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Rat connectome



Retrosplenial agranular cortex layer 5 right


Abbreviation
RSAL5
Color       
Superior regionsRetrosplenial agranular cortex deep layers

SynonymsAbbr.Language
Retrosplenial agranular cortex layer 5RSAL5 

Output to

NameSideAbbr.WeightDetails
Superior colliculus deep white layercontraSAP-0.5
Optic nerve layer of the superior colliculuscontraOp-0.5
Intermediate gray layer of the superior colliculuscontraInG-0.5
Intermediate white layer of the superior colliculuscontraInWh-0.5
Deep gray layer of the superior colliculuscontraDpG-0.5
Pontine nucleicontraPn0.5
Retrosplenial agranular cortex layer 4contraRSAL43
Retrosplenial agranular cortex layer 5contraRSAL53
Retrosplenial agranular cortex layer 6contraRSAL63
Retrosplenial agranular cortex layer 1contraRSAL13
Retrosplenial agranular cortex layer 2contraRSAL23
Retrosplenial agranular cortex layer 3contraRSAL33
Medial prefrontal cortex layer 5contramPFCL51.5
Medial prefrontal cortex layer 6contramPFCL61.5
Medial prefrontal cortex layer 3contramPFCL31.5
Medial prefrontal cortex layer 4contramPFCL41.5
Lateral periaqueductal grayipsiLPAG2
Ventrolateral periaqueductal grayipsiVLPAG2
Superior colliculus deep white layeripsiSAP3
Superior colliculus deep white layer lateral partipsiSAPL1
Optic nerve layer of the superior colliculusipsiOp3
Superficial gray layer of the superior colliculusipsiSuG0.5
Intermediate gray layer of the superior colliculusipsiInG3
Intermediate white layer of the superior colliculusipsiInWh3
Deep gray layer of the superior colliculusipsiDpG3
Superior colliculus lateromedial extentipsiSCLM3
Rostrocaudal extent of the superior colliculusipsiSCRC3
Tegmental areaipsiTGA0.5
Reticulotegmental nucleusipsiRETn0.5
Pontine nucleiipsiPn1
ThalamusipsiT-0.5
Laterodorsal thalamic nucleusipsiLD2
Reticular thalamic nucleus rostral partipsiRtr2
Pretectal regionipsiPRT-2
Corpus callosumipsicc-2
Ventromedial accumbensipsiAcbVM3
PresubiculumipsiPrS3
Retrosplenial agranular cortexipsiRSA-0.5
Lateral agranular prefrontal cortexipsiAGl1.5
Medial prefrontal cortex layer 5ipsimPFCL53
Medial prefrontal cortex layer 6ipsimPFCL63
Medial prefrontal cortex layer 3ipsimPFCL33
Medial prefrontal cortex layer 4ipsimPFCL43
Primary somatosensory cortex barrel fieldipsiS1BF1.5
Primary visual cortex lateral partipsiV1La-0.5
Primary visual cortex medial partipsiV1Med-0.5
Primary visual cortex rostral partipsiV1R2
Pyramidal tractipsipy0

Input from

NameSideAbbr.WeightDetails
Retrosplenial agranular cortex layer 4contraRSAL43
Retrosplenial agranular cortex layer 5contraRSAL53
Retrosplenial agranular cortex layer 6contraRSAL63
Retrosplenial agranular cortex layer 1contraRSAL13
Retrosplenial agranular cortex layer 2contraRSAL23
Retrosplenial agranular cortex layer 3contraRSAL33
Retrosplenial granular a cortex middle part layer 2contraRSGaMiL23
Retrosplenial granular a cortex middle part layer 3contraRSGaMiL33
Retrosplenial granular a cortex middle part layer 4contraRSGaMiL43
Retrosplenial granular a cortex middle part layer 5contraRSGaMiL53
Retrosplenial granular a cortex middle part layer 6contraRSGaMiL63
Basal forebrainipsiBAF-0.5
Retrosplenial agranular cortexipsiRSA-0.5
Frontal cortex area 2 rostral partipsiFr2R1
Whiskers motor cortex layer 2ipsiWMCxL2-0.5
Whiskers motor cortex layer 3ipsiWMCxL3-0.5
Whiskers motor cortex layer 5ipsiWMCxL5-0.5
Primary visual cortex medial partipsiV1Med3
Secondary visual cortex lateral areaipsiV2L1.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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