
Reuniens thalamic nucleus rostrolateral divisionipsiRerl2
Subfascicular nucleusipsiSFN-0.5
Subfornical organipsiSFO3
Central core of the subfornical organipsiSFOC3
Peripheral region of the subfornical organipsiSFOP-0.5
Ventrolateral thalamic nucleusipsiVL2
Ventral posterior thalamic complexipsiVPT1
Ventrobasal complexipsiVB1
Ventral posterolateral thalamic nucleusipsiVPL3
Ventral posterolateral thalamic nucleus anterior partipsiVPLA2
Ventral posteromedial thalamic nucleusipsiVPM3
Ventral posteromedial thalamic nucleus anterior partipsiVPMA2
Ventromedial thalamic nucleusipsiVM2
Ventromedial thalamic nucleus caudal partipsiVMc1
Ventromedial thalamic nucleus caudal two thirdsipsiVMctt1
Intralaminar nucleiipsiILN2
Lateral thalamic nuclear groupipsiLTNG1
Lateral posterior thalamic nucleusipsiLP3
Laterodorsal thalamic nucleusipsiLD2
Ventrolateral part of the lateral thalamic nuclear groupipsiVLLTNG1
Ventroposterior lateral thalamic nucleusipsiVPLTNG1
Anterior medial thalamic nucleusipsiAMTZ-0.5
Posterior groupipsiPTG2.5
Posteromedial thalamic nucleusipsiPMTN1
Ventral thalamusipsiVNT1
Reticular thalamic nucleusipsiRt3
Reticular thalamic nucleus dorsal partipsiRtD1
Reticular thalamic nucleus rostral partipsiRtr-10
Reticular thalamic nucleus ventral partipsiRtV2
Subparafascicular thalamic nucleusipsiSPF-0.5
Subparafascicular thalamic nucleus caudal partipsiSPFc1
Subparafascicular thalamic nucleus medial partipsiSPFme1
Subparafascicular thalamic nucleus rostral partipsiSPFr1
Ventral thalamus dorsomedial partipsiVNTdm3
Basal portion of the ventral complex of thalamic nucleiipsiBVNT-0.5
Zona incertaipsiZI3
Nucleus of the fields of ForelipsiF-0.5
Forel field H1ipsiFFH11
Forel field H2ipsiFFH2-0.5
Zona incerta dorsal partipsiZID-0.5
Nucleus of the optic tract basalisipsiOTba-0.5
HabenulaipsiHAB2
Lateral habenular nucleusipsiLHb3
Lateral habenular nucleus lateral partipsiLHbL-0.5
Lateral habenular nucleus medial partipsiLHbM3
Medial habenular nucleusipsiMHb2
Medial habenular nucleus rostral partipsiMHbr-0.5
Pretectal regionipsiPRT2
Deep pineal glandipsiDPi3
Superficial pineal glandipsiSPi0
Ansa lenticularisipsial-2
Lateral portion of the internal capsuleipsiLic2
Medial forebrain bundleipsimfb-2
Stria medullaris of the thalamusipsism1
Medial corticothalamic tractipsimctt-2
Lateral corticohypothalamic tractipsilcht-2
Septal hypothalamic tractipsiseht-2
Fasciculus periventricularis hypothalamicusipsifpvh-2
Tractus olfactohabenularis lateralisipsitohal-0.5
Tuberculohypothalamic tractipsithyt-2
Raphe medial tractipsirmt-2
Dorsal raphe cortical tractipsidrct-2
Dorsal raphe arcuate tractipsidrat-2
Supraoptic commissural fibersipsisocf-2
Dorsal raphe periventricular tractipsidrpvt-2
RetinaipsiRET-0.5
Dorsal bank of the anterior portion of the rhinal fissureipsidarf1
Amygdaloid complexipsiAC3
Basal nucleusipsiBnc-0.5
Basal dorsal nucleus medial partipsiBDM2
Basal nucleus ventral divisonipsiBncV-0.5
Basolateral amygdaloid nucleusipsiBL2
Anterior basolateral nucleusipsiBLA0.5
Basomedial amygdaloid nucleusipsiBM2
Lateral amygdaloid nucleusipsiLA3
Bed nucleus of the stria terminalisipsiBST2.5
Bed nucleus of the stria terminalis caudal part caudoventral regionipsiBSTCacv1
Bed nucleus of the stria terminalis caudal part perifornical regionipsiBSTCapf1
Bed nucleus of the stria terminalis dorsolateral partipsiBSTDL3
Bed nucleus of the stria terminalis lateral divisionipsiBSTL3
Bed nucleus of the stria terminalis lateral division dorsal partipsiBSTLD-0.5
Bed nucleus of the stria terminalis lateral division juxtacapsular partipsiBSTLJ3
Bed nucleus of the stria terminalis lateral division ventral partipsiBSTLV1
Bed nucleus of the stria terminalis medial divisionipsiBSTM2
Bed nucleus of the stria terminalis medial division anterior partipsiBSTMA3
Bed nucleus of the stria terminalis medial division posterior partipsiBSTMP3
Bed nucleus of the stria terminalis dorsal nucleusipsiBSTd-0.5
Bed nucleus of the stria terminalis posterior division ventral nucleusipsiBSTV-0.5
Bed nucleus of the stria terminalis ventral partipsiBNSTv3
Bed nucleus of the stria terminalis ventral lateral partipsiBNSTvL3
Interstitial nucleus of the stria terminalisipsiBSTis3
Central extended amygdala groupipsiCEXA-0.5
Central amygdaloid nucleusipsiCe3
Central amygdaloid nucleus lateral divisionipsiCeL-1
Central amygdaloid nucleus medial divisionipsiCeM1
Interstitial nucleus of the posterior limb of the anterior commissureipsiIPAC2
Interstitial nucleus of the posterior limb of the anterior commissure medial partipsiIPACM2
Sublenticular extended amygdalaipsiSLEA3
Central division of sublenticular extended amygdalaipsiSLEAc-0.5
Medial division of the sublenticular extended amygdalaipsiSLEAm-0.5
Olfactory amygdalaipsiOA-0.5
Amygdalopiriform transition areaipsiAPir3
Anterior amygdaloid areaipsiAA-0.5
Anterior amygdaloid area dorsal partipsiAAD3
Cortical amygdaloid nucleusipsiCAn-0.5
Anterior cortical amygdaloid nucleusipsiACo2
Corticomedial amygdaloid nucleusipsiCMAn-0.5
Dorsal area of posterior part of cortical amygdaloid nucleusipsiCAnDP2
