University of Rostock

Department of Anatomy

Neuroscience Group

  Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Intermediate white layer of the superior colliculus right


Abbreviation
InWh
Color       
Superior regionsSuperior colliculus intermediate layers

SynonymsAbbr.Language
 SCiw 
Lamina V of the superior colliculus  
Lamina 5 of the superior colliculus  
Layer 5 of the superior colliculus  
Stratum album intermediale of the superior colliculus Eng
Stratum album intermediateSAIEng
Stratum album intermedium Eng
Stratum album intermediale Eng
Intermediate white layer of the superior colliculusInWhEng
Intermediate white  
Stratum album intermedialisSaiEng

SubregionsSide
Intermediate white layer lower part of the superior colliculusright
Intermediate white layer upper part of the superior colliculusright
Lateral portion of the intermediate white layer of the superior colliculusright
Upper half of the intermediate white layer of the superior colliculusright
Caudolateral stratum album intermediale of the superior colliculusright
Intermediate white layer of the superior colliculus dorsal partright
Mid-anterolateral part of the intermediate white layer of the superior colliculusright
Mid-ventral part of the intermediate white layer of the superior colliculusright

Output to

NameSideAbbr.WeightDetails
Pontine reticular nucleus oral partcontraPnO-0.5
Facial nucleus intermediate partcontra7i2
Facial nucleus dorsal intermediate subnucleuscontra7DI2
Principal sensory trigeminal nucleus ventral partcontraPr5v1
Rostral ventrolateral medullacontraRVLM1
Zona incertacontraZI0
Superior colliculusipsiSC-0.5
Superior colliculus intermediate and deep layersipsiSCidLa-0.5
Substantia nigra compact partipsiSNC3
Substantia nigra lateral partipsiSNL1
Substantia nigra medial partipsiSNM2
Reticular systemipsiRF1
Facial nucleus intermediate partipsi7i1
Facial nucleus dorsal intermediate subnucleusipsi7DI1
Hypoglossal nucleusipsi12S1
Centrolateral thalamic nucleus rostral partipsiCLr2
Parafascicular thalamic nucleusipsiPF0.5
Parafascicular thalamic nucleus caudal partipsiPFc1
Posterior thalamic nuclear groupipsiPo2
Mediodorsal thalamic nucleusipsiMD-0.5
Zona incertaipsiZI2
Pyramidal decussationipsipyx-2
Prebrachial segmentsipsiPSeg1
Pterygopalatine ganglionipsiAutoPpG-0.5

Input from

NameSideAbbr.WeightDetails
Substantia nigra reticular partcontraSNR0.5
Laterodorsal tegmental nucleuscontraLDTg-0.5
Pedunculopontine tegmental nucleuscontraPPTg-0.5
Posterior interposed nucleuscontraCERpin1
Medial cerebellar nucleuscontraMed3
Pontomesencephalic graycontraPoMG-0.5
Principal sensory trigeminal nucleuscontraPr53
Spinal trigeminal nucleuscontraSp5nc3
Spinal trigeminal nucleus interpolar partcontraSp5I3
Trigeminal subnucleus caudaliscontra5SSC3
Retrosplenial agranular cortex layer 4contraRSAL4-0.5
Retrosplenial agranular cortex layer 5contraRSAL5-0.5
Retrosplenial agranular cortex layer 6contraRSAL6-0.5
Retrosplenial agranular cortex layer 1contraRSAL1-0.5
Retrosplenial agranular cortex layer 2contraRSAL2-0.5
Retrosplenial agranular cortex layer 3contraRSAL3-0.5
Retrosplenial granular cortex layer 5contraRSGL5-0.5
Retrosplenial granular cortex layer 6contraRSGL6-0.5
Retrosplenial granular cortex layer 1contraRSGL1-0.5
Retrosplenial granular cortex layer 2contraRSGL2-0.5
Retrosplenial granular cortex layer 3contraRSGL3-0.5
Retrosplenial granular cortex layer 4contraRSGL4-0.5
White matter of the retrosplenial granular cortexcontraRSGraWM-0.5
Brachium of the inferior colliculusipsibic3
Substantia nigra reticular partipsiSNR2
Laterodorsal tegmental nucleusipsiLDTg-0.5
Pedunculopontine tegmental nucleusipsiPPTg-0.5
Posterior interposed nucleusipsiCERpin0
Medial cerebellar nucleusipsiMed0
Pontomesencephalic grayipsiPoMG-0.5
Principal sensory trigeminal nucleusipsiPr5-0.5
Posterior groupipsiPTG3
Retrosplenial cortexipsiRSCx-0.5
Retrosplenial agranular cortex layer 4ipsiRSAL43
Retrosplenial agranular cortex layer 5ipsiRSAL53
Retrosplenial agranular cortex layer 6ipsiRSAL63
Retrosplenial agranular cortex layer 1ipsiRSAL13
Retrosplenial agranular cortex layer 2ipsiRSAL23
Retrosplenial agranular cortex layer 3ipsiRSAL33
Retrosplenial granular cortex layer 5ipsiRSGL53
Retrosplenial granular cortex layer 6ipsiRSGL63
Retrosplenial granular cortex layer 1ipsiRSGL13
Retrosplenial granular cortex layer 2ipsiRSGL23
Retrosplenial granular cortex layer 3ipsiRSGL33
Retrosplenial granular cortex layer 4ipsiRSGL43
White matter of the retrosplenial granular cortexipsiRSGraWM3
Frontal cortex area 2ipsiFr21
Sensory regionsipsiSR3
Posteromedial barrel subfieldipsiPMBSF2
Secondary visual cortex lateral areaipsiV2L1
Ventral lateral geniculate nucleus ventrolateral partipsiVLGvL2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications