University of Rostock

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Rat connectome



Reticular thalamic nucleus rostral part right


Abbreviation
Rtr
Color       
Superior regionsReticular thalamic nucleus

SynonymsAbbr.Language
Reticular thalamic nucleus rostral partRtrEng
 TRNr 
 RTr 
 NRTr 
Nucleus reticularis thalami rostralis  
Reticular nucleus of the thalamus rostra part  
Thalamic reticular nucleus rostral part  
Rostral reticular nucleus  
Rostral thalamic reticular nucleus  

SubregionsSide
Anterior part of the rostral reticular thalamic nucleusright
Caudal part of reticular thalamic nucleus rostral partright
Dorsal part of reticular thalamic nucleus rostral partright
Dorsolateral part of reticular thalamic nucleus rostral partright
Dorsomedial part of reticular thalamic nucleus rostral partright
Dorsoventral part of reticular thalamic nucleus rostral partright
Inner zone of the rostral part of the reticular thalamic nucleusright
Lateral part of reticular thalamic nucleus rostral partright
Medial lip of the rostral reticular thalamic nucleusright
Medial subdivision of the rostral part of the reticular thalamic nucleusright
Mediolateral part of the rostral reticular thalamic nucleusright
Middle region of the rostral part of the reticular thalamic nucleusright
Most rostral reticular thalamic nucleusright
Outer zone of the rostral part of the reticular thalamic nucleusright
Ventral part of reticular thalamic nucleus rostral partright
Ventrolateral part of reticular thalamic nucleus rostral partright
Reticular thalamic nucleus rostral part external lamellaright
Reticular thalamic nucleus rostral part internal lamellaright
Centromedial part of the rostral reticular thalamic nucleusright

Output to

NameSideAbbr.WeightDetails
Anteromedial thalamic nucleuscontraAM2
Anteroventral thalamic nucleus ventral partcontraAVv2
Central medial thalamic nucleuscontraCM1
Paracentral thalamic nucleuscontraPC0
Parafascicular thalamic nucleuscontraPF0
Parafascicular thalamic nucleus ventrolateral partcontraPFvl1
Rhomboid thalamic nucleuscontraRh3
Reuniens thalamic nucleuscontraRe3
Ventrolateral thalamic nucleus medial partcontraVLme2
Ventromedial thalamic nucleuscontraVM2
Lateral agranular prefrontal cortexcontraAGl1
Ventral tegmental area A10ipsiVTA-10
Diagonal band of BrocaipsiDBB-10
Dorsal thalamusipsiDOR2
Anterior group of the dorsal thalamusipsiATN2
Anterodorsal thalamic nucleusipsiAD2
Anteroventral thalamic nucleusipsiAV2
Anteroventral thalamic nucleus medial part ventral partipsiAVmv3
Ventrolateral part of posterior subdivision of anteroventral thalamic nucleusipsiAVPVL1
Central medial thalamic nucleusipsiCM3
Centrolateral thalamic nucleusipsiCL3
Paracentral thalamic nucleusipsiPC3
Parafascicular thalamic nucleusipsiPF3
Parafascicular thalamic nucleus ventrolateral partipsiPFvl2
Rhomboid thalamic nucleusipsiRh3
Mediodorsal thalamic nucleus central partipsiMDC-10
Mediodorsal thalamic nucleus lateral partipsiMDL2
Mediodorsal thalamic nucleus medial partipsiMDM-10
Midline group of the dorsal thalamusipsiMTN0.5
Paratenial thalamic nucleusipsiPT1.5
Reuniens thalamic nucleusipsiRe3
Reuniens thalamic nucleus dorsomedial partipsiRedm-0.5
Ventrolateral thalamic nucleusipsiVL2
Ventrolateral thalamic nucleus caudoventral partipsiVLCV-0.5
Caudoventral ventrolateral thalamic nucleus medial partipsiVLCVm-0.5
Caudoventral ventrolateral thalamic nucleus lateral partipsiVLCVL-0.5
Intralaminar nucleiipsiILN-0.5
Reticular thalamic nucleus intermediate partipsiRti-10
Reticular thalamic nucleus medial partipsiRtm2
Ventral pallidumipsiVP-0.5
Lateral agranular prefrontal cortexipsiAGl2