Posterior amygdaloid nucleusipsiCOAp1
Periamygdaloid complexipsiPAC2
Medial amygdaloid nucleusipsiMe3
Medial amygdaloid nucleus dorsal tipipsiMeDT2
Amygdalohippocampal areaipsiAHi2
Posteromedial cortical nucleusipsiPMCo-0.5
Intercalated nuclei of the amygdalaipsiI2
Rostral part of claustrumipsiRCl2
Globus pallidusipsiGP4
Globus pallidus mediodorsal partipsiGPmd3
Lateral globus pallidusipsiLGP2
Medial globus pallidusipsiMGP2
Ventral pallidumipsiVP3
Ventral pallidum ventromedial partipsiVPvm1
StriatumipsiSTR3
Accumbens nucleusipsiAc3
Accumbens nucleus coreipsiAcbC3
Accumbens nucleus shellipsiAcbSh2
Dorsomedial shellipsiAcbShdm-0.5
Lateral accumbens shellipsiAcbShl2
Medial accumbens shellipsiAcbShm2
Dorsal tip of the dorsomedial accumbens nucleusipsiACBdmt-0.5
Lateral nucleus accumbensipsiAcl2
Caudate putamenipsiCPu3
Anterodorsal part of the caudate putamenipsiCPuAD3
Anteromedial striatumipsiCPuam3
Medial striatumipsiCPum1.5
Caudal striatumipsiCPuc2
Caudalmost striatumipsiCPucmo-0.5
Caudate putamen caudolateral partipsiCPucl-0.5
Dorsal striatumipsiCPud3
Dorsolateral striatumipsiCPudl-0.5
Dorsolateral striatum dorsal partipsiCPudlD0.5
Rostral striatumipsiCPur1
Ventral striatumipsiCPuv2.5
Ventrolateral striatumipsiCPuvl-0.5
Ventromedial striatumipsiCPuvm3
Jaw region of the striatumipsiCPuJaw3
Medial portion of the middle-third of the caudate putamenipsiCPuMitM-0.5
Ventral portion of the middle-third of the caudate putamenipsiCPuMitV-0.5
Lateral striatumipsiCPul2
Tail of the striatumipsiCPuTa-0.5
Subthalamic nucleusipsiSTh4
Parasubthalamic nucleusipsiPSTh3
Cerebral cortexipsiCEC3
HippocampusipsiHIPP3
Dorsal hippocampusipsiHIPPd1
Dentate gyrusipsiDG3
Dentate gyrus molecular layeripsiDGmL-0.5
Granule cell layer of the dentate gyrusipsiDGgL-0.5
Field CA1 of hippocampusipsiCA12
Field CA1 of hippocampus dorsalipsiCA1d1
Field CA3 of hippocampusipsiCA31
SubiculumipsiS2
Subiculum ventral partipsiSv-0.5
Posterior hippocampusipsiHIPPpo-0.5
Septohippocampal nucleusipsiSHi3
Septohippocampal nucleus anterior partipsiSHia2
Ventral hippocampusipsiHIPPv1
Fasciola cinereumipsiFC-2
Fornixipsif-2
Indusium griseumipsiIG-0.5
PresubiculumipsiPrS2
ParasubiculumipsiPaS-0.5
Entorhinal cortexipsiEnt-0.5
Lateral entorhinal cortexipsiLEnt-0.5
Lateral entorhinal cortex ventral partipsiVLEA2
Lateral entorhinal cortex ventromedial partipsiVMEAL1
Medial entorhinal cortexipsiMEnt3
Medial entorhinal cortex layer 3ipsiMEntLyL31
Piriform cortexipsiPir2
Retrosplenial cortex middle part layer 1ipsiRSmiL1-0.5
Retrosplenial cortex middle part layer 2ipsiRSmiL2-0.5
Retrosplenial cortex middle part layer 3ipsiRSmiL3-0.5
Retrosplenial cortex middle part layer 4ipsiRSmiL4-0.5
Retrosplenial cortex middle part layer 5ipsiRSmiL5-0.5
Retrosplenial cortex middle part layer 6ipsiRSmiL6-0.5
Retrosplenial agranular cortexipsiRSA2
Glia limitans layeripsigliaLim-0.5
Cerebral cortex layer 1ipsiCCL1-0.5
Cingulate cortexipsiCg4
Anterior cingulate cortexipsiACC3
Cingulate cortex area 1ipsiCg13
Cingulate cortex area 1 caudal partipsiCg1c1
Cingulate cortex area 2 caudal partipsiCg2c1
Prelimbic cortexipsiPrL3
Infralimbic cortexipsiIL2
NeocortexipsiNEOCX1
Frontal association cortexipsiFrA3
Frontal association cortex lateral aspectipsiFrALA2
Frontal cortex area 2ipsiFr23
Most ventral part of the pregenual part of the anteromedial cortexipsiFr2mvpg1
Frontal cortex medial aspectipsiFrAma-0.5
Temporoparietal cortexipsiTPcx-0.5
Parietal association cortexipsiPtA1.5
Lateral parietal association cortexipsiLPtA2
Temporal cortexipsiTE2
Deep gray matter of the temporal association cortex 1ipsiTeAdL3
Ventral temporal association cortexipsiTev2
Auditory regionsipsiAU3
Frontal polar cortexipsiFP1
Insular cortexipsiICX2
Agranular insular cortexipsiAI3
Agranular insular cortex dorsal part deep layersipsiAIDdL-0.5
Agranular insular cortex dorsal part superficial layersipsiAIDsL3
Agranular insular cortex rostral partipsiRAIC3
Agranular insular cortex ventral part jaw movement areaipsiAIVjm3
Dysgranular insular cortexipsiDI-0.5
Granular insular cortexipsiGI2
Prefrontal cortexipsiPFC4
Prefrontal cortex supragenual partipsisgPFC1
Dorsal part of the pregenual sector of the prefrontal cortexipsidpgPFC1
Somatomotoric regionsipsiSMR3
Motoric regionsipsiM3
Lateral prefrontal cortexipsilPFC3
Jaw movement motor cortexipsiJMCx2.5
Whiskers motor cortexipsiWMCx3
Medial prefrontal cortexipsimPFC3
Medial prefrontal cortex posterior partipsimPFCp1
Medial agranular prefrontal cortexipsiAGm1
Sensory regionsipsiSR2
Primary somatosensory cortexipsiS1-0.5
Primary somatosensory cortex barrel fieldipsiS1BF3
Visual regionsipsiVR3
Primary visual cortexipsiV13
Orbitofrontal cortexipsiOrFCx-0.5
Anterior medial frontal cortexipsiAMFC2.5
Lateral orbital cortexipsiLO-0.5
Medial orbital cortexipsiMO3
Ventrolateral orbital areaipsiVLO3
Ventrolateral orbital area layersipsiVLOL3
Adjacent neocortical region to lateral orbital and agranular insular cortexipsiALOrAiC-0.5
Nucleus of the posterior commissureipsiPCom-0.5
Precommissural nucleusipsiPrC0
Dorsal geniculate nucleusipsiDLG-0.5
Dorsal geniculate nucleus lateral partipsiDLGl-0.5
Lateral geniculate complexipsiLG2
Intergeniculate leafipsiIGL-0.5
Ventral lateral geniculate nucleusipsiVLG1
Dorsal portion of the lateral geniculate complexipsiLGD1
Medial geniculate nucleusipsiMG1
Interpeduncular nucleusipsiIP4
Interpeduncular nucleus dorsal subnucleusipsiIPRd3
Interpeduncular nucleus lateral subnucleusipsiIPL-0.5
Interpeduncular nucleus rostral subnucleus central partipsiIPRce-0.5
Interpeduncular nucleus ventral partipsiIPv0
Olfactory bulb A16ipsiMOB4
Olfactory cortexipsiOcx2
Anterior olfactory cortexipsiOCOA2
Anterior olfactory cortex layer 1ipsiOCOAL1-2
Glomerular layer of the olfactory bulbipsiOBglo3
Granular cell layer of the olfactory bulbipsiOBgra1
Olfactory cortex plexiform layeripsiOcxLpx0
Main olfactory bulb infraglomerular layersipsiOcxLig1
Anterior olfactory nucleusipsiAON1.5
Olfactory tubercleipsiTuO3
Olfactory tubercle lateral partipsiTuOL1
Septal regionipsiSER3
Dorsal medial septumipsiDMS-1
Lateral septal nucleusipsiLS2
Lateral septal nucleus caudal partipsiLSc3
Lateral septal nucleus dorsal partipsiLSD-0.5
Lateral septal nucleus intermediate partipsiLSI3
Lateral septal nucleus rostral partipsiLSr-0.5
Lateral septal nucleus ventral partipsiLSV3
Septofimbrial nucleusipsiSFi-0.5
Ventral medial septumipsiVMSe-1
Stria terminalisipsist-2
3d ventricleipsi3V-0.5
Ependyma of the 3d ventricleipsie3V-0.5
Ependyma of rostral 3d ventricleipsi3VRe-0.5
4th ventricleipsi4V-0.5
Ventral border of the 4th ventricleipsiVB4V-2
Dorsal part of the aqueductal ependymaipsidAqE-0.5
Choroid plexusipsiChp-0.5
Periventricular plexusipsiPVPlex-2
Lateral ventricleipsiLV-0.5
Lateral ventricle ependymal wallipsiLVew-0.5
Spinal cordipsiMES-0.5
Cervical segment 1ipsiCS11
Cervical segment 2ipsiCS21
Cervical segment 3ipsiCS31
Cervical segment 4ipsiCS4-0.5
Intermediomedial cell column C4ipsiIMMC43
Cervical segment 5ipsiCS5-0.5
Intermediomedial cell column C5ipsiIMMC53
Cervical segment 6ipsiCS6-0.5
Cervical segment 7ipsiCS71
Cervical segment 8ipsiCS81
Thoracal segmentsipsiTSeg-0.5
Thoracal segment 1ipsiT13
Thoracal segment 2ipsiT23
Intermediolateral cell column T2ipsiIMLT2-0.5
Thoracal segment 3ipsiT33
Intermediolateral cell column T3ipsiIMLT3-0.5
Thoracal segment 4ipsiT43
Thoracal segment 5ipsiT51
Thoracal segment 6ipsiT61
Thoracal segment 7ipsiT71
Intermediolateral cell column T7ipsiIMLT7-0.5
Thoracal segment 8ipsiT81
Intermediolateral cell column T8ipsiIMLT8-0.5
Thoracal segment 9ipsiT91
Intermediolateral cell column T9ipsiIMLT9-0.5
Intermediolateral cell column T11ipsiIMLT11-0.5
Intermediolateral cell column T12ipsiIMLT12-0.5
Intermediolateral cell column T13ipsiIMLT13-0.5
Lumbar segment 1ipsiL10
Intermediolateral cell column L1ipsiIMLL1-0.5
Intermediomedial cell column L1ipsiIMML12
Ventral horn L1ipsiVHL13
Lumbar segment 2ipsiL20.5
Intermediomedial cell column L2ipsiIMML22
Ventral horn L2ipsiVHL23
Lumbar segment 3ipsiL30.5
Intermediomedial cell column L3ipsiIMML32
Ventral horn L3ipsiVHL33
Lumbar segment 4ipsiL4-0.5
Intermediomedial cell column L4ipsiIMML42
Lumbar segment 5ipsiL5-0.5
Intermediomedial cell column L5ipsiIMML52
Lumbar segment 6ipsiL6-0.5
Intermediomedial cell column L6ipsiIMML62
Sacral segment 1ipsiSa10
Sacral segment 2ipsiSa20
Sacral segment 3ipsiSa30
Sacral segment 4ipsiSa40
Vagus nervecontraAutoV-10
Stellate ganglionipsiAutoSteG0.5
Vagus nerveipsiAutoV-10
Sympathetic nervous systemipsiSNS1
Parasympathetic nervous systemipsiPaNS1
Cervical oesophagusipsiOrgsOesC-0.5
Submandibular glandcontraOrgsSubg-10
Trapezius musclecontraMuscTrap1
Adrenal glandipsiADRE-0.5
Submandibular glandipsiOrgsSubg-10
Orbicularis oculi muscleipsiMuscOrbOc-0.5
Gastrocnemius muscleipsiMuscGC-0.5
Lumbar epaxial musclesipsiMuscLep-0.5
Trapezius muscleipsiMuscTrap1
Musculus abductor caudae dorsalisipsiMuscAbdCaDo-10
OvaryipsiOrgOvar-10
Detrusor muscle of the urinary bladderipsiOrgUrBLaDe-10
Pancreas sidecontraOrgsPancs-0.5
Pancreas sideipsiOrgsPancs-0.5

Input from

NameSideAbbr.WeightDetails
Central graycontraCG-0.5
Periaqueductal graycontraPAG3
Dorsal periaqueductal gray caudal partcontraDPAGC0
Dorsolateral periaqueductal gray caudal partcontraPAGdlc0
Dorsolateral periaqueductal gray rostral partcontraPAGdlr0
Ventrolateral periaqueductal gray caudal partcontraPAGvlc2
Ventrolateral periaqueductal gray rostral partcontraPAGvlr0
Superior colliculuscontraSC1
Substantia nigra A9contraSN1
Ventral tegmental area A10contraVTA4
Peripeduncular areacontraPPA0
Laterodorsal tegmental nucleuscontraLDTg1
Dorsal tegmental nucleuscontraDTg1
Pedunculopontine tegmental nucleuscontraPPTg1.5
Rostral mesopontine tegmental anesthesia areacontraRMTGA-0.5
Dorsal mesopontine tegmental anesthesia areacontraDMTGA-0.5
Mid-level mesopontine tegmental anesthesia areacontraMLMTGA-0.5
Ventral mesopontine tegmental anesthesia areacontraVeMTGA-0.5
Caudal mesopontine tegmental anesthesia areacontraCMTGA-0.5
Tegmental area lateral to the ventral tegmental nucleuscontraTGAL1
Tegmental area ventral to the ventral tegmental nucleuscontraTGAV1
Edinger Westphal nucleuscontraEW-0.5