Input from

NameSideAbbr.WeightDetails
Substantia nigra reticular part dorsolateral tiercontraSNRDL0.5
Medial vestibular nucleuscontraMVe1
Mediodorsal thalamic nucleuscontraMD-0.5
Reticular thalamic nucleus ventral partcontraRtV1
Lateral agranular prefrontal cortexcontraAGl1
MesencephalonipsiMEC-0.5
Periaqueductal grayipsiPAG-10
Ventrolateral periaqueductal grayipsiVLPAG2
Peduncularpontine nucleusipsiPPN-10
Substantia nigra A9ipsiSN1
Substantia nigra compact partipsiSNC-0.5
Substantia nigra reticular partipsiSNR1
Substantia nigra reticular part dorsolateral tieripsiSNRDL1.5
Substantia nigra reticular part dorsomedial tieripsiSNRDM-0.5
Substantia nigra reticular part medial tieripsiSNRm4
Substantia nigra reticular part rostral tieripsiSNRro2
Substantia nigra reticular part ventral subdivisionipsiSNRv-0.5
Ventral tegmental area A10ipsiVTA-10
Retrorubral nucleusipsiRR-10
Laterodorsal tegmental nucleusipsiLDTg2
Pedunculopontine tegmental nucleusipsiPPTg1
Anterior interposed nucleusipsiAIN3
Posterior interposed nucleusipsiCERpin3
Lateral cerebellar nucleusipsiCERL1
Medial cerebellar nucleusipsiMed0
Superior cerebellar peduncleipsisucep-2
Parabrachial nucleusipsiPB-10
Superior vestibular nucleusipsiSuVe1
Medial vestibular nucleusipsiMVe1
Dorsal raphe nucleusipsiDR-10
Raphe magnus nucleus dorsal partipsiDRMg-10
Endopiriform systemipsiEnN-10
Diagonal band of BrocaipsiDBB-10
Medial septal nucleusipsiMS-10
Substantia innominataipsiSI-10
Preoptic regionipsiPREO-10
Lateral hypothalamic areaipsiLH-10
Lateral hypothalamic nucleusipsiLHN3
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM-10
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]ipsiPaMP-0.5
A8 dopamine cells retrorubral groupipsiRRF-10
ThalamusipsiT3
Dorsal thalamusipsiDOR2
Anterior group of the dorsal thalamusipsiATN2
Anterodorsal thalamic nucleusipsiAD3
Anterodorsal thalamic nucleus caudal partipsiADca3
Anterodorsal thalamic nucleus medial partipsiADMe3
Anteromedial thalamic nucleusipsiAM2
Anteroventral thalamic nucleus ventral partipsiAVv2
Central medial thalamic nucleusipsiCM-0.5
Centre median nucleusipsiCeMe2
Centrolateral thalamic nucleusipsiCL-0.5
Paracentral thalamic nucleusipsiPC-0.5
Parafascicular thalamic nucleusipsiPF2
Parafascicular thalamic nucleus medial partipsiPFM-10
Mediodorsal thalamic nucleus central partipsiMDC-10
Mediodorsal thalamic nucleus lateral partipsiMDL2
Mediodorsal thalamic nucleus medial partipsiMDM-10
Midline group of the dorsal thalamusipsiMTN2
Ventral posterolateral thalamic nucleusipsiVPL3
Intralaminar nucleiipsiILN2
Parafascicular centre-median complexipsiPFCM-10
Lateral posterior thalamic nucleusipsiLP3
Reticular thalamic nucleusipsiRt0
Reticular thalamic nucleus ventral partipsiRtV2
Zona incertaipsiZI3
Zona incerta rostral partipsiZIR2
Zona incerta ventral partipsiZIV2
Lateral habenular nucleusipsiLHb3
Amygdaloid complexipsiAC3
Bed nucleus of the stria terminalisipsiBST-10
Cortical amygdaloid nucleusipsiCAn-10
Medial amygdaloid nucleusipsiMe-10
Globus pallidusipsiGP2
Medial globus pallidusipsiMGP-10
Ventral pallidumipsiVP3
Ventral pallidum caudal partipsiVPc-10
Ventral pallidum dorsolateral partipsiVPdl-10
Ventral pallidum lateral partipsiVPlp-10
Ventral pallidum medial partipsiVPm-10
Ventral pallidum rostral partipsiVPr-10
Ventral pallidum rostromedial partipsiVPrm1
Ventral pallidum ventromedial partipsiVPvm-10
Accumbens nucleus coreipsiAcbC-10
Caudate putamenipsiCPu-10
Subthalamic nucleusipsiSTh-10
Piriform cortexipsiPir-10
Retrosplenial cortex rostrocaudalipsiRSrc-0.5
Retrosplenial agranular cortexipsiRSA3
Retrosplenial agranular cortex layer 5ipsiRSAL52
Retrosplenial agranular cortex layer 6ipsiRSAL62
Retrosplenial granular cortex layersipsiRSGL3
Cingulate cortexipsiCg3
Anterior cingulate cortex anterior part layer 5ipsiACCaL53
Anterior cingulate cortex layer 6ipsiACCL63
Cingulate cortex area 1ipsiCg13
Cingulate cortex area 2ipsiCg23
Cingulate cortex layer 5ipsiCgL52
Cingulate cortex layer 6ipsiCgL62
Prelimbic cortexipsiPrL-10
Infralimbic cortexipsiIL3
Frontal association cortexipsiFrA3
Frontal association cortex layer 5ipsiFrALL52
Frontal association cortex layer 6ipsiFrALL62
Frontal cortex area 2ipsiFr23
Lateral agranular prefrontal cortexipsiAGl2
Hindlimb motor cortexipsiHMCx3
Medial prefrontal cortex layer 6ipsimPFCL6-0.5
Medial agranular prefrontal cortex layer 5ipsiAGmL51
Medial agranular prefrontal cortex layer 6ipsiAGmL62
Orbital cortexipsiOrC3
Intergeniculate leafipsiIGL-10
Lateral septal nucleusipsiLS-10

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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