Dorsolateral humpcontraCERcndl0
Anterior interposed nucleuscontraAIN0
Posterior interposed nucleuscontraCERpin0
Lateral cerebellar nucleuscontraCERL1
Medial cerebellar nucleuscontraMed0.5
Locus coeruleuscontraLC2
Prepositus nucleuscontraPr2
Pontine reticular nucleuscontraPRN1
Lateral parabrachial nucleuscontraLPB2
Medullary reticular nucleus dorsal partcontraMdDd3
Supragenual nucleuscontraSGe0.5
Vestibular nucleicontraVnc-0.5
Raphe nucleicontraRAN1
Ventral respiratory groupcontraVReG0
Cuneate nucleuscontraCu1
Basal forebraincontraBAF1.5
Endopiriform systemcontraEnN1.5
Diagonal band of BrocacontraDBB-0.5
Nucleus of the horizontal limb of the diagonal bandcontraHDB1
Nucleus of the vertical limb of the diagonal band dorsal partcontraVDBDo-0.5
Medial septal nucleuscontraMS1
Basal nucleus MeynertcontraB1
Preoptic regioncontraPREO1.5
Intermediate hypothalamic cell groupscontraIHCG-0.5
Magnocellular preoptic nucleuscontraMCPO1
Dorsomedial hypothalamic nucleuscontraDMHy-0.5
Perifornical hypothalamic area [Preoptic anterior region]contraPFxPAR-0.5
Lateral zonecontraLHA-0.5
Lateral hypothalamic areacontraLH1.5
Lateral hypothalamic area dorsal partcontraLHd-0.5
Lateral hypothalamic area ventral partcontraLHAvp-0.5
Lateral hypothalamic area [Lateral zone mammillary level]contraLHLZM3
Anterior hypothalamic areacontraAHA-0.5
Dorsal hypothalamic areacontraDA1
Dorsomedial hypothalamic nucleus [Medial zone]contraDM-0.5
Posterior hypothalamic areacontraPHA0
Posterior hypothalamic nucleus caudal partcontraPHCa0.5
Posterior hypothalamic nucleus rostral partcontraPHRo0.5
Ventromedial hypothalamic nucleuscontraVMH1
Ventromedial hypothalamic nucleus ventrolateral partcontraVMHVL-0.5
Periventricular zonecontraPVZ-0.5
Arcuate nucleuscontraArc-0.5
Paraventricular hypothalamic nucleuscontraPa-0.5
Mammillary bodycontraCMAM0
Premammillary nucleus dorsal partcontraPMD0.5
Perifornical nucleuscontraPeF1
Medial part of the caudal perifornical areacontraPeFCM-0.5
Lateral part of the caudal perifornical areacontraPeFCL-0.5
ThalamuscontraT0
Anterior group of the dorsal thalamuscontraATN2
Medial group of the dorsal thalamuscontraMED1.5
Mediodorsal thalamic nucleuscontraMD1.5
Paraventricular thalamic nucleuscontraPV1
Ventrobasal complexcontraVB0
Zona incerta medial partcontraZIm1
HabenulacontraHAB2
Lateral habenular nucleuscontraLHb3
Anteroposterior habenulacontraHABap1
Pretectal regioncontraPRT-0.5
RetinacontraRET1
Retina ganglion cells of the inferior retinacontraRETgcLi1
Basolateral amygdaloid nucleuscontraBL0.5
Basomedial amygdaloid nucleuscontraBM0.5
Bed nucleus of the stria terminaliscontraBST1.5
Central amygdaloid nucleuscontraCe0
Cortical amygdaloid nucleuscontraCAn0.5
Globus palliduscontraGP0
Caudate putamencontraCPu0
Parasubthalamic nucleuscontraPSTh2
Dentate gyruscontraDG0
Cingulate cortexcontraCg1.5
Anterior cingulate cortexcontraACC2
Anterior cingulate cortex layer 5contraACCL5-0.5
Dorsal anterior cingulate cortexcontraDACC2
Prelimbic cortex dorsal partcontraPrLd2
Prelimbic cortex layer 5contraPrLL53
Prelimbic cortex rostral partcontraPrLr-0.5
Prelimbic cortex ventral partcontraPrLv1.5
Infralimbic cortexcontraIL2
Infralimbic cortex layer 1contraILL11.5
Infralimbic cortex layer 2contraILL23
Infralimbic cortex layer 5contraILL53
Infralimbic cortex layer 6contraILL63
Infralimbic cortex layer 6bcontraILL6b3
Infralimbic cortex layer 3contraILL33
Infralimbic cortex layer 4contraILL43
Parietal association cortexcontraPtA0
Agranular insular cortex layer 5contraAIL5-0.5
Dorsal peduncular cortexcontraDP2
Dorsal peduncular cortex layer 5contraDPL53
Dorsal peduncular cortex layer 6contraDPL63
Dorsal peduncular cortex layer 6bcontraDPL6b3
Dorsal peduncular cortex layer 1contraDPL11.5
Dorsal peduncular cortex layer 2contraDPL23
Dorsal peduncular cortex layer 3contraDPL33
Dorsal peduncular cortex layer 4contraDPL43
Mid-dorsal peduncular cortexcontraMiDP1
Medial prefrontal cortexcontramPFC3
Medial prefrontal cortex layer 5contramPFCL53
Medial prefrontal cortex layer 6contramPFCL63
Medial prefrontal cortex layer 6bcontramPFCL6b3
Medial prefrontal cortex layer 3contramPFCL33
Medial prefrontal cortex layer 4contramPFCL43
Medial prefrontal cortex layer 2contramPFCL23
Medial prefrontal cortex ventral part layer 1contramPFCVL11.5
Medial prefrontal cortex ventral part layer 2contramPFCVL21.5
Medial prefrontal cortex ventral part layer 3contramPFCVL31.5
Medial prefrontal cortex ventral part layer 4contramPFCVL41.5
Medial prefrontal cortex ventral part layer 5contramPFCVL53
Medial prefrontal cortex ventral part layer 6contramPFCVL61.5
Medial agranular prefrontal cortexcontraAGm2
Medial agranular prefrontal cortex caudal partcontracAGm3
Anterior medial frontal cortexcontraAMFC2
Lateral orbital cortexcontraLO2
Ventrolateral orbital areacontraVLO2
Lateral orbitofrontal cortexcontraLOFC2
Lateral orbitofrontal cortex layer 5contraLOFCL5-0.5
Ventral orbitofrontal cortexcontraVOFC2
Ventral orbitofrontal cortex layer 5contraVOFCL5-0.5
Nucleus of the posterior commissurecontraPCom3
Interpeduncular nucleuscontraIP-0.5
Middle cerebral arteryipsimcer-0.5
MesencephalonipsiMEC3
Central grayipsiCG-0.5
Nucleus of DarkschewitschipsiDk-0.5
Rostral interstitial nucleus of medial longitudinal fasciculusipsiRI2
Periaqueductal grayipsiPAG3
Dorsal periaqueductal gray caudal partipsiDPAGC0
Dorsolateral periaqueductal grayipsiDLPAG0.5
Dorsolateral periaqueductal gray caudal partipsiPAGdlc0.5
Dorsolateral periaqueductal gray rostral partipsiPAGdlr0
Dorsomedial periaqueductal grayipsiDMPAG1
Lateral periaqueductal grayipsiLPAG3
Periaqueductal gray rostrolateral partipsiPAGRL-0.5
Ventral periaqueductal grayipsiVPAG3
Ventrolateral periaqueductal grayipsiVLPAG3
Ventrolateral periaqueductal gray caudal partipsiPAGvlc2
Ventrolateral periaqueductal gray rostral partipsiPAGvlr0.5
Periventricular gray matteripsiPVG3
Inferior colliculusipsiICOL1
Superior colliculusipsiSC1
Mesopontine tegmental area caudal partipsiTGAmc1.5
Mesopontine tegmental area dorsal partipsiTGAmd2
Mesopontine tegmental area mid-levelipsiTGAmm1.5
Mesopontine tegmental area rostral partipsiTGAmr1.5
Mesopontine tegmental area ventral partipsiTGAmv1
Nucleus intercruralisipsiNICr-0.5
Peduncularpontine nucleusipsiPPN-0.5
Rostromedial tegmental nucleusipsiRMTg3
Ventral midbrain tegmentumipsiVeMT4
Substantia nigra A9ipsiSN3
Substantia nigra compact partipsiSNC3
Substantia nigra compact part lateral tieripsiSNCL3
Substantia nigra compact part medial tieripsiSNCM-0.5
Substantia nigra reticular compacta border regionipsiSNRCB-0.5
Substantia nigra reticular partipsiSNR3
Substantia nigra reticular part dorsomedial tieripsiSNRDM3
Ventral tegmental area A10ipsiVTA4
Ventral tegmental tailipsiVTTa1
Caudal linear nucleus of the rapheipsiCLi1
Peripeduncular areaipsiPPA0
Transitional region between ventral tegmental area and the medial substantia nigra pars compactaipsiTRVTAmSNC4
Ventrolateral tegmental areaipsiVLTg4
Dorsomedial part of the ventrolateral tegmental areaipsiDMVLTg-0.5
Laterodorsal tegmental nucleusipsiLDTg3
Ventral tegmental nucleusipsiVTg-0.5
Dorsal tegmental nucleusipsiDTg1
Dorsal tegmental nucleus lateral partipsiDLTN1
Pedunculopontine tegmental nucleusipsiPPTg3
Pedunculopontine tegmental nucleus caudal partipsiPPTgC1.5
Pedunculopontine tegmental nucleus dorsal partipsiPPTgd2
Pedunculopontine tegmental nucleus mid levelipsiPPTgmL1.5
Pedunculopontine tegmental nucleus rostral partipsiPPTgR1.5
Pedunculopontine tegmental nucleus ventral partipsiPPTgv1
Rostral mesopontine tegmental anesthesia areaipsiRMTGA3
Dorsal mesopontine tegmental anesthesia areaipsiDMTGA3
Mid-level mesopontine tegmental anesthesia areaipsiMLMTGA2
Ventral mesopontine tegmental anesthesia areaipsiVeMTGA1
Caudal mesopontine tegmental anesthesia areaipsiCMTGA3
Tegmental area lateral to the ventral tegmental nucleusipsiTGAL1
Tegmental area ventral to the ventral tegmental nucleusipsiTGAV1
Rostral to the nucleus of DarkschewitschipsiRVMMM3
Edinger Westphal nucleusipsiEW3
Interstitial nucleus of CajalipsiInC-0.5
Cerebellar cortexipsiCERC0
Dorsolateral humpipsiCERcndl0
Anterior interposed nucleusipsiAIN0
Posterior interposed nucleusipsiCERpin0
Lateral cerebellar nucleusipsiCERL1
Medial cerebellar nucleusipsiMed0
Superior cerebellar peduncleipsisucep3
A5 noradrenaline cellsipsiA5-0.5
Barringtons nucleusipsiBar2
Locus coeruleusipsiLC2
Prelocus coeruleus nucleusipsiPLC3
Nucleus incertus pars compactaipsiNIc3
Pons caudal partipsiPca-0.5
Pons oral partipsiPor-0.5
Pontine periventricular grayipsiPPG1
Pontine sublaterodorsal nucleusipsiPsLdn-0.5
Pontine gray caudal partipsiPGCa-0.5
Reticulotegmental nucleus of the ponsipsiRtTg0
Ventral pontine grayipsiVPG3
Prepositus nucleusipsiPr2
Reticular systemipsiRF3
Magnocellular reticular nucleusipsiNRMC1
Medial reticular formationipsiRFm-0.5
Mesencephalic reticular formationipsiMRF1
Central part of the mesencephalic reticular formationipsiCMRF-0.5
Deep mesencephalic nucleusipsiDpMe3
Pontine reticular nucleusipsiPRN4
Pontine reticular nucleus oral partipsiPnO-0.5
Middle rostrocaudal extent of the pontine reticular nucleus oral partipsiPnOmrce2
Rostral oral pontine reticular nucleusipsiPnRO3
Pontomesencephalic reticular formationipsiPMRF3
Peribrachial regionipsiPBR3
Cuneiforme nucleusipsiCnF1
Parabrachial nucleusipsiPB-0.5
Koelliker Fuse nucleusipsiKF3
Lateral parabrachial nucleusipsiLPB3
Parabrachial nucleus central partipsiPBCe2
Parabrachial nucleus dorsal partipsiPBD2
Dorsal lateral parabrachial nucleusipsiPBDoL1
Parabrachial nucleus external divisonipsiPBeD2
Parabrachial nucleus medialipsiPBnMe3
Parabrachial nucleus ventral partipsiPBV2
Parabrachial nucleus waist partipsiPBW3
Gigantocellular reticular nucleusipsiGi1
Gigantocellular reticular nucleus alpha partipsiGiA1
Gigantocellular reticular nucleus caudal partipsiGiCa3
Gigantocellular reticular nucleus ventral partipsiGiV1
Lateral reticular nucleusipsiLRt-0.5
Medullary reticular nucleus dorsal partipsiMdDd3
Subcoeruleus nucleusipsiSubC1
Subcoeruleus nucleus dorsal partipsiSubCD2
C1 adrenaline cellsipsiC1-0.5
C2 adrenaline cellsipsiC2-0.5
C3 adrenaline cellsipsiC3-0.5
Genu of the facial nerveipsig7-2
Mesencephalic trigeminal nucleusipsiMe53
Principal sensory trigeminal nucleusipsiPr51
Spinal trigeminal nucleusipsiSp5nc1
Trochlear nucleusipsi40
Vestibular nucleiipsiVnc-0.5
Superior vestibular nucleusipsiSuVe1
Medial vestibular nucleusipsiMVe-0.5
Nucleus of the solitary tractipsiSol3
11 beta hydroxysteroiddehydrogenase type-2 cellsipsiSolHSD20
Caudal nucleus of the solitary tract medial partipsiSolcame1
Nucleus of the solitary tract commissural partipsiSolC1
Raphe nucleiipsiRAN1
Dorsal raphe nucleusipsiDR-0.5
Dorsal raphe nucleus caudal partipsiDRC3
Dorsal raphe nucleus dorsolateral partipsiDRdL-0.5
Dorsal raphe nucleus medial partipsiDRNM-0.5
Dorsal raphe nucleus rostral partipsiDRr-0.5
Dorsal raphe nucleus ventral partipsiDRV-0.5
Rostral linear nucleus of the rapheipsiRLi1
Median raphe nucleusipsiMnR1
Central raphe nucleusipsiCRN1
Central raphe nucleus caudal partipsiCRNC1
Dorsalmost region of the median raphe nucleusipsiMnRdm-0.5
Superior central raphe nucleusipsiCS2
Ventral two-thirds of the median raphe nucleusipsiMnRVtt0
Pontine raphe nucleusipsiPnR3
Raphe magnus nucleusipsiRMg3
Raphe magnus nucleus rostral partipsiRMgR-0.5
B9 serotonin cellsipsiB90
A1 noradrenergic cellsipsiA1-0.5
A2 noradrenergic cellsipsiA2-0.5
Ventral respiratory groupipsiVReG0
Dorsomedial rostral medulla oblongataipsiMeObdmr-0.5
Superior oliveipsiSuOLi1
Paragigantocellular reticular nucleusipsiPGi1
Dorsal paragigantocellular nucleusipsiDPGi2
Caudal part of the dorsal paragigantocellular nucleusipsiDPGiC3
Lateral paragigantocellular nucleusipsiLPGi-0.5
Lateral paragigantocellular nucleus alpha partipsiLPBGiA-0.5
Rostral ventral respiratory groupipsiRVRG-2
Rostral part of the ventromedial medulla oblongataipsiRMeObvm1
Basal forebrainipsiBAF2
Endopiriform systemipsiEnN2
Diagonal band of BrocaipsiDBB2
Horizontal branch of diagonal band of BrocaipsiHBDBB1
Nucleus of the horizontal limb of the diagonal bandipsiHDB1.5
Nucleus of the vertical limb of the diagonal bandipsiVDB3
Nucleus of the vertical limb of the diagonal band lateral borderipsiVDBLb-0.5
Medial septal nucleusipsiMS3
Basal nucleus MeynertipsiB1.5
Substantia innominataipsiSI2
Substantia innominata dorsal partipsiSID-0.5
Medial tuberal nucleusipsiMTuN2
Preoptic regionipsiPREO2
Intermediate hypothalamic cell groupsipsiIHCG1.5
Lateral preoptic areaipsiLPO3
Lateral preoptic area dorsal partipsiLPOd2
Medial preoptic areaipsiMPA2
Medial preoptic area dorsolateral partipsiMPADL2
Median preoptic areaipsiMnPA1
Lateral preoptic nucleusipsiLPN1
Magnocellular preoptic nucleusipsiMCPO2
Medial preoptic nucleusipsiMPO1.5
Median preoptic nucleusipsiMnPO-0.5
Ventral part of the median preoptic nucleusipsiMnPOV3
Dorsal median preoptic nucleusipsiMnPOD-0.5
Median preoptic nucleus caudal levelipsiMnPOC2.5
Median preoptic nucleus rostral levelipsiMnPOR2
Ventrolateral preoptic nucleusipsiVLPO2.5
Midrostral part of the ventrolateral preoptic nucleusipsiVLPOmr3
Dorsolateral preoptic regionipsiPREOdL2
Tuberomammillary nucleusipsiTuM1
Laterally in the basal forebrainipsiLBAF1
Vascular organ of the lamina terminalisipsiVOLT-0.5
Dorsomedial hypothalamic nucleusipsiDMHy3
Dorsal regionipsiDHR3
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC1
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0
Lateral hypothalamic area anterior part [Preoptic anterior region]ipsiLHAapar2
Lateral hypothalamic area posterior part [Preoptic anterior region]ipsiLHApPAR2
Lateral hypothalamic area premammillary subfornical region [Preoptic anterior region]ipsiLHAsfp2
Perifornical hypothalamic area [Preoptic anterior region]ipsiPFxPAR2
Lateral zoneipsiLHA3
Lateral hypothalamic areaipsiLH4
Lateral hypothalamic area dorsal partipsiLHd1
Lateral hypothalamic area juxtadorsomedial regionipsiJDM2
Lateral hypothalamic area motor related juxtaventromedial regionipsiLHAjvm0.5
Lateral hypothalamic area motor related juxtaventromedial region dorsal zoneipsiLHAjvd0.5
Lateral hypothalamic area motor related juxtaventromedial region ventral zoneipsiLHAjvv0.5
Lateral hypothalamic area subfornical region anterior zoneipsiLHAsfa2
Lateral hypothalamic area perifornical partipsiPFx4
Lateral hypothalamic area posterior partipsiLHAp2
Lateral hypothalamic area rostrocaudal extendipsiLHrce3
Lateral hypothalamic area ventral partipsiLHAvp2
Peduncular part of lateral hypothalamusipsiPLH-0.5
Lateral hypothalamic area [Lateral zone mammillary level]ipsiLHLZM3
Magnocellular nucleus of the lateral hypothalamusipsiMCLH-0.5
Posterolateral hypothalamusipsiPLHY3
Supraoptic nucleus [Lateral zone]ipsiSOLZ-0.5
Tuberal division of the lateral hypothalamic areaipsiLHTC-0.5
Medial division of the hypothalamusipsiMdH-0.5
Anterior hypothalamic areaipsiAHA3
Anterior hypothalamic nucleusipsiAHn0
Area lateralis hypothalamicus posterior [Regio hypothalamus caudalis]ipsiDMrhc1
Dorsal hypothalamic areaipsiDA3
Dorsomedial hypothalamic areaipsiDMHyA3
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM4
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM4
Posterior hypothalamic areaipsiPHA3
Caudal magnocellular nucleusipsiCMC1
Posterior hypothalamic area dorsal partipsiPHD-0.5
Midlateral posterior hypothalamic areaipsiPHAmL-0.5
Posterior hypothalamic nucleusipsiPH2
Posterior hypothalamic nucleus caudal partipsiPHCa1
Posterior hypothalamic nucleus rostral partipsiPHRo1
Subparaventricular zoneipsiSuPZ-0.5
Subparaventricular zone ventromedial partipsiSuPZvm1
Subparaventricular zone dorsomedial partipsiSuPZdm0
Subparaventricular zone dorsolateral partipsiSuPZdL0.5
Ventromedial hypothalamic nucleusipsiVMH3
Ventromedial hypothalamic nucleus central partipsiVMHC0.5
Ventromedial hypothalamic nucleus shellipsiVMS0
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL0.5
Periventricular zoneipsiPVZ1
Arcuate nucleusipsiArc-0.5
Arcuate nucleus lateral partipsiArcL0.5
Ventral and lateral borders of the arcuate nucleus medial partipsiArcMVL-0.5
Nucleus paraventricularis [Periventricular zone anterior region]ipsiPaPAR1
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]ipsiPaMP1
Paraventricular hypothalamic nucleus medial parvocellular partipsiMPPa2
Paraventricular hypothalamic nucleusipsiPa2
Paraventricular hypothalamic nucleus magnocellular divisionipsiPaMag1
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo2
Periventricular hypothalamic nucleusipsiPe1
Periventricular hypothalamic nucleus parvicellular partipsiPepcp-0.5
Ventricular region of the periventricular hypothalamic nucleus parvicellular partipsiPepcpv-0.5
Suprachiasmatic nucleusipsiSCh-0.5
Supraoptic nucleus [Supraoptic region]ipsiSO2
Periventricular groupipsiPEG-0.5
Incerto hypothalamic areaipsiicHYPO3
Basomedial hypothalamusipsibmHYPO-0.5
Mammillary bodyipsiCMAM0
Lateral mammillary nucleusipsiLM0
Medial mammillary nucleusipsiMMn0
Premammillary nucleus dorsal partipsiPMD1
Submammillothalamic nucleusipsiSMT1
Supramammillar nucleusipsiSuM1
Supramammillar nucleus lateral partipsiSuML2
Supramammillar nucleus lateral part lateral subpartipsiSuMLL1
Supramammillar nucleus lateral part medial subpartipsiSuMLM3
Supramammillar nucleus medial partipsiSuMM1
Anterior perifornical nucleusipsiAPF-0.5
Perifornical nucleusipsiPeF3
Medial part of the caudal perifornical areaipsiPeFCM2
Lateral part of the caudal perifornical areaipsiPeFCL2
Retrochiasmatic areaipsiRCh0.5
Subincertal nucleusipsiSubI2
ThalamusipsiT0
Anterior group of the dorsal thalamusipsiATN2
Anteroventral thalamic nucleusipsiAV2.5
Borderline between anterior group of the dorsal thalamus and anterior ventral nucleus of the thalamusipsiBADAV2
Central medial thalamic nucleusipsiCM1
Centrolateral thalamic nucleusipsiCL3
Parafascicular thalamic nucleusipsiPF2
Parafascicular thalamic nucleus lateral partipsiPFL3
Parafascicular thalamic nucleus ventral partipsiPFV2.5
Medial group of the dorsal thalamusipsiMED2
Mediodorsal thalamic nucleusipsiMD2
Paraventricular thalamic nucleusipsiPV1.5
Subfascicular nucleusipsiSFN2
Subfornical organipsiSFO3
Ventrobasal complexipsiVB2
Zona incertaipsiZI3
Forel field H1ipsiFFH12
Forel field H2ipsiFFH22
Zona incerta dorsal partipsiZID4
Rostrocaudal part of the dorsal zona incertaipsiZIrcD4
Zona incerta medial partipsiZIm3
Tuber cinereum areaipsiTC2
HabenulaipsiHAB2
Lateral habenular nucleusipsiLHb4
Lateral habenular nucleus central partipsiLHbc2
Lateral habenular nucleus lateral partipsiLHbL-0.5
Lateral habenular nucleus lateral part magnocellular subnucleusipsiLHbLMc2
Lateral habenular nucleus medial partipsiLHbM3
Lateral habenular nucleus medial part marginal subnucleusipsiLHbMMg2
Central subnucleus of the medial part of the lateral habenular nucleusipsiLHbMCe2
Lateral habenular nucleus oval subnucleusipsiLHbos0.5
Medial habenular nucleusipsiMHb2
Anteroposterior habenulaipsiHABap1
Pretectal regionipsiPRT-0.5
Medial forebrain bundleipsimfb1
RetinaipsiRET-0.5
Retina ganglion cells of the inferior retinaipsiRETgcLi1
Amygdaloid complexipsiAC1
Accessory basal nucleusipsiAB2
Basolateral amygdaloid nucleusipsiBL3
Basomedial amygdaloid nucleusipsiBM1.5
Bed nucleus of the stria terminalisipsiBST2
Bed nucleus of the stria terminalis anterior division dorsomedial nucleusipsiBSTdm1
Bed nucleus of the stria terminalis anterior medial partipsiBSTAM-0.5
Bed nucleus of the stria terminalis anterior ventral areaipsiBSTAV1
Bed nucleus of the stria terminalis fusiform partipsiFu2
Bed nucleus of the stria terminalis oval nucleusipsiBSTo1
Bed nucleus of the stria terminalis lateral divisionipsiBSTL2
Bed nucleus of the stria terminalis lateral division dorsal partipsiBSTLD-0.5
Bed nucleus of the stria terminalis lateral division posterior partipsiBSTLP-0.5
Bed nucleus of the stria terminalis lateral division ventral partipsiBSTLV-0.5
Bed nucleus of the stria terminalis posterior divisionipsiBSTP2
Bed nucleus of the stria terminalis ventral partipsiBNSTv2
Bed nucleus of the stria terminalis ventral tipipsiBNSTvt2
Central amygdaloid nucleusipsiCe3
Central amygdaloid nucleus lateral divisionipsiCeL2
Central amygdaloid nucleus medial divisionipsiCeM3
Central amygdaloid nucleus medial division rostral partipsiCeMR2
Central amygdaloid nucleus rostral partipsiCerp2
Central amygdaloid nucleus central partipsiCece2
Interstitial nucleus of the posterior limb of the anterior commissure medial partipsiIPACM1
Anterior amygdaloid areaipsiAA-0.5
Cortical amygdaloid nucleusipsiCAn1.5
Medial amygdaloid nucleusipsiMe3
Medial amygdaloid nucleus anterodorsal partipsiMeAD1
Medial amygdaloid nucleus anteroventral partipsiMeAV0.5
Medial amygdaloid nucleus posteroventral partipsiMePV1
ClaustrumipsiCl3
Globus pallidusipsiGP1.5
Ventral pallidumipsiVP2
Accumbens nucleusipsiAc1
Accumbens nucleus shellipsiAcbSh-0.5
Caudate putamenipsiCPu2
Fundus of the striatumipsiFS1
Subthalamic nucleusipsiSTh1
Subthalamic nucleus medial partipsiSThM2
HippocampusipsiHIPP-0.5
Dentate gyrusipsiDG0.5
Subiculum ventral partipsiSv1
Area 29ipsiA29-0.5
Cingulate cortexipsiCg2
Anterior cingulate cortexipsiACC3
Anterior cingulate cortex layer 5ipsiACCL5-0.5
Cingulate cortex area 1 caudal partipsiCg1c2.5
Cingulate cortex area 1 layer 2ipsiCg1L2-0.5
Cingulate cortex area 1 layer 3ipsiCg1L3-0.5
Cingulate cortex area 1 layer 5ipsiCg1L5-0.5
Dorsal anterior cingulate cortexipsiDACC2.5
Ventral anterior cingulate cortexipsiVACC1
Prelimbic cortexipsiPrL3
Prelimbic cortex dorsal partipsiPrLd2.5
Prelimbic cortex layer 2ipsiPrLL2-0.5
Prelimbic cortex layer 3ipsiPrLL3-0.5
Prelimbic cortex layer 5ipsiPrLL53
Prelimbic cortex layer 6ipsiPrLL63
Prelimbic cortex rostral partipsiPrLr-0.5
Prelimbic cortex ventral partipsiPrLv1.5
Infralimbic cortexipsiIL3
Infralimbic cortex layer 1ipsiILL11.5
Infralimbic cortex layer 2ipsiILL23
Infralimbic cortex layer 5ipsiILL53
Infralimbic cortex layer 6ipsiILL63
Infralimbic cortex layer 6bipsiILL6b3
Infralimbic cortex layer 3ipsiILL33
Infralimbic cortex layer 4ipsiILL43
Frontal association cortexipsiFrA-0.5
Frontal cortex area 2ipsiFr22
Frontal cortex area 3ipsiFr3-0.5
Parietal association cortexipsiPtA1
Parietal cortex posterior area dorsal partipsiParPD-0.5
Parietal cortex posterior area rostral partipsiParPR-0.5
Temporal association area 3 rostral partipsiTe3R-0.5
Ventral temporal association cortexipsiTev-0.5
Agranular insular cortexipsiAI1
Agranular insular cortex layer 5ipsiAIL5-0.5
Dorsal peduncular cortexipsiDP3
Dorsal peduncular cortex layer 5ipsiDPL53
Dorsal peduncular cortex layer 6ipsiDPL63
Dorsal peduncular cortex layer 6bipsiDPL6b3
Dorsal peduncular cortex layer 1ipsiDPL11.5
Dorsal peduncular cortex layer 2ipsiDPL23
Dorsal peduncular cortex layer 3ipsiDPL33
Dorsal peduncular cortex layer 4ipsiDPL43
Mid-dorsal peduncular cortexipsiMiDP1
Prefrontal cortexipsiPFC2
Lateral agranular prefrontal cortexipsiAGl-3
Forelimb motor cortexipsiFMCx3
Medial prefrontal cortexipsimPFC3
Medial prefrontal cortex layer 5ipsimPFCL53
Medial prefrontal cortex layer 5 type 1 pyramidal cellipsimPFCL5t1-0.5
Medial prefrontal cortex layer 6ipsimPFCL63
Medial prefrontal cortex layer 6bipsimPFCL6b3
Medial prefrontal cortex layer 3ipsimPFCL33
Medial prefrontal cortex layer 4ipsimPFCL43
Medial prefrontal cortex layer 2ipsimPFCL23
Medial prefrontal cortex ventral part layer 1ipsimPFCVL11.5
Medial prefrontal cortex ventral part layer 2ipsimPFCVL21.5
Medial prefrontal cortex ventral part layer 3ipsimPFCVL31.5
Medial prefrontal cortex ventral part layer 4ipsimPFCVL41.5
Medial prefrontal cortex ventral part layer 5ipsimPFCVL53
Medial prefrontal cortex ventral part layer 6ipsimPFCVL61.5
Medial agranular prefrontal cortexipsiAGm3
Medial agranular prefrontal cortex caudal partipsicAGm3
Medial agranular prefrontal cortex rostral partipsirAGm-0.5
Sensory regionsipsiSR-0.5
Ventral medial prefrontal cortexipsivmPFC3
Primary visual cortexipsiV1-0.5
Secondary visual cortexipsiV2-0.5
Anterior medial frontal cortexipsiAMFC3
Lateral orbital cortexipsiLO-1
Lateral orbital cortex rostral partipsiLOr-0.5
Medial orbital cortexipsiMO2
Ventral orbital cortexipsiVO2
Ventrolateral orbital areaipsiVLO-1
Lateral orbitofrontal cortexipsiLOFC2
Lateral orbitofrontal cortex layer 5ipsiLOFCL5-0.5
Ventral orbitofrontal cortexipsiVOFC2
Ventral orbitofrontal cortex layer 5ipsiVOFCL5-0.5
Nucleus of the posterior commissureipsiPCom3
Precommissural nucleusipsiPrC-0.5
Intergeniculate leafipsiIGL2
Interpeduncular nucleusipsiIP2
Olfactory bulb A16ipsiMOB-0.5
Lateral septal nucleusipsiLS1
Septohypothalamic nucleusipsiSHy3
4th ventricleipsi4V-0.5
Spinal cord lamina 5ipsiMESL5-0.5
Spinal cord lamina 3ipsiMESL3-0.5
Spinal cord lamina 4ipsiMESL4-0.5
Spinal cord lamina 1ipsiMESL1-0.5
Spinal cord lamina 2ipsiMESL2-0.5
TongueipsiOrgOCT-10
Stomach wallipsiOrgsStomWS-10
Anterior digastricus muscleipsiMuscADig-10
Posterior digastricus muscleipsiMuscPDig-10
Genioglossus muscleipsiMuscGenioG-10
Geniohyoid muscleipsiMuscGenio-10
Musculus masseteripsiMuscMass-10
Temporal muscleipsiMuscT-10
Pterygoid muscleipsiMuscPterygo-10
Mylohyoid muscleipsiMuscMyhy-10
Styloglossus muscle systemipsiMuscStyG-10
Buccinator muscleipsiMuscBucc-10
PlatysmaipsiMuscPla-10
Zygomatic muscleipsiMuscZygo-10
Hyoglossus muscleipsiMuscHyo-10

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